Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0448900-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:22369763:22376615:1 gene:Os04g0448900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZEAXANTHIN EPOXIDASE 1 description:Similar to Zeaxanthin epoxidase. (Os04t0448900-00)
Sequence	ATGGCGCTCCTCTCCGCGACCGCCCCCGCCAAGACGCGCTTCTCGCTCTTCTCCCACGAG GAGGCGCAGCACCCGCACCCGCACGCGCTCTCGGCGTGCTGCGGCGGCGGCGCCAGCGGC AAGAGGCAGCGGGCGCGGGCCAGGGTGGCGGCGGCAATGCGGCCGGCGGACGCGGCCGCC TCCGTCGCGCAGGCGGCGTCGCCGGGCGGCGGCGGCGAGGGCACGCGGAGGCCGCGGGTG CTCGTGGCCGGCGGCGGCATCGGGGGGCTGGTGCTGGCGCTGGCGGCGAGGCGGAAGGGG TACGAGGTGACGGTGTTCGAGCGCGACATGAGCGCGGTGCGCGGCGAGGGGCAGTACCGC GGGCCGATACAGATCCAGAGCAACGCGCTCGCGGCGCTGGAGGCCATCGACATGTCCGTC GCCGAGGAGGTCATGCGCGAAGGCTGCGTCACCGGCGACCGCATCAACGGCCTCGTCGAC GGCATCTCCGGCTCCTGGTACATCAAGTTTGATACATTTACTCCTGCAGCTGAGCGAGGT CTCCCAGTTACAAGGGTTATTAGCCGAATGACGCTGCAGCAGATTCTTGCTCGTGCGGTT GGTGATGATGCTATACTGAACGATAGCCATGTTGTTGATTTCATAGATGATGGCAACAAG GTAACTGCAATTTTGGAGGATGGCCGGAAATTTGAAGGTGACCTTTTGGTTGGTGCTGAT GGAATATGGTCAAAGGTGAGGAAGGTGCTTTTCGGGCAATCAGAAGCAACTTATTCAGAA TATACTTGCTACACTGGCATTGCAGACTTTGTGCCTCCTGACATTGACACAGTTGGGTAC CGTGTATTTCTTGGTCACAAACAATATTTCGTCTCCTCAGATGTCGGTGCTGGAAAAATG CAGTGGTATGCATTTCATAAGGAACCTGCTGGTGGCACTGATCCTGAAAATGGTAAAAAT AAAAGATTGCTCGAGATATTTAATGGTTGGTGCGATAACGTCGTTGATCTGATAAATGCA ACTGATGAGGAAGCAATTCTTCGCCGGGATATATATGACCGACCACCTACTTTTAACTGG GGAAAAGGTCGTGTCACTTTGCTAGGTGACTCTGTACATGCTATGCAGCCAAATCTGGGT CAAGGTGGCTGCATGGCTATTGAGGATGGTTACCAGCTGGCTGTAGAACTTGAGAAGTCC TGGCAGGAGAGTGCGAAGTCTGGAACTCCTATGGATATAGTTTCCTCCTTGAGGAGATAT GAGAAGGAGAGAATACTACGTGTTTCTGTTATACATGGGTTGGCAAGAATGGCAGCAATC ATGGCTACCACTTATAGACCATACTTGGGTGTGGGTCTGGGACCATTGTCGTTTTTAACG AAGTTGAGGATACCACATCCTGGAAGAGTTGGTGGGAGATTCTTCATCAAGTATGGAATG CCTTTGATGTTGAGCTGGGTTCTAGGAGGAAACAGCACGAAGTTAGAAGGAAGACCGTTA AGCTGTAGGCTTTCTGACAAGGCAAACGACCAGCTTCGTCGATGGTTTGAGGATGACGAT GCATTGGAACAAGCCATGGGTGGAGAGTGGTACCTCCTCCCCACAAGTTCTGGAGACTCG CAACCCATTCGATTAATCAGGGATGAAAAAAAGTCACTCTCCATTGGAAGCCGGTCAGAT CCCAGCAATTCGACTGCTTCCCTGGCATTGCCCTTGCCACAGATATCAGAAAACCATGCT ACTATCACATGCAAGAATAAGGCCTTTTATGTGACTGATAATGGAAGTGAACATGGTACA TGGATTACCGACAACGAAGGTAGACGCTATCGCGTACCTCCGAACTTCCCTGTCCGTTTC CATCCCTCGGATGCCATTGAGTTTGGTTCAGATAAAAAGGCCGTGTTCCGTGTGAAGGTG CTGAGCACGCTCCCATATGAATCTGCAAGAGGAGGGCCGCAAATCCTGCAGGCAGCATGA

Peptide Sequence

PEP ID	Os04t0448900-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:22369763:22376615:1 gene:Os04g0448900 transcript:Os04t0448900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZEAXANTHIN EPOXIDASE 1 description:Similar to Zeaxanthin epoxidase. (Os04t0448900-00)
Sequence	MALLSATAPAKTRFSLFSHEEAQHPHPHALSACCGGGASGKRQRARARVAAAMRPADAAA SVAQAASPGGGGEGTRRPRVLVAGGGIGGLVLALAARRKGYEVTVFERDMSAVRGEGQYR GPIQIQSNALAALEAIDMSVAEEVMREGCVTGDRINGLVDGISGSWYIKFDTFTPAAERG LPVTRVISRMTLQQILARAVGDDAILNDSHVVDFIDDGNKVTAILEDGRKFEGDLLVGAD GIWSKVRKVLFGQSEATYSEYTCYTGIADFVPPDIDTVGYRVFLGHKQYFVSSDVGAGKM QWYAFHKEPAGGTDPENGKNKRLLEIFNGWCDNVVDLINATDEEAILRRDIYDRPPTFNW GKGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKSWQESAKSGTPMDIVSSLRRY EKERILRVSVIHGLARMAAIMATTYRPYLGVGLGPLSFLTKLRIPHPGRVGGRFFIKYGM PLMLSWVLGGNSTKLEGRPLSCRLSDKANDQLRRWFEDDDALEQAMGGEWYLLPTSSGDS QPIRLIRDEKKSLSIGSRSDPSNSTASLALPLPQISENHATITCKNKAFYVTDNGSEHGT WITDNEGRRYRVPPNFPVRFHPSDAIEFGSDKKAVFRVKVLSTLPYESARGGPQILQAA

Transcript Sequence

Transcript ID	Os04t0448900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:22369763:22376615:1 gene:Os04g0448900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZEAXANTHIN EPOXIDASE 1 description:Similar to Zeaxanthin epoxidase. (Os04t0448900-00)
Sequence	CGCGAAGAGCTTCACCTGACTCTCGCTTGACGTGCTAGTTAGTAGTAGCTCTCGATCGAG GCGCGGTCGTCCGTCGAGGGCGCGTGGCCATGGCGCTCCTCTCCGCGACCGCCCCCGCCA AGACGCGCTTCTCGCTCTTCTCCCACGAGGAGGCGCAGCACCCGCACCCGCACGCGCTCT CGGCGTGCTGCGGCGGCGGCGCCAGCGGCAAGAGGCAGCGGGCGCGGGCCAGGGTGGCGG CGGCAATGCGGCCGGCGGACGCGGCCGCCTCCGTCGCGCAGGCGGCGTCGCCGGGCGGCG GCGGCGAGGGCACGCGGAGGCCGCGGGTGCTCGTGGCCGGCGGCGGCATCGGGGGGCTGG TGCTGGCGCTGGCGGCGAGGCGGAAGGGGTACGAGGTGACGGTGTTCGAGCGCGACATGA GCGCGGTGCGCGGCGAGGGGCAGTACCGCGGGCCGATACAGATCCAGAGCAACGCGCTCG CGGCGCTGGAGGCCATCGACATGTCCGTCGCCGAGGAGGTCATGCGCGAAGGCTGCGTCA CCGGCGACCGCATCAACGGCCTCGTCGACGGCATCTCCGGCTCCTGGTACATCAAGTTTG ATACATTTACTCCTGCAGCTGAGCGAGGTCTCCCAGTTACAAGGGTTATTAGCCGAATGA CGCTGCAGCAGATTCTTGCTCGTGCGGTTGGTGATGATGCTATACTGAACGATAGCCATG TTGTTGATTTCATAGATGATGGCAACAAGGTAACTGCAATTTTGGAGGATGGCCGGAAAT TTGAAGGTGACCTTTTGGTTGGTGCTGATGGAATATGGTCAAAGGTGAGGAAGGTGCTTT TCGGGCAATCAGAAGCAACTTATTCAGAATATACTTGCTACACTGGCATTGCAGACTTTG TGCCTCCTGACATTGACACAGTTGGGTACCGTGTATTTCTTGGTCACAAACAATATTTCG TCTCCTCAGATGTCGGTGCTGGAAAAATGCAGTGGTATGCATTTCATAAGGAACCTGCTG GTGGCACTGATCCTGAAAATGGTAAAAATAAAAGATTGCTCGAGATATTTAATGGTTGGT GCGATAACGTCGTTGATCTGATAAATGCAACTGATGAGGAAGCAATTCTTCGCCGGGATA TATATGACCGACCACCTACTTTTAACTGGGGAAAAGGTCGTGTCACTTTGCTAGGTGACT CTGTACATGCTATGCAGCCAAATCTGGGTCAAGGTGGCTGCATGGCTATTGAGGATGGTT ACCAGCTGGCTGTAGAACTTGAGAAGTCCTGGCAGGAGAGTGCGAAGTCTGGAACTCCTA TGGATATAGTTTCCTCCTTGAGGAGATATGAGAAGGAGAGAATACTACGTGTTTCTGTTA TACATGGGTTGGCAAGAATGGCAGCAATCATGGCTACCACTTATAGACCATACTTGGGTG TGGGTCTGGGACCATTGTCGTTTTTAACGAAGTTGAGGATACCACATCCTGGAAGAGTTG GTGGGAGATTCTTCATCAAGTATGGAATGCCTTTGATGTTGAGCTGGGTTCTAGGAGGAA ACAGCACGAAGTTAGAAGGAAGACCGTTAAGCTGTAGGCTTTCTGACAAGGCAAACGACC AGCTTCGTCGATGGTTTGAGGATGACGATGCATTGGAACAAGCCATGGGTGGAGAGTGGT ACCTCCTCCCCACAAGTTCTGGAGACTCGCAACCCATTCGATTAATCAGGGATGAAAAAA AGTCACTCTCCATTGGAAGCCGGTCAGATCCCAGCAATTCGACTGCTTCCCTGGCATTGC CCTTGCCACAGATATCAGAAAACCATGCTACTATCACATGCAAGAATAAGGCCTTTTATG TGACTGATAATGGAAGTGAACATGGTACATGGATTACCGACAACGAAGGTAGACGCTATC GCGTACCTCCGAACTTCCCTGTCCGTTTCCATCCCTCGGATGCCATTGAGTTTGGTTCAG ATAAAAAGGCCGTGTTCCGTGTGAAGGTGCTGAGCACGCTCCCATATGAATCTGCAAGAG GAGGGCCGCAAATCCTGCAGGCAGCATGAACGAGAGACTTCAGTCAGCCATGGCTGCTGT CATCACTCATCAGCTACTGTACAGCATCCAGTAAAACACAGTGAATTTTGCACTAAAATG CAGGTTCCACTTCCAGACAGGATTTTGAATAGCTTTCTCTGACGGATTGAAATTGCAGTT CTCCATACAGAAACTGAGGTGTAC