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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0445200-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:22203158:22203891:-1 gene:Os04g0445200 gene_biotype:protein_coding transcript_biotype:protein_coding description:RmlC-like jelly roll fold domain containing protein. (Os04t0445200-01)
Sequence

ATGGCGAGCCCAACAACAATGGTGGGAGTGGCAACCTCGGCGCATCTCCACACCACCACC
ACCGGCCGCCTCAGCTGCGCCTGTGCACCACCGACGAGGGGAACAAGGCGGCGGCGGCTC
GCGGTGGCGGTGCGGGTGCGGGTGCGGGTGCGGGCGTCGGCGTCGGAGGCGATGGCGACG
GAGAAGCTCGGCGTCCGTGTGGAGCGCAACCCGCCCGAGTCCCGCCTCTCCGAGCTCGGC
GTCCGCGAGTGGCCCAAGTGGGGGTGCGAGAAGAGCAAGTTCCCGTGGACGTACTCGGCC
AAGGAGACGTGCTACCTGCTGCAGGGGAAGGTGAAGGTGTTCCCGGACGGCGCCGGCGAG
GATTTCGTGGAGATCGCGGCGGGGGACCTGGTGGTGTTCCCCAAGGGGATGAGCTGCACC
TGGGACGTCGCCGAGGCCGTCGACAAGCACTACAAGTTCGAGTAG

Peptide Sequence

PEP ID

Os04t0445200-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:22203158:22203891:-1 gene:Os04g0445200 transcript:Os04t0445200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RmlC-like jelly roll fold domain containing protein. (Os04t0445200-01)
Sequence

MASPTTMVGVATSAHLHTTTTGRLSCACAPPTRGTRRRRLAVAVRVRVRVRASASEAMAT
EKLGVRVERNPPESRLSELGVREWPKWGCEKSKFPWTYSAKETCYLLQGKVKVFPDGAGE
DFVEIAAGDLVVFPKGMSCTWDVAEAVDKHYKFE

Transcript Sequence

Transcript ID

Os04t0445200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:22203158:22203891:-1 gene:Os04g0445200 gene_biotype:protein_coding transcript_biotype:protein_coding description:RmlC-like jelly roll fold domain containing protein. (Os04t0445200-01)
Sequence

ACGAGTCCACGACTACTTGAGGATGGCGAGCCCAACAACAATGGTGGGAGTGGCAACCTC
GGCGCATCTCCACACCACCACCACCGGCCGCCTCAGCTGCGCCTGTGCACCACCGACGAG
GGGAACAAGGCGGCGGCGGCTCGCGGTGGCGGTGCGGGTGCGGGTGCGGGTGCGGGCGTC
GGCGTCGGAGGCGATGGCGACGGAGAAGCTCGGCGTCCGTGTGGAGCGCAACCCGCCCGA
GTCCCGCCTCTCCGAGCTCGGCGTCCGCGAGTGGCCCAAGTGGGGGTGCGAGAAGAGCAA
GTTCCCGTGGACGTACTCGGCCAAGGAGACGTGCTACCTGCTGCAGGGGAAGGTGAAGGT
GTTCCCGGACGGCGCCGGCGAGGATTTCGTGGAGATCGCGGCGGGGGACCTGGTGGTGTT
CCCCAAGGGGATGAGCTGCACCTGGGACGTCGCCGAGGCCGTCGACAAGCACTACAAGTT
CGAGTAGATTTGGGGATTTGGCACGCCAATCGATTTCAGCCATATGACATGGCGATGGTT
TGTGCTTCTGCTATCTTCTACTAGTAACTTAGCTCGTGCTCTTATGCGTTATATGCTCCA
GTTGTTGTGGATCATCTCCTGCAAATGAAATAAAACTTGATTAGTGGATT