Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0443900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:22118247:22122536:-1 gene:Os04g0443900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RuBisCO large subunit-binding protein subunit beta, chloroplastic. (Os04t0443900-01)
Sequence	ATGTCGAGGATGGCGGCGCCGCCGCCGCCGCTCTCCGGCACCGGCAAGCCGCCCACACTC CCCTTCTCCCTCAAGAAGCCGCCGCCCATGCCGGTGTACAAGGACCTGCACTTCAACCGC GACCTCTCCGCCACCAAGAAGCTGCAGGCCGGCGTGGACCTGGTGGCACGGCTGGTCGGG GTGACGCTGGGGCCCAAGGGGAGGAACGTGGTGCTGAGCAACAAGTACGGCCCTCCCAAG ATCGTCAACGATGGGGAGACGGTCCTCAAGGAGATTGAATTGGAGGACCCGTTGGAAAAT CTTGGAGTGAAGCTGGTCAGACAGGCTGGTGCCAGGACGAACGATGTTGCTGGTGATGGT TGTACCACTTCCATAATCCTTGCTCAAGGCCTCATCGCTGAAGGAATGAAGGTGCTTGCA GCTGGAATTAATCCTGTCCAGATTGCGCGGGGCATTGAGAAGACTGCTTCTGCTTTGGTG TCTGAACTCAGATTGATGTCCCGGGAGATAGAAGACCATGAAATTGCACATGTGGCTGCA GTTAGTGCAGGAGATGATTATGCTGTTGGAAATATGATTTCTGATGCTTTTAAAAGAGTA GGCAGGAAAGGCATGGTGAGGATTGAAAATGGAAGGGGCACGGAAAATGGTCTAGAGATT GTGGAAGGAATGCAATTTGAACGTGGTTACCTCTCACCGTACTTTGTGACTGATTGTACA AATATGTCCGCGGAGTTTACTGACTGTAAGATATTGTTGGTTGACAAGAAAATTACTGAT GCAAGTGAGATTATAAGGATATTGGATAGTGCTGTCAAAGAAGATTATCCATTGTTGATA GTTGCCGAGGATGTGGAAGAAAAAGCAATGGCTGATTTGATAAAAAACAAGCTAAAAGGG ACAATTAAAGTGGCTGCAATCAAGGCCCCTTCCTTTGGGGAACAAATGACTCAATGTTTG GATGACATTGCCATCATGACAGGAGGTACACTAGTGCGTGAAGACATGGGATATACACTA GAAAAGGCAGGGAAAGAGGTTCTAGGTTCTGCTTCTAAGGTTGTAGTCGGGAAAGACTCA ACACTAATTGTTACCGATGGAAGCACCCAACATGTGATCGAGAAAAGGGTTGCTCAGATA AAGGGCCAAATTGAGAACTCAAGTGAGAGGTACCAGAAGAAGATATTGGGTGAGAGAATA GCAAGGTTATGTGGTGGAATTGCAATCATTCAGGTCGGTGCTCAAACAATCATTGAGATG AAAGACAAGAAGCTCAGAATTGAAGATGCCCTTAATGCAACAAAGGCAGCTATTGAGGAA GGAGTTGTGATAGGTGGTGGATGTAGCCTATTAAGATTATCCATGAAGATTGATAGAATT AAGGAATCATTGGATAATATGGAGCAGAAGATTGGCGCTGACATCTTCAAACAGGCTTTG AGTTACCCTACTGCATTGATTGCAAACAATGCTGGGGTGAACGGCAGCTTCGTCATAGAA AAGGTGTTATTAAATGAGGACAGTAGATATGGCTACAATGCTGCCAAGAACCGCTATGAG GACTTAATGGCCGCTGGAATATTAGATCCATCAAAGGTTGTGAGATGTTGCATAGAACAT GCTGCTGTGGTCGCCAAGTCTTTTCTCACATCTGACGTGGTGATTGTTGAGGCGAAAGAA GGCAAACCAGTTCGCATAAGGCCCCCGATGCCTCCTAAAAGTTTGATACCCCCAATGCCT GCTTCTGCTTCAGGAATTCGAGTGTAG

Peptide Sequence

PEP ID	Os04t0443900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:22118247:22122536:-1 gene:Os04g0443900 transcript:Os04t0443900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RuBisCO large subunit-binding protein subunit beta, chloroplastic. (Os04t0443900-01)
Sequence	MSRMAAPPPPLSGTGKPPTLPFSLKKPPPMPVYKDLHFNRDLSATKKLQAGVDLVARLVG VTLGPKGRNVVLSNKYGPPKIVNDGETVLKEIELEDPLENLGVKLVRQAGARTNDVAGDG CTTSIILAQGLIAEGMKVLAAGINPVQIARGIEKTASALVSELRLMSREIEDHEIAHVAA VSAGDDYAVGNMISDAFKRVGRKGMVRIENGRGTENGLEIVEGMQFERGYLSPYFVTDCT NMSAEFTDCKILLVDKKITDASEIIRILDSAVKEDYPLLIVAEDVEEKAMADLIKNKLKG TIKVAAIKAPSFGEQMTQCLDDIAIMTGGTLVREDMGYTLEKAGKEVLGSASKVVVGKDS TLIVTDGSTQHVIEKRVAQIKGQIENSSERYQKKILGERIARLCGGIAIIQVGAQTIIEM KDKKLRIEDALNATKAAIEEGVVIGGGCSLLRLSMKIDRIKESLDNMEQKIGADIFKQAL SYPTALIANNAGVNGSFVIEKVLLNEDSRYGYNAAKNRYEDLMAAGILDPSKVVRCCIEH AAVVAKSFLTSDVVIVEAKEGKPVRIRPPMPPKSLIPPMPASASGIRV

Transcript Sequence

Transcript ID	Os04t0443900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:22118247:22122536:-1 gene:Os04g0443900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RuBisCO large subunit-binding protein subunit beta, chloroplastic. (Os04t0443900-01)
Sequence	GCTTCGCTTCCAGCAGCAATAGCAGTAGCCAGCCTTATCCTCTTCTCGCCTCTGCTGCTC GCGGGGAGGGGTCGGGGTAACCATGTCGAGGATGGCGGCGCCGCCGCCGCCGCTCTCCGG CACCGGCAAGCCGCCCACACTCCCCTTCTCCCTCAAGAAGCCGCCGCCCATGCCGGTGTA CAAGGACCTGCACTTCAACCGCGACCTCTCCGCCACCAAGAAGCTGCAGGCCGGCGTGGA CCTGGTGGCACGGCTGGTCGGGGTGACGCTGGGGCCCAAGGGGAGGAACGTGGTGCTGAG CAACAAGTACGGCCCTCCCAAGATCGTCAACGATGGGGAGACGGTCCTCAAGGAGATTGA ATTGGAGGACCCGTTGGAAAATCTTGGAGTGAAGCTGGTCAGACAGGCTGGTGCCAGGAC GAACGATGTTGCTGGTGATGGTTGTACCACTTCCATAATCCTTGCTCAAGGCCTCATCGC TGAAGGAATGAAGGTGCTTGCAGCTGGAATTAATCCTGTCCAGATTGCGCGGGGCATTGA GAAGACTGCTTCTGCTTTGGTGTCTGAACTCAGATTGATGTCCCGGGAGATAGAAGACCA TGAAATTGCACATGTGGCTGCAGTTAGTGCAGGAGATGATTATGCTGTTGGAAATATGAT TTCTGATGCTTTTAAAAGAGTAGGCAGGAAAGGCATGGTGAGGATTGAAAATGGAAGGGG CACGGAAAATGGTCTAGAGATTGTGGAAGGAATGCAATTTGAACGTGGTTACCTCTCACC GTACTTTGTGACTGATTGTACAAATATGTCCGCGGAGTTTACTGACTGTAAGATATTGTT GGTTGACAAGAAAATTACTGATGCAAGTGAGATTATAAGGATATTGGATAGTGCTGTCAA AGAAGATTATCCATTGTTGATAGTTGCCGAGGATGTGGAAGAAAAAGCAATGGCTGATTT GATAAAAAACAAGCTAAAAGGGACAATTAAAGTGGCTGCAATCAAGGCCCCTTCCTTTGG GGAACAAATGACTCAATGTTTGGATGACATTGCCATCATGACAGGAGGTACACTAGTGCG TGAAGACATGGGATATACACTAGAAAAGGCAGGGAAAGAGGTTCTAGGTTCTGCTTCTAA GGTTGTAGTCGGGAAAGACTCAACACTAATTGTTACCGATGGAAGCACCCAACATGTGAT CGAGAAAAGGGTTGCTCAGATAAAGGGCCAAATTGAGAACTCAAGTGAGAGGTACCAGAA GAAGATATTGGGTGAGAGAATAGCAAGGTTATGTGGTGGAATTGCAATCATTCAGGTCGG TGCTCAAACAATCATTGAGATGAAAGACAAGAAGCTCAGAATTGAAGATGCCCTTAATGC AACAAAGGCAGCTATTGAGGAAGGAGTTGTGATAGGTGGTGGATGTAGCCTATTAAGATT ATCCATGAAGATTGATAGAATTAAGGAATCATTGGATAATATGGAGCAGAAGATTGGCGC TGACATCTTCAAACAGGCTTTGAGTTACCCTACTGCATTGATTGCAAACAATGCTGGGGT GAACGGCAGCTTCGTCATAGAAAAGGTGTTATTAAATGAGGACAGTAGATATGGCTACAA TGCTGCCAAGAACCGCTATGAGGACTTAATGGCCGCTGGAATATTAGATCCATCAAAGGT TGTGAGATGTTGCATAGAACATGCTGCTGTGGTCGCCAAGTCTTTTCTCACATCTGACGT GGTGATTGTTGAGGCGAAAGAAGGCAAACCAGTTCGCATAAGGCCCCCGATGCCTCCTAA AAGTTTGATACCCCCAATGCCTGCTTCTGCTTCAGGAATTCGAGTGTAGGATACATCCCT TCCCCAGCACTGATACTCAACACAAAAGAAAGAAAATTTGGGACATGATTCTTTTGCAAA TATACCCAGATATTAACAAAGTGCAGAAATTCCTGACGAATAAATTTACCTCAAACATTG CTCTATAAGTTTTCTCGAGGAAGCTGTCACAAAAACATGGCTTTCTTGGTATGGGCAGCG TGTTCATCGACGAAAGCAGCAATAAGAGGGGTGCTGTAGAATAGAAAATACTGGAAATTT CAACTGATATTCTTGTTTCCCACACTGTTCTTTTTTTTGTTTTGTTTTTTTTTGCCTCTA TTAATAGCCTAAGCCAGTTTTAAATGGCTTATCAATATGTATATGTAAGTTGTATGTCCA GATTGTTACCTTGTAAATATGACAAGTTGTATCAAAATGTAATTTTTTTACTCGTCAGGC TTGTGTTGATATTTATTCTACATTTGTAACCATGCCTATTATTGAACCAAAGAGGACG