Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0446100-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:22239380:22242286:-1 gene:Os04g0446100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0140O07.12 protein. (Os04t0446100-00)
Sequence	ATGACGACCCCCGCCGCCGCCGCCGCCGCCGCCGCCTCCTCCTCCTCCGCCTCCTCGCCC CCGAACCCTCCACCGCCGTCGCTCTCTCTGATGCCTTCCCGCCTCCACGCCCTCCTCTGC ATCTACCTGCCCCATCCCCGCCCCCTCGCCCGCCTCCTCCACTACTCCGCCGCCGGCCCG CCGTCGCAGCAGCAGCAGCTCCCGCCTTCTTCGTCGCCGCCGTCGCCGTCGCACGCGTCG GCCGAGCTCTGGATCGCCAAGGCGCTCGCGTCCGCGGCATTGCTCCGCCCGCGGCACCTC CCGGGGTTCCGCCGCATCGACCCTTCCCCGCTCGCCGCCGCCGCCGCGCTCCGTCTCGCG CCGTGCGCCTCCTCGGCCCTCGCCGTCTTCACCGCGCTGCATTGCTCGCCGCTCTCCATC ACGCCGTCCGCGCACTCCTGCCAGCAGATCATCGTGGTGCTGTGCAGGTCCGGCCGCCAG GCCGACGCCCTCCAGCTGTTTGACCAAATGACGACCCACTACGGGTACTCTCCCGACGCC CGTTTTCTCTCGTTCCTGGTCAGTTCCTGCACATGTGCAAACCTTCTGGATGCGTCCGCG ACATTGCTATCGAAGGCATCGGAGTTTGGTTGCCGCGTAGAAGCATATGCGTATAACAAG CTCATGAGCTCGTTGATTGGCCGTGGACGGGTGCATGATGTTGTGGCGTTGTTTGAACGG TGGATTCAGGACAGGGTATATTCTCCAGATGTTTGGAGCTTTAATGTTGTCATCAAGGGG GTTTGTCGGGTGGGGCAAGTCCAAAAGGCGCTCGAGCTGGTCGAAAGGATGAATGAATTT GGGTGTTCACCAGATACTGTCACACATAACATCCTTGTGGATGGTCTATGCAGGACTAAT GAGGTGAGTAGAGGTCATGAGGTGTTGAGGAGGCTCCAGAGGGACGGTGTTTGCATGCCC AATGTTGTGACATTCACCTCGGTGATCTCAGGTTACTGTAAGGCTGGGAAGTTGGAGGAT GCAATGGCTGTATACAATGACATGGTTGCATCTGGGATAATGCCCAACACGGTTACATAC AATGTGCTTATAAATGGATATGGCAAAGTTGGCGACTTGGGTTCTGCGGTGGAAGTGTAT CAGCAAATGACGCGACTTCGGTGCCCTCCTGATGTTGTGACATTTAGTTCTTTGATTGAT GGTTATTGTCGGTGTGGGCAACTTGATGATGCATTGAGGATTTGGAGTGATATGGCCCAG CATCGGATTCAACCAAATGTGTACACCTTTTCTATCATAATACACTCACTTTGTAAGCAG AACAGATCAGATGAAGCAATTGGTCTTTTGAATGAACTAAACTTGAGACCTGACATTGCA CCACAAGCATTCATATATAACCCAGTGATAGATGTACTGTGCAAGTGTGGCAAGGTGGAT GAAGCAAACTTGATTCGAAAGGGCATGGAAGAAAAAGGATGTCGCCCTGACAAGTATACA TATACTATTCTAATAATTGGTTACTGCATGAAGAGTAGGATTTCAGAGGCTATCATGTTT TTCCATGAAATGGTGGAGGCTGGTTGTTCCCCTGACAGTATTACAGTTAATTGTTTTATT AGTTGCCTATTAAAGGCTGGGATGCCAAATGAGGTGGATCATGTAATGCGTCTTGCATCA GGGGGTGCTTCATCTATTCAGGAAGTCCCTTCTCCTGTGAGGCAAAGACTAGATATTTCA GTAGCTTTGTAG

Peptide Sequence

PEP ID	Os04t0446100-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:22239380:22242286:-1 gene:Os04g0446100 transcript:Os04t0446100-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0140O07.12 protein. (Os04t0446100-00)
Sequence	MTTPAAAAAAAASSSSASSPPNPPPPSLSLMPSRLHALLCIYLPHPRPLARLLHYSAAGP PSQQQQLPPSSSPPSPSHASAELWIAKALASAALLRPRHLPGFRRIDPSPLAAAAALRLA PCASSALAVFTALHCSPLSITPSAHSCQQIIVVLCRSGRQADALQLFDQMTTHYGYSPDA RFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDVVALFER WIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTN EVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTY NVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQ HRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVD EANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFI SCLLKAGMPNEVDHVMRLASGGASSIQEVPSPVRQRLDISVAL

Transcript Sequence

Transcript ID	Os04t0446100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:22239380:22242286:-1 gene:Os04g0446100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0140O07.12 protein. (Os04t0446100-00)
Sequence	AAGGCCAAAACGGCAAAACCCTGCCCCCTCCATTCTCTGGTCCATATGGCCTCCTCTCTC TTTGTCACATCGCGGTGAGTTAATGACGACCCCCGCCGCCGCCGCCGCCGCCGCCGCCTC CTCCTCCTCCGCCTCCTCGCCCCCGAACCCTCCACCGCCGTCGCTCTCTCTGATGCCTTC CCGCCTCCACGCCCTCCTCTGCATCTACCTGCCCCATCCCCGCCCCCTCGCCCGCCTCCT CCACTACTCCGCCGCCGGCCCGCCGTCGCAGCAGCAGCAGCTCCCGCCTTCTTCGTCGCC GCCGTCGCCGTCGCACGCGTCGGCCGAGCTCTGGATCGCCAAGGCGCTCGCGTCCGCGGC ATTGCTCCGCCCGCGGCACCTCCCGGGGTTCCGCCGCATCGACCCTTCCCCGCTCGCCGC CGCCGCCGCGCTCCGTCTCGCGCCGTGCGCCTCCTCGGCCCTCGCCGTCTTCACCGCGCT GCATTGCTCGCCGCTCTCCATCACGCCGTCCGCGCACTCCTGCCAGCAGATCATCGTGGT GCTGTGCAGGTCCGGCCGCCAGGCCGACGCCCTCCAGCTGTTTGACCAAATGACGACCCA CTACGGGTACTCTCCCGACGCCCGTTTTCTCTCGTTCCTGGTCAGTTCCTGCACATGTGC AAACCTTCTGGATGCGTCCGCGACATTGCTATCGAAGGCATCGGAGTTTGGTTGCCGCGT AGAAGCATATGCGTATAACAAGCTCATGAGCTCGTTGATTGGCCGTGGACGGGTGCATGA TGTTGTGGCGTTGTTTGAACGGTGGATTCAGGACAGGGTATATTCTCCAGATGTTTGGAG CTTTAATGTTGTCATCAAGGGGGTTTGTCGGGTGGGGCAAGTCCAAAAGGCGCTCGAGCT GGTCGAAAGGATGAATGAATTTGGGTGTTCACCAGATACTGTCACACATAACATCCTTGT GGATGGTCTATGCAGGACTAATGAGGTGAGTAGAGGTCATGAGGTGTTGAGGAGGCTCCA GAGGGACGGTGTTTGCATGCCCAATGTTGTGACATTCACCTCGGTGATCTCAGGTTACTG TAAGGCTGGGAAGTTGGAGGATGCAATGGCTGTATACAATGACATGGTTGCATCTGGGAT AATGCCCAACACGGTTACATACAATGTGCTTATAAATGGATATGGCAAAGTTGGCGACTT GGGTTCTGCGGTGGAAGTGTATCAGCAAATGACGCGACTTCGGTGCCCTCCTGATGTTGT GACATTTAGTTCTTTGATTGATGGTTATTGTCGGTGTGGGCAACTTGATGATGCATTGAG GATTTGGAGTGATATGGCCCAGCATCGGATTCAACCAAATGTGTACACCTTTTCTATCAT AATACACTCACTTTGTAAGCAGAACAGATCAGATGAAGCAATTGGTCTTTTGAATGAACT AAACTTGAGACCTGACATTGCACCACAAGCATTCATATATAACCCAGTGATAGATGTACT GTGCAAGTGTGGCAAGGTGGATGAAGCAAACTTGATTCGAAAGGGCATGGAAGAAAAAGG ATGTCGCCCTGACAAGTATACATATACTATTCTAATAATTGGTTACTGCATGAAGAGTAG GATTTCAGAGGCTATCATGTTTTTCCATGAAATGGTGGAGGCTGGTTGTTCCCCTGACAG TATTACAGTTAATTGTTTTATTAGTTGCCTATTAAAGGCTGGGATGCCAAATGAGGTGGA TCATGTAATGCGTCTTGCATCAGGGGGTGCTTCATCTATTCAGGAAGTCCCTTCTCCTGT GAGGCAAAGACTAGATATTTCAGTAGCTTTGTAGTTGAATGGTACAGCAGAGAATGGAAG GAAAAGCACACTGACTGTTTCTGGTATGCACTGCAGAACATCTGGAACTTGCAAAGCTTA TAAGAGGCTGTGGTGACTGGTGAGTTGTTCTTGATATTCAGATAAGAGAACCTCAAATGT AAACATATTGCACCTGGACCAGAACTACCAAGAAACTAATCGAAAACAACTTCACACTGA TCAATAAAGTAAAAGGCAAGCCATTTGGTCTCCTAGTATTTAGTGAAGCAACAGATATAT GGTTGCCAGAGCTGCAAATTTCATTGGAGTTGCTTATGTGATAAAATGATGCTCTATCAA TTCTTGGCATGTCCCTAAACAACTCATGTATAACTGGTTCGCCTGATCGCTTTCCTGGGA CTTCCAGTCACTTTGGTCCATATGCGTCAGCAACATGCTTTTTTGGACTTGTTAACTGAA ATGAGATTGAGTAGCAGTTGAAGACTTGATTCTTGAAGAATGGCATGAAGTAATTTTCCC TCTAGCAGAGGTACTTCACCTGTTACCAGTTTTTCTTGTGCTATTCAGTGTGGTATAGAT TTTTTTTAGGAGGTAGTTGATCATTTTGATCATCTATACACATGGTTGTCCATATTTCCA ATAATGCTTACACAA