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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0446200-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:22243767:22246346:1 gene:Os04g0446200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0140O07.13 protein. (Os04t0446200-01)
Sequence

ATGGCCTCGAGCTCGCGCGGCGGCGGCGGCGGCGGCGGCGGCGTCGGGCCCGACGGGGGC
GTCGGGGACGGGCCGACGACGCTCGACGAGCTGTACAAGATCAACGTGGTGCCGGCCGAG
CTGCACTTCAAGTTCCGCAAGGAGCTCCAGGGCCTCCGCGTCGGCCTCAACTTCGAGTTC
TATAATCTTGAGGTGAATGATTTTGAGGCGAAGGTAGTTCTGAAGCCTCTGGACTATGAA
CGGAAGTGGAAGTTCCACTACAAGCCCATCAGCGGTGATATACAGCTTCTTTCCAAGAAG
ATACCAGTAACGAAGTTTCTCAATCTACAGGTTCTCTCATTGAACCATGTTATTTGTGCA
TCATTTTTGTGGTAG

Peptide Sequence

PEP ID

Os04t0446200-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:22243767:22246346:1 gene:Os04g0446200 transcript:Os04t0446200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0140O07.13 protein. (Os04t0446200-01)
Sequence

MASSSRGGGGGGGGVGPDGGVGDGPTTLDELYKINVVPAELHFKFRKELQGLRVGLNFEF
YNLEVNDFEAKVVLKPLDYERKWKFHYKPISGDIQLLSKKIPVTKFLNLQVLSLNHVICA
SFLW

Transcript Sequence

Transcript ID

Os04t0446200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:22243767:22246346:1 gene:Os04g0446200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0140O07.13 protein. (Os04t0446200-01)
Sequence

GCCACTCATTTCTAGATTACGGCCGGGTGGCGCCGCTCCTCCCCTCCTCGCTGCCGCCCA
TCGTCGTTCCGCCGCCCAAATCAAACCCAAGAGAAAGAGAAAGAGAAAGGGAACCCCCTC
TTCCTTCCTCCCTCCCGCCCCCGCCTCCCCCCATGGCCTCGAGCTCGCGCGGCGGCGGCG
GCGGCGGCGGCGGCGTCGGGCCCGACGGGGGCGTCGGGGACGGGCCGACGACGCTCGACG
AGCTGTACAAGATCAACGTGGTGCCGGCCGAGCTGCACTTCAAGTTCCGCAAGGAGCTCC
AGGGCCTCCGCGTCGGCCTCAACTTCGAGTTCTATAATCTTGAGGTGAATGATTTTGAGG
CGAAGGTAGTTCTGAAGCCTCTGGACTATGAACGGAAGTGGAAGTTCCACTACAAGCCCA
TCAGCGGTGATATACAGCTTCTTTCCAAGAAGATACCAGTAACGAAGTTTCTCAATCTAC
AGGTTCTCTCATTGAACCATGTTATTTGTGCATCATTTTTGTGGTAGCTTTATAGCAATG
ACTAGTACACATATTTGTCATGGCCCTGTCTTGACACAGTCAGTATATACTGTTCATTGG
TATCTTCCATGAAACATGTTGTTTGATGGTGCCACTAGAGAAGTTAGTTGGTATTTGCAT
TGCACATAGTAGCTATGCATTTCTATGGTTAGTCATTTTTGTGCTTCCAGTTTTTGAGCA
GTTGAGTGTATGGAATTGATGTGAGTAAAATTTTTAAACAGGATATATGAGTTCAGTTTG
TTGTTCTTCAGACCTCAGGTTTGAAGTGCTAAGAAACAAATATATTTTCAACCATGGTAG
TGGAATGTGGAAGATAAATATCTTGGCTTCAGTTAAGCAAATTTATTTTATATGGAGACC
ATGTCATGTATATGTTCCTTGATCACAATATTCTTCTGAAAATGTACTGCATGCATCAGT
TTTTATTTTAAGAAGCTAGACGAAATAATTTCTTGATTTATCTGAAGAGTAAAGCTACTG
AACAATGGAGTCGGTCCTCTTTTCGCAACTTACATTTTTTTTGTGGGTGGTAAATAAGGA
ATTTTCTCTAACATCACTGGTATTTAATAATTATCTATGATTTGCTGATGTTTAGCTGAT
GTCACATATCAATTTCTGGGTGGCTAAAATGACAGTTTTGGGGACCATGAAATATACCTT
GATTATGGCACATACCGTTTGCTTCAATTTTCTGTCTCAGCGGAAGATTTGGTCCTTCAA
AACATATAACAAGTGATTCCTGGGACTTTCTGTTGCTTCCTTCTCTTAATGTGTACACCA
GGAACAGAGTATAGACCATTTCTCCTAGCCAGAAAGTATAATGCACATCTAACTGACATG
CAAAGTTAGTTGAATTAGAAAGGATCAGATTGGTTGGACATACCACACATGGTCAACATG
GTGAAACACAGGAACCAGTAGTGATTAAAAAAAAGTGCCCAGCTTGAATCTTCATTTGTT
CAACAAGTTCCTTTTCTAGTACTGATAGTACATGGAATTTCTAATAACAATGGTTACAGG
TCGGCATTGGTCACAATTTCCATCTCAATGCCACTGGATGGAAGTGGAAGCTCTCTACGT
GTTTGGGGGGAGATGGTGTCTCTCAGATAAGAAACAAATCGACACTCAGCATGTTCCCAG
GGTTTGATTTGAGGGTCGGTTGGAGAGCTGAATATGTGCTTCCTGAGATTCATGGGGCTG
TTGGAACAGGAGAACCTGCCTTCAGTATGAACTACGGGCGATTGCAAGCATCAATAGATC
GAGTTGAGGCTATCGTAACACAGTCAGATCGGTATTGACCCCTTACAAGGTATATACCAG
GAGGGTGAAGATGATACATCTCAAATCCAATGGAGTTCTTCTCACTTGAGTCACTTCTGT
ATTTTGAGGTTTTGTATCTGATGTACAGTAATTAGCGAAGTGTTATTCTAGGAACAGAGG
TTGTCCAAACCCTTGCACGGCACTTGTTTTAGCAAACATGATGAATAATGTTCCTGATGA
TTGTGTTTGGC