Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0449200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:22385360:22387707:-1 gene:Os04g0449200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan fucosyltransferase family protein. (Os04t0449200-01)
Sequence	ATGAGTCCTCGGGTCAGAATGTCGGTGGCGCGGTGGCTGCCAAGCAGCCCAGCGCACGGC AAGACCAAGAGCCGGCGCTCGTCGTCGGCCGTGCGCCCGACGCTGCTGGTGATCGCGGTG ACCGTGATTGCCGTGCTGCTCGTCGCCGTCGTCTTCGGCGGCGCCGGCCGGTGGACGCTC TCCGGCGGCGGGGACACCAGCTGGGTCTCCGCCGGAGCCCGCGTCGTCATCAACGCCGTG TCCGGCCAACAACGCGACGGCGACGATCCCGTCGCGGCGGCGGTGGAGCCGCGGAACGAC AGGCTCCTGGGTGGCCTCCTCTCGCCGGACTTCGACGACAGCTCCTGCCTCAGCCGCTAC CGCGCCGGGCTCTACCGCCGGCAGTCCCCCCACGCTGTCTCGCCGCACCTGGTCGCCTCA CTCCGACGCTACGAGTCCATCCACCGCCGCTGCGGCCCCGGCACCTCCGCCTACGAGCGC GCCGTGGAGCGCCTCCGCTCCCCGCCGCCGTCGAACACCTCCGACGCCGAGTGCAGGTAC CTCGTGTGGACGCCGCTCGAGGGGCTCGGCAACCGCATGCTCACGCTCACGTCGGCTTTC CTCTATGCGCTCCTCACCGACCGCGTCCTCCTCTTCCACCACCCCGCCGGCGAAGGCCTC AGGGACCTCTTCTGCGAGCCGTTCCCGGGCTCCACGTGGACGCTCCCGGAGGGGGACTTC CCGTTCTCCGGCATGCAGGGCTTCAACGCGCGCACCCGCGAGAGCCTCGGGAACGCGCTG CGGCGCGGCGAGGGCGCCGCCAAGGACCACCCGCCGCCGCCGCCGCCGTGGATGTACGTG CACCTGCGGCACGACTACAACCGCAACGCCAACGACCCGCGCTTCTTCTGCGACGACGGG CAGGACGCGCTGCGGCGCGTCGGCTGGGTGGTGCTCCTCTCCGACAACTACTTCGTGCCC GGGCTGTTCCTGGTCCCGCGGTTCGAGCGCGCGCTGTCGCGGATGCTGCCGCGCCGCGAC GCCGCGTTCCACCACCTCGGCCGCTACCTGCTCCACCCGAGCAACACGGTGTGGGGGATG GTGGCGCGGTACCACGCCTCGTACATGGCCTGCGCCAACGAGCGCGTCGGCATCCAGGTG CGCTCCTTCTACTGGGCGCGCATCTCCACCGACGAGCTCTACGGCCAGATCATGTCGTGC GCGCACGGCGAGAACATCCTCCCCCGCGTGACGCAGCAGGGGCCCAACTTCACCGCCGCC GGAGACCAGCCGCAGCCGGCGGCGCGGCCGGGGAGGCGCAAGGCGGTGCTCGTGGTGTCG CTGCACGGCGCCTACTCCGAGAGGATCAAGGACCTGTACTACGAGCACGGCGCGGCGGGC GGGGAGTCCGTGAGCGTGTTCCAGCCGACGCACCTGGACCGGCAGCGCTCCGGCGAGCAG CTGCACAACCAGAAGGCGCTCGCCGAGATGATGCTGCTGAGCTTCTCCGACGTGGTGGTC ACGTCCGCCGCCTCGACGTTCGGGTACGTCGGCCACGGGCTCGCCGGGCTGAGGCCGTGG GTGCTCATGAGCCCCCTCGACAAGAAGGTGCCTGACCCGCCGTGCCGGCTGGCCGCCACC ATCGAGCCGTGCTTCCATAACCCACCAAACTACGACTGCCGGACGAGGGCCAAAGGCGAC ACCGGCAAGATTGTCCGGCACATCCGGCACTGCGAGGACTTCGAGAATGGCGTTCAGTTA GTGGACTGA

Peptide Sequence

PEP ID	Os04t0449200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:22385360:22387707:-1 gene:Os04g0449200 transcript:Os04t0449200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan fucosyltransferase family protein. (Os04t0449200-01)
Sequence	MSPRVRMSVARWLPSSPAHGKTKSRRSSSAVRPTLLVIAVTVIAVLLVAVVFGGAGRWTL SGGGDTSWVSAGARVVINAVSGQQRDGDDPVAAAVEPRNDRLLGGLLSPDFDDSSCLSRY RAGLYRRQSPHAVSPHLVASLRRYESIHRRCGPGTSAYERAVERLRSPPPSNTSDAECRY LVWTPLEGLGNRMLTLTSAFLYALLTDRVLLFHHPAGEGLRDLFCEPFPGSTWTLPEGDF PFSGMQGFNARTRESLGNALRRGEGAAKDHPPPPPPWMYVHLRHDYNRNANDPRFFCDDG QDALRRVGWVVLLSDNYFVPGLFLVPRFERALSRMLPRRDAAFHHLGRYLLHPSNTVWGM VARYHASYMACANERVGIQVRSFYWARISTDELYGQIMSCAHGENILPRVTQQGPNFTAA GDQPQPAARPGRRKAVLVVSLHGAYSERIKDLYYEHGAAGGESVSVFQPTHLDRQRSGEQ LHNQKALAEMMLLSFSDVVVTSAASTFGYVGHGLAGLRPWVLMSPLDKKVPDPPCRLAAT IEPCFHNPPNYDCRTRAKGDTGKIVRHIRHCEDFENGVQLVD

Transcript Sequence

Transcript ID	Os04t0449200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:22385360:22387707:-1 gene:Os04g0449200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan fucosyltransferase family protein. (Os04t0449200-01)
Sequence	GTCGTTTCGGGGTTGCCACAATGAAGCTAGCGCGATGAGTCCTCGGGTCAGAATGTCGGT GGCGCGGTGGCTGCCAAGCAGCCCAGCGCACGGCAAGACCAAGAGCCGGCGCTCGTCGTC GGCCGTGCGCCCGACGCTGCTGGTGATCGCGGTGACCGTGATTGCCGTGCTGCTCGTCGC CGTCGTCTTCGGCGGCGCCGGCCGGTGGACGCTCTCCGGCGGCGGGGACACCAGCTGGGT CTCCGCCGGAGCCCGCGTCGTCATCAACGCCGTGTCCGGCCAACAACGCGACGGCGACGA TCCCGTCGCGGCGGCGGTGGAGCCGCGGAACGACAGGCTCCTGGGTGGCCTCCTCTCGCC GGACTTCGACGACAGCTCCTGCCTCAGCCGCTACCGCGCCGGGCTCTACCGCCGGCAGTC CCCCCACGCTGTCTCGCCGCACCTGGTCGCCTCACTCCGACGCTACGAGTCCATCCACCG CCGCTGCGGCCCCGGCACCTCCGCCTACGAGCGCGCCGTGGAGCGCCTCCGCTCCCCGCC GCCGTCGAACACCTCCGACGCCGAGTGCAGGTACCTCGTGTGGACGCCGCTCGAGGGGCT CGGCAACCGCATGCTCACGCTCACGTCGGCTTTCCTCTATGCGCTCCTCACCGACCGCGT CCTCCTCTTCCACCACCCCGCCGGCGAAGGCCTCAGGGACCTCTTCTGCGAGCCGTTCCC GGGCTCCACGTGGACGCTCCCGGAGGGGGACTTCCCGTTCTCCGGCATGCAGGGCTTCAA CGCGCGCACCCGCGAGAGCCTCGGGAACGCGCTGCGGCGCGGCGAGGGCGCCGCCAAGGA CCACCCGCCGCCGCCGCCGCCGTGGATGTACGTGCACCTGCGGCACGACTACAACCGCAA CGCCAACGACCCGCGCTTCTTCTGCGACGACGGGCAGGACGCGCTGCGGCGCGTCGGCTG GGTGGTGCTCCTCTCCGACAACTACTTCGTGCCCGGGCTGTTCCTGGTCCCGCGGTTCGA GCGCGCGCTGTCGCGGATGCTGCCGCGCCGCGACGCCGCGTTCCACCACCTCGGCCGCTA CCTGCTCCACCCGAGCAACACGGTGTGGGGGATGGTGGCGCGGTACCACGCCTCGTACAT GGCCTGCGCCAACGAGCGCGTCGGCATCCAGGTGCGCTCCTTCTACTGGGCGCGCATCTC CACCGACGAGCTCTACGGCCAGATCATGTCGTGCGCGCACGGCGAGAACATCCTCCCCCG CGTGACGCAGCAGGGGCCCAACTTCACCGCCGCCGGAGACCAGCCGCAGCCGGCGGCGCG GCCGGGGAGGCGCAAGGCGGTGCTCGTGGTGTCGCTGCACGGCGCCTACTCCGAGAGGAT CAAGGACCTGTACTACGAGCACGGCGCGGCGGGCGGGGAGTCCGTGAGCGTGTTCCAGCC GACGCACCTGGACCGGCAGCGCTCCGGCGAGCAGCTGCACAACCAGAAGGCGCTCGCCGA GATGATGCTGCTGAGCTTCTCCGACGTGGTGGTCACGTCCGCCGCCTCGACGTTCGGGTA CGTCGGCCACGGGCTCGCCGGGCTGAGGCCGTGGGTGCTCATGAGCCCCCTCGACAAGAA GGTGCCTGACCCGCCGTGCCGGCTGGCCGCCACCATCGAGCCGTGCTTCCATAACCCACC AAACTACGACTGCCGGACGAGGGCCAAAGGCGACACCGGCAAGATTGTCCGGCACATCCG GCACTGCGAGGACTTCGAGAATGGCGTTCAGTTAGTGGACTGAGCTTTGTTCCATTTTCT TGCCTAGTTGCCTGGATGTTCTCATGGTTCATTTCTGCTGAGTGTTTACATCTTACAGCA GTAAGAAAACTGAAAACTATAAACTGCTGTTATTATAGCGTATAAAGGTCGATAACATTT ACTGAACTGTAATAAGTAGTTGCCAAATGCCAACCGTGCGTTGCACTACAATTTCATTAT TAATGTTGTAAAAGAGGTTGTTTTTTTTAAGTTGCCCTTTTTTCCCTTATCACATTGAGA AGTATGAAAAGTATTTTCATCCTTAG