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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0445300-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:22205218:22205909:1 gene:Os04g0445300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os04t0445300-01)
Sequence

ATGGCAGCGAGGCTTGTCTTCTCCCTCCTCCTCACCGTGGCGTGCTCCCACGCGGCGCTC
GCCGCCGCCGCCTCCTCCTCCGCCGTGGAGGACACCTGCGCGAAGGCGACGGCGAGCGGC
AGCCGCAAGGACCTTGCCCCGTTCTGCGTGTCGACCCTGCAGGCCGCGCCGGGGAGCGCC
GGCGCCGACGCGCGCGGCCTCGCCGTGATTGCCACCAACCTGACGCTGGCCAACTACACG
GCCGCGTACGCCACCATCAAGGCGCTGCAGCGGCGCGGCGGCTGGTCGGAGCGCGAGCGG
GCCGCGCTCGCCACGTGCCGGCAGCTGTACATCGAGGCGCTCAACGTCGTGCACAGCGCC
ATCCACGCGCTGAACACCGGGCAGACGCAGGCGTACGTCGCGGACATGGGCGTCGTCCGG
CGCGCCGCCACCGGCTGCGAGGACGCGTTCGGCTTCGGCGGCGGCGGCGGCGGCGGCGGC
GTAGGCAACCAGCTGGCCACGGAGTCGCCGCTGCACAAGGTGGACGACGACGCCATCAAC
CTGACCACCGTCGCCACGCTGATCGTCCTCATCCTGTAA

Peptide Sequence

PEP ID

Os04t0445300-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:22205218:22205909:1 gene:Os04g0445300 transcript:Os04t0445300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os04t0445300-01)
Sequence

MAARLVFSLLLTVACSHAALAAAASSSAVEDTCAKATASGSRKDLAPFCVSTLQAAPGSA
GADARGLAVIATNLTLANYTAAYATIKALQRRGGWSERERAALATCRQLYIEALNVVHSA
IHALNTGQTQAYVADMGVVRRAATGCEDAFGFGGGGGGGGVGNQLATESPLHKVDDDAIN
LTTVATLIVLIL

Transcript Sequence

Transcript ID

Os04t0445300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:22205218:22205909:1 gene:Os04g0445300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectinesterase inhibitor domain containing protein. (Os04t0445300-01)
Sequence

AACGCAAGAAAAAAAAAAGAGCTCAAGCAATGGCAGCGAGGCTTGTCTTCTCCCTCCTCC
TCACCGTGGCGTGCTCCCACGCGGCGCTCGCCGCCGCCGCCTCCTCCTCCGCCGTGGAGG
ACACCTGCGCGAAGGCGACGGCGAGCGGCAGCCGCAAGGACCTTGCCCCGTTCTGCGTGT
CGACCCTGCAGGCCGCGCCGGGGAGCGCCGGCGCCGACGCGCGCGGCCTCGCCGTGATTG
CCACCAACCTGACGCTGGCCAACTACACGGCCGCGTACGCCACCATCAAGGCGCTGCAGC
GGCGCGGCGGCTGGTCGGAGCGCGAGCGGGCCGCGCTCGCCACGTGCCGGCAGCTGTACA
TCGAGGCGCTCAACGTCGTGCACAGCGCCATCCACGCGCTGAACACCGGGCAGACGCAGG
CGTACGTCGCGGACATGGGCGTCGTCCGGCGCGCCGCCACCGGCTGCGAGGACGCGTTCG
GCTTCGGCGGCGGCGGCGGCGGCGGCGGCGTAGGCAACCAGCTGGCCACGGAGTCGCCGC
TGCACAAGGTGGACGACGACGCCATCAACCTGACCACCGTCGCCACGCTGATCGTCCTCA
TCCTGTAACCGAATTCGCTGCAAATTCCTTGGATCTTGGTTGAGTGTGTCATTGTTCAGA
CTCAAGAAACGAATAAAAGTTCATCAAAATTC