Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0449500-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:22396531:22401800:-1 gene:Os04g0449500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0818E04.12 protein. (Os04t0449500-01)
Sequence	ATGGACAAGGTGAAGGCGTGGGCGGGGGCCAACTACGCGGAGCCCATGGGGTCGGTGGAG CAGTCGCTGCGCGTCGCGTACGTGGTCCTCTCCTTCTGCGCCGCCTTCTTCCTCGGCGGC ATCAAAGCGGCGGTCGTCGGCCCGGTGGCGGCGGCGCTGATGGTGCTGGGCAACGTCGGC GTGATACTCCTCCTCTTCCCGGCGCACGTCTGGTGGACCATTTACTCCCTCATCAAGACT GAACGCATCAACGCCGGCCTGAAACTAGCGGTGCTCATCGCGCTGCCGGTGCTGTTCGGC CTCTGGCTGGGGCTGGGCATCTTCGGGAGCGCGCTGGTCGCCCTCGGCTATGGCTTCTTC ACGCCGTGGATCGCCACCTTCGAGGCGTTCAGGCAGGAGAGCGAGTCCAAGAAGTTCGTG CATGGCGTCGTGGACGGGACGTGGGGGACGATTAAAGGCAGCTGCACGGTGGTTAGGGAC TTTGCGGATTTATGCTTCCACTCGTATCCTGTTTATCTGAAGGAGCTGCGCGAAAGCTCG CAGAATTGCGAGCCCCATTCCATCAGGGTGTTGGATGTGCCCTCATGTATAGCTGTTGGT CTCTTGGGATTAATCGTTGACATTCCGCTCTACACCGTAATTGCGCTGATAAAGAGCCCC TATATGCTCTTCAAAGGTTGGCAGAGGCTGCTTCATGACCTTATAAGCCGCGAAGGTCCA TTCCTTGAGACAGTTTGTGTGCCGATCGCTGGCCTGGCTATCCTTTTCTGGCCTCTGGTG GTTGTTGGGAGTGTCCTACTAGCTATCGTCTCGAGCATTTTTGTGGGTCTCTACGGAGCA GTCGTTGTCTACCAGGAGAAGTCGTTCCAGAGGGGAGTTTCTTATGTGGTTGCCATGGTT GCGGAATTTGACGAGTACACCAATGACTGGCTTTATCTCCGGGAAGGGACAGTTCTTCCG AAGCCTTCCTACCGTAAGAGAAAATCGTCCAGTTCCACGGAGTTTTCAGTCAGAACGAAT GCTTCTGTTAAAGGAGGCGACCAACCTAGTTCCAATGAAGCTCCAGCAATGCTGGTTCCA ACTTTGGCCCCAGCAAGGTCAGTTAGAGAGGCCATACAGGAAGTCAAAATGGTCCAGATA TGGGAAAATATGATGAAGAATTGTGAACTGAGGGGCAGGGATCTTCTGAATTTAAACGTC ATAACAACTGTTGATCTTACTGAATGGTTACGAACAAAGGAAAGTGGGCATGAAGCAATA GGACTGGGAGTACCTTCTTATTCTCTGCTGTGTATGATCCTCCATTCGATCAAGGCCGGT TCTGGAGGGCTATTGATAGGCAATGGCATCGAAATCAATCAATATAACCGCCCCCAAGAT CGGTTGATAGACTGGTTCTTGCACCCTGTGCTGGTGCTGAAAGATCAAATACAAGCGCTG AAAATGACGGAGGAAGAAGTGAGGTTCTTGGAGAAGCTGACCCTTTTCATTGGTAATTCT GAGAGGGCAAATGGGTGGGATAATGGTGCTGAAATCCCCCAAGATCCTGTAAGGGCAGGA CAGATCCAGGCCATCAGTAGAAGGTTGGTTGGAATTGTAAGGAGCATGTCAAAGTTTCCT ACGTACAGGAGGAGACACAGGCACGTCATGAAACTGCTCGTCACGTACTCCGTCGAGAAG GAAGGGTCGTTCAGATCATCCGCGTCGAATCGATCAGTACCTATCTTTGAGATAACGCAA TTGGAAGTGTAA

Peptide Sequence

PEP ID	Os04t0449500-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:22396531:22401800:-1 gene:Os04g0449500 transcript:Os04t0449500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0818E04.12 protein. (Os04t0449500-01)
Sequence	MDKVKAWAGANYAEPMGSVEQSLRVAYVVLSFCAAFFLGGIKAAVVGPVAAALMVLGNVG VILLLFPAHVWWTIYSLIKTERINAGLKLAVLIALPVLFGLWLGLGIFGSALVALGYGFF TPWIATFEAFRQESESKKFVHGVVDGTWGTIKGSCTVVRDFADLCFHSYPVYLKELRESS QNCEPHSIRVLDVPSCIAVGLLGLIVDIPLYTVIALIKSPYMLFKGWQRLLHDLISREGP FLETVCVPIAGLAILFWPLVVVGSVLLAIVSSIFVGLYGAVVVYQEKSFQRGVSYVVAMV AEFDEYTNDWLYLREGTVLPKPSYRKRKSSSSTEFSVRTNASVKGGDQPSSNEAPAMLVP TLAPARSVREAIQEVKMVQIWENMMKNCELRGRDLLNLNVITTVDLTEWLRTKESGHEAI GLGVPSYSLLCMILHSIKAGSGGLLIGNGIEINQYNRPQDRLIDWFLHPVLVLKDQIQAL KMTEEEVRFLEKLTLFIGNSERANGWDNGAEIPQDPVRAGQIQAISRRLVGIVRSMSKFP TYRRRHRHVMKLLVTYSVEKEGSFRSSASNRSVPIFEITQLEV

Transcript Sequence

Transcript ID	Os04t0449500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:22396531:22401800:-1 gene:Os04g0449500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0818E04.12 protein. (Os04t0449500-01)
Sequence	CTCGAACACACCCTTACTTCTGTCCCCTTCTCTGAGTCTGCTCTGCTCGTCCCCAAGAAC ACGATTCAGCGACGCGCGCGCAACAGTGCCGCCGCGGCCGCCGGCAGGTTTGACCCATCC AAAGCCAACCCCCAAACCGACGAATCAATCAAGAACCCCCCCGAATCTAAAATCTTTCTT TAAGAGCTCTCCCTCCCCTGGAGCGGCTTCTCCCGCAAGCCGCTGAATTTTTCCACCACC ACCGGTCGTCGCGGATTCCCGCGACAGCCAGCCAGCGAGGACGCGCGCTTTCTTTTTCTT CTTTGTTTTTCCCTCGTCCTCTCCGTCCGGCTGCAGAAAAGCTTCCATCTCTCTGAAGCT GTCCTTGATTCTTGCGGAGGTAGACAGGCAGGTGTAGTCCTTTGTGTGCCCGTGCGTATA TGTGAGCGAGTGCTACCGGGCGCGTCGACGCCGGCGACGAACGAACGATCGATTCGATTC GACTCGATGGACAAGGTGAAGGCGTGGGCGGGGGCCAACTACGCGGAGCCCATGGGGTCG GTGGAGCAGTCGCTGCGCGTCGCGTACGTGGTCCTCTCCTTCTGCGCCGCCTTCTTCCTC GGCGGCATCAAAGCGGCGGTCGTCGGCCCGGTGGCGGCGGCGCTGATGGTGCTGGGCAAC GTCGGCGTGATACTCCTCCTCTTCCCGGCGCACGTCTGGTGGACCATTTACTCCCTCATC AAGACTGAACGCATCAACGCCGGCCTGAAACTAGCGGTGCTCATCGCGCTGCCGGTGCTG TTCGGCCTCTGGCTGGGGCTGGGCATCTTCGGGAGCGCGCTGGTCGCCCTCGGCTATGGC TTCTTCACGCCGTGGATCGCCACCTTCGAGGCGTTCAGGCAGGAGAGCGAGTCCAAGAAG TTCGTGCATGGCGTCGTGGACGGGACGTGGGGGACGATTAAAGGCAGCTGCACGGTGGTT AGGGACTTTGCGGATTTATGCTTCCACTCGTATCCTGTTTATCTGAAGGAGCTGCGCGAA AGCTCGCAGAATTGCGAGCCCCATTCCATCAGGGTGTTGGATGTGCCCTCATGTATAGCT GTTGGTCTCTTGGGATTAATCGTTGACATTCCGCTCTACACCGTAATTGCGCTGATAAAG AGCCCCTATATGCTCTTCAAAGGTTGGCAGAGGCTGCTTCATGACCTTATAAGCCGCGAA GGTCCATTCCTTGAGACAGTTTGTGTGCCGATCGCTGGCCTGGCTATCCTTTTCTGGCCT CTGGTGGTTGTTGGGAGTGTCCTACTAGCTATCGTCTCGAGCATTTTTGTGGGTCTCTAC GGAGCAGTCGTTGTCTACCAGGAGAAGTCGTTCCAGAGGGGAGTTTCTTATGTGGTTGCC ATGGTTGCGGAATTTGACGAGTACACCAATGACTGGCTTTATCTCCGGGAAGGGACAGTT CTTCCGAAGCCTTCCTACCGTAAGAGAAAATCGTCCAGTTCCACGGAGTTTTCAGTCAGA ACGAATGCTTCTGTTAAAGGAGGCGACCAACCTAGTTCCAATGAAGCTCCAGCAATGCTG GTTCCAACTTTGGCCCCAGCAAGGTCAGTTAGAGAGGCCATACAGGAAGTCAAAATGGTC CAGATATGGGAAAATATGATGAAGAATTGTGAACTGAGGGGCAGGGATCTTCTGAATTTA AACGTCATAACAACTGTTGATCTTACTGAATGGTTACGAACAAAGGAAAGTGGGCATGAA GCAATAGGACTGGGAGTACCTTCTTATTCTCTGCTGTGTATGATCCTCCATTCGATCAAG GCCGGTTCTGGAGGGCTATTGATAGGCAATGGCATCGAAATCAATCAATATAACCGCCCC CAAGATCGGTTGATAGACTGGTTCTTGCACCCTGTGCTGGTGCTGAAAGATCAAATACAA GCGCTGAAAATGACGGAGGAAGAAGTGAGGTTCTTGGAGAAGCTGACCCTTTTCATTGGT AATTCTGAGAGGGCAAATGGGTGGGATAATGGTGCTGAAATCCCCCAAGATCCTGTAAGG GCAGGACAGATCCAGGCCATCAGTAGAAGGTTGGTTGGAATTGTAAGGAGCATGTCAAAG TTTCCTACGTACAGGAGGAGACACAGGCACGTCATGAAACTGCTCGTCACGTACTCCGTC GAGAAGGAAGGGTCGTTCAGATCATCCGCGTCGAATCGATCAGTACCTATCTTTGAGATA ACGCAATTGGAAGTGTAATTGAAAGTTGAAACCATATTCAGAAATCAGAGTCAGATAGGT CCCTTCTTCAAATGGTCTTCTTTCTTCAGTAAATATCGCACGCCGTTTTGTCAGTGCTTG TGTTTCCCCAAATCTAGGAGGTTTTGTATAGCTTTATTTTTTTTACAAGGAGAGAGATGC CTCACTCCAGAACTTCTCGCTGTGAGATTCATTTGCCAAAACTGCAGGCATGAATGAATC ATCCATTGTACATTTGTATTGTAAATTCTGTACATACTCCTTGATCAGATCAGATACACA TGCATGTTGGTTCTTTTACCTTTTGC