Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0445400-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:22206784:22209481:1 gene:Os04g0445400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0140O07.6 protein. (Os04t0445400-01)
Sequence

ATGGCGGCGGAGGCGGGGATGCGCGTGAACGTGGCGAGTCTGCTCGCCCTCGGGGACGAC
ACCGTGGAGTTGCTCGGCGAGAGGAAGGACGGCGAGGCCCTCGCGCAGGCCTGCGCCGGG
GCGCGGATGCTGCGTTCCGCCTGCCGCTCGGAGTCCGACGACCTCGAGGTGCAAATGAAA
GAGTATCAGGAAAAAATAAAGTCCTGCAAAGAAAAGATAGAAAAGACAAAATCTGAAACA
ATTGCCGATGATGAACTGAATGCTCTGCAAAAAGAGATGGAGGAGAAACTTCAAGATGAG
CAACGCCTTCGCCAGGATTTAAGAGCAGTACGTGATGAGCTTGATAACCTAGATAGCCAA
AGAGATTCTATAGAACAAAGGAAGGAAGCTCTAAGGAAGATGGAAAAGGAAATGATGAAA
GCACAAAATATGCTTTCCATGTGTGTGTCAGTGACCAAAATCATGCCAAATTTTGAAGAC
AAGGACAAGATCTCTGGTTATATTGTTGATAAGAACATGAAGAAACTAGAGAGGTTCGAG
TTTGACAAGACGACGCCCCCTGTTGATATCTGCAACAACCTTTGGAAGATGGTTTAG

Peptide Sequence

PEP ID

Os04t0445400-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:22206784:22209481:1 gene:Os04g0445400 transcript:Os04t0445400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0140O07.6 protein. (Os04t0445400-01)
Sequence

MAAEAGMRVNVASLLALGDDTVELLGERKDGEALAQACAGARMLRSACRSESDDLEVQMK
EYQEKIKSCKEKIEKTKSETIADDELNALQKEMEEKLQDEQRLRQDLRAVRDELDNLDSQ
RDSIEQRKEALRKMEKEMMKAQNMLSMCVSVTKIMPNFEDKDKISGYIVDKNMKKLERFE
FDKTTPPVDICNNLWKMV

Transcript Sequence

Transcript ID

Os04t0445400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:22206784:22209481:1 gene:Os04g0445400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0140O07.6 protein. (Os04t0445400-01)
Sequence

AAAAGAAAAAGAAAAGGAAGAAGAAAAACTCTCGTCGGCGGCGACCTAAACGCCGGCGAG
CTGAAGGGGAAGGGAGGGAAGCCGCCGGCGACCACCCACCGCACCTACCACCACCTCGGC
CTCATACACCCTCCTCTCTGTGCGCGTCTTTCTCTCCGCCGGACTGCGGCGCGGGCGGAA
GCGGGGTGGTTTTAGGGTTTTGGCCGGCGACCAGATGGCGGCGGAGGCGGGGATGCGCGT
GAACGTGGCGAGTCTGCTCGCCCTCGGGGACGACACCGTGGAGTTGCTCGGCGAGAGGAA
GGACGGCGAGGCCCTCGCGCAGGCCTGCGCCGGGGCGCGGATGCTGCGTTCCGCCTGCCG
CTCGGAGTCCGACGACCTCGAGGTGCAAATGAAAGAGTATCAGGAAAAAATAAAGTCCTG
CAAAGAAAAGATAGAAAAGACAAAATCTGAAACAATTGCCGATGATGAACTGAATGCTCT
GCAAAAAGAGATGGAGGAGAAACTTCAAGATGAGCAACGCCTTCGCCAGGATTTAAGAGC
AGTACGTGATGAGCTTGATAACCTAGATAGCCAAAGAGATTCTATAGAACAAAGGAAGGA
AGCTCTAAGGAAGATGGAAAAGGAAATGATGAAAGCACAAAATATGCTTTCCATGTGTGT
GTCAGTGACCAAAATCATGCCAAATTTTGAAGACAAGGACAAGATCTCTGGTTATATTGT
TGATAAGAACATGAAGAAACTAGAGAGGTTCGAGTTTGACAAGACGACGCCCCCTGTTGA
TATCTGCAACAACCTTTGGAAGATGGTTTAGATGTTGCGTGGAGATAACGGTCGTGGACG
ATGGACCTCCCATCGAACATCCCTTTTTTTTTGTTATCACCGTTGAATGCTGCCAAAGGA
CCAAGATGCGTCCAGTTCGCATTTCATGCAGAGATCTACAGAAGTGCTATCTGTTTGTAG
ATTTGCTAAGATCAAGATCTCTTTAGCTAGTCCTTGGCTCGTTGCCATGTTCCTTTTAGT
ATGTGTAAGTACTAAGTTGTATAACATTTCACATGCTATTGTTATTCCGGAAGCTGCTCT
CACTTGCAAAGCTGCAAGTTTGCAGCCCAATGCCATTTGGTTTCTTGG