Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0448500-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:22353813:22355207:1 gene:Os04g0448500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aspartic protease 37, E. coli cation transport protein ChaC homolog description:Peptidase A1 domain containing protein. (Os04t0448500-00)
Sequence	ATGAACGCCGCCGTGTTGCTGCTGCTCCTCGCGCTCGCCGCCCTCCCGGCGTCGTGCGCG CCGCCGAGATCCTTCCGCCTCGAGCTCGCCAGCGTCGACGCCTCGGCAGCCGACGCCGCC AACCTCACGGAGCATGAGCTCCTGCGGCGCGCCATCCAGCGCAGCCGGTACCGGTTGGCC GGCATCGGCATGGCGCGCGGCGAGGCGGCCAGCGCGCGCAAGGCCGTCGTGGCCGAGACG CCCATCATGCCGGCCGGCGGCGAGTACCTGGTGAAGCTCGGCATCGGCACGCCGCCGTAC AAGTTCACGGCGGCCATAGACACCGCCAGCGACCTCATCTGGACGCAGTGCCAGCCCTGC ACCGGCTGCTACCACCAGGTCGACCCCATGTTCAACCCCAGGGTGTCCTCCACCTACGCC GCGCTGCCGTGCAGCAGCGACACGTGCGACGAGCTGGACGTGCACCGGTGCGGCCACGAC GACGACGAGTCGTGCCAGTACACCTACACGTACAGCGGCAACGCCACGACGGAGGGCACC CTGGCCGTCGACAAGCTGGTCATCGGCGAGGACGCGTTCCGCGGCGTCGCCTTCGGCTGC AGCACCTCCAGCACCGGCGGCGCCCCGCCACCGCAGGCGTCCGGTGTGGTCGGCCTCGGC CGCGGCCCACTCTCGCTGGTGTCCCAGCTCTCTGTGCGGAGGTTCGCCTACTGCCTGCCC CCGCCGGCGTCGAGGATCCCCGGGAAGCTCGTCCTCGGCGCCGACGCCGACGCCGCCCGC AACGCCACCAACCGGATCGCCGTCCCGATGAGACGGGACCCGCGGTACCCGTCCTACTAC TACCTCAACCTCGACGGCCTGCTCATCGGCGACAGGGCGATGTCCCTGCCGCCAACGACG ACGACGACGGCGACGGCGACGGCGACGGCGCCGGCGCCGGCGCCGACGCCCTCCCCGAAC GCGACGGCGGTCGCCGTGGGCGACGCGAACAGGTACGGAATGATCATCGACATCGCGTCG ACGATCACGTTCCTGGAGGCATCGCTGTACGACGAGCTGGTGAACGACCTGGAGGTGGAG ATCCGGCTGCCGCGCGGGACGGGGTCAAGCCTGGGCCTCGACCTGTGCTTCATCCTGCCC GACGGCGTGGCGTTCGACCGGGTGTACGTGCCGGCGGTGGCGCTGGCGTTCGACGGGAGG TGGCTCCGGCTGGACAAGGCGCGGCTGTTCGCGGAGGACAGGGAGAGCGGGATGATGTGC CTGATGGTGGGGAGGGCGGAGGCGGGCAGCGTCTCCATCCTCGGCAACTTCCAGCAGCAG AACATGCAGGTGCTCTACAACCTTCGCCGCGGCAGGGTCACCTTCGTCCAGTCCCCCTGC GGCGCCCTGCGATGA

Peptide Sequence

PEP ID	Os04t0448500-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:22353813:22355207:1 gene:Os04g0448500 transcript:Os04t0448500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aspartic protease 37, E. coli cation transport protein ChaC homolog description:Peptidase A1 domain containing protein. (Os04t0448500-00)
Sequence	MNAAVLLLLLALAALPASCAPPRSFRLELASVDASAADAANLTEHELLRRAIQRSRYRLA GIGMARGEAASARKAVVAETPIMPAGGEYLVKLGIGTPPYKFTAAIDTASDLIWTQCQPC TGCYHQVDPMFNPRVSSTYAALPCSSDTCDELDVHRCGHDDDESCQYTYTYSGNATTEGT LAVDKLVIGEDAFRGVAFGCSTSSTGGAPPPQASGVVGLGRGPLSLVSQLSVRRFAYCLP PPASRIPGKLVLGADADAARNATNRIAVPMRRDPRYPSYYYLNLDGLLIGDRAMSLPPTT TTTATATATAPAPAPTPSPNATAVAVGDANRYGMIIDIASTITFLEASLYDELVNDLEVE IRLPRGTGSSLGLDLCFILPDGVAFDRVYVPAVALAFDGRWLRLDKARLFAEDRESGMMC LMVGRAEAGSVSILGNFQQQNMQVLYNLRRGRVTFVQSPCGALR

Transcript Sequence

Transcript ID	Os04t0448500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:22353813:22355207:1 gene:Os04g0448500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:aspartic protease 37, E. coli cation transport protein ChaC homolog description:Peptidase A1 domain containing protein. (Os04t0448500-00)
Sequence	ATGAACGCCGCCGTGTTGCTGCTGCTCCTCGCGCTCGCCGCCCTCCCGGCGTCGTGCGCG CCGCCGAGATCCTTCCGCCTCGAGCTCGCCAGCGTCGACGCCTCGGCAGCCGACGCCGCC AACCTCACGGAGCATGAGCTCCTGCGGCGCGCCATCCAGCGCAGCCGGTACCGGTTGGCC GGCATCGGCATGGCGCGCGGCGAGGCGGCCAGCGCGCGCAAGGCCGTCGTGGCCGAGACG CCCATCATGCCGGCCGGCGGCGAGTACCTGGTGAAGCTCGGCATCGGCACGCCGCCGTAC AAGTTCACGGCGGCCATAGACACCGCCAGCGACCTCATCTGGACGCAGTGCCAGCCCTGC ACCGGCTGCTACCACCAGGTCGACCCCATGTTCAACCCCAGGGTGTCCTCCACCTACGCC GCGCTGCCGTGCAGCAGCGACACGTGCGACGAGCTGGACGTGCACCGGTGCGGCCACGAC GACGACGAGTCGTGCCAGTACACCTACACGTACAGCGGCAACGCCACGACGGAGGGCACC CTGGCCGTCGACAAGCTGGTCATCGGCGAGGACGCGTTCCGCGGCGTCGCCTTCGGCTGC AGCACCTCCAGCACCGGCGGCGCCCCGCCACCGCAGGCGTCCGGTGTGGTCGGCCTCGGC CGCGGCCCACTCTCGCTGGTGTCCCAGCTCTCTGTGCGGAGGTTCGCCTACTGCCTGCCC CCGCCGGCGTCGAGGATCCCCGGGAAGCTCGTCCTCGGCGCCGACGCCGACGCCGCCCGC AACGCCACCAACCGGATCGCCGTCCCGATGAGACGGGACCCGCGGTACCCGTCCTACTAC TACCTCAACCTCGACGGCCTGCTCATCGGCGACAGGGCGATGTCCCTGCCGCCAACGACG ACGACGACGGCGACGGCGACGGCGACGGCGCCGGCGCCGGCGCCGACGCCCTCCCCGAAC GCGACGGCGGTCGCCGTGGGCGACGCGAACAGGTACGGAATGATCATCGACATCGCGTCG ACGATCACGTTCCTGGAGGCATCGCTGTACGACGAGCTGGTGAACGACCTGGAGGTGGAG ATCCGGCTGCCGCGCGGGACGGGGTCAAGCCTGGGCCTCGACCTGTGCTTCATCCTGCCC GACGGCGTGGCGTTCGACCGGGTGTACGTGCCGGCGGTGGCGCTGGCGTTCGACGGGAGG TGGCTCCGGCTGGACAAGGCGCGGCTGTTCGCGGAGGACAGGGAGAGCGGGATGATGTGC CTGATGGTGGGGAGGGCGGAGGCGGGCAGCGTCTCCATCCTCGGCAACTTCCAGCAGCAG AACATGCAGGTGCTCTACAACCTTCGCCGCGGCAGGGTCACCTTCGTCCAGTCCCCCTGC GGCGCCCTGCGATGA