Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0443500-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:22087681:22093176:1 gene:Os04g0443500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein phosphatase methylesterase 1 (EC 3.1.1.-) (PME-1). Splice isoform 3. (Os04t0443500-01)
Sequence	ATGGAGCCCGCGCCGCTCGCCTCGCTGCAGGAGGAGGGTGAGGGGGAGCCCGGCGAGTCG CCGTCCTCCGCCGCCGCCGCCGTGCCGCCCCGCCCCGCCACGCACCACTCGCTCCACAAG TACGCGCCGCTGGACTGGTCGGCCTACTTCGACGAGGAGCGCCGCGTCGCCATCCCCGAC ACCGAAGACGTTTTCAATGTGTACATGGCCAGATCGGAGGGGCCTGTCGTGTTCTGCCTG CATGGTGGCGGCTACTCCGGGCTTTCGTTTGCTCTAGCAGCAAGTCGTATGAAGGAAAAG GCTCGTGTTGTTTCTATGGATCTGCGAGGGCATGGAAAATCAACCACAAGTGATGATTCA GATTTGTCCATTGAAACTCTCAGCAGCGATGTCATAGCTGTTTTACGCACATTGTATGGA GATTCTCCACCAGCCATTATACTTGTTGGGCATAGCATGGGCGGTTCTGTGGCTATACAT GTGGCCGCAAAGAAAGTTATTCGCAATCTTCACGGTCTTGTTGTTATTGATGTAGTTGAG GGAACAGCAATGGCTTCATTGATTCATATGCAGAAGATCTTAGCAAATCGAGCGCAACAT TTCCCTAGCATTGAAAAAGCTATTGAATGGAGTGTCAAAGGTGGGCCACTCAGGAACATT GATTCTGCTCGTGTTTCGATTCCATCTACCTTGAAATATGATGAATCAAGGGAATGCTAT ACATATCGAACTCCTCTCGAGGAAACAGAAAAATACTGGAAAGGATGGTATGAAGGTCTT TCTGAAAAGTTCTTGTCTTGTCCAGTGCAAAAGGTCCTATTATTAGCTGGAACTGATAGG TTGGACAGAGCTTTAACAATTGGTCAAATGCAAGGAAAGTTTCAAATGGTGGTGGTTCGA CACACTGGACATGCCATACAGGAAGATGTGCCTGAAGAATTTGCATCGCACATACTAAAT TTCATAGCTCGCAACAAAATAGGTCCTAATGGTGTTGAGATTCCTGGACTGATTAAAAAA TGGCAGCATTAG

Peptide Sequence

PEP ID	Os04t0443500-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:22087681:22093176:1 gene:Os04g0443500 transcript:Os04t0443500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein phosphatase methylesterase 1 (EC 3.1.1.-) (PME-1). Splice isoform 3. (Os04t0443500-01)
Sequence	MEPAPLASLQEEGEGEPGESPSSAAAAVPPRPATHHSLHKYAPLDWSAYFDEERRVAIPD TEDVFNVYMARSEGPVVFCLHGGGYSGLSFALAASRMKEKARVVSMDLRGHGKSTTSDDS DLSIETLSSDVIAVLRTLYGDSPPAIILVGHSMGGSVAIHVAAKKVIRNLHGLVVIDVVE GTAMASLIHMQKILANRAQHFPSIEKAIEWSVKGGPLRNIDSARVSIPSTLKYDESRECY TYRTPLEETEKYWKGWYEGLSEKFLSCPVQKVLLLAGTDRLDRALTIGQMQGKFQMVVVR HTGHAIQEDVPEEFASHILNFIARNKIGPNGVEIPGLIKKWQH

Transcript Sequence

Transcript ID	Os04t0443500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:22087681:22093176:1 gene:Os04g0443500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Protein phosphatase methylesterase 1 (EC 3.1.1.-) (PME-1). Splice isoform 3. (Os04t0443500-01)
Sequence	AAACTCCCCAAACTCTCCAAACCCGCCTCCTACCCATTTCGCTCGCCGCCTCCGACGCCG CGGCCGCCGCCACCGCCACCCATGGAGCCCGCGCCGCTCGCCTCGCTGCAGGAGGAGGGT GAGGGGGAGCCCGGCGAGTCGCCGTCCTCCGCCGCCGCCGCCGTGCCGCCCCGCCCCGCC ACGCACCACTCGCTCCACAAGTACGCGCCGCTGGACTGGTCGGCCTACTTCGACGAGGAG CGCCGCGTCGCCATCCCCGACACCGAAGACGTTTTCAATGTGTACATGGCCAGATCGGAG GGGCCTGTCGTGTTCTGCCTGCATGGTGGCGGCTACTCCGGGCTTTCGTTTGCTCTAGCA GCAAGTCGTATGAAGGAAAAGGCTCGTGTTGTTTCTATGGATCTGCGAGGGCATGGAAAA TCAACCACAAGTGATGATTCAGATTTGTCCATTGAAACTCTCAGCAGCGATGTCATAGCT GTTTTACGCACATTGTATGGAGATTCTCCACCAGCCATTATACTTGTTGGGCATAGCATG GGCGGTTCTGTGGCTATACATGTGGCCGCAAAGAAAGTTATTCGCAATCTTCACGGTCTT GTTGTTATTGATGTAGTTGAGGGAACAGCAATGGCTTCATTGATTCATATGCAGAAGATC TTAGCAAATCGAGCGCAACATTTCCCTAGCATTGAAAAAGCTATTGAATGGAGTGTCAAA GGTGGGCCACTCAGGAACATTGATTCTGCTCGTGTTTCGATTCCATCTACCTTGAAATAT GATGAATCAAGGGAATGCTATACATATCGAACTCCTCTCGAGGAAACAGAAAAATACTGG AAAGGATGGTATGAAGGTCTTTCTGAAAAGTTCTTGTCTTGTCCAGTGCAAAAGGTCCTA TTATTAGCTGGAACTGATAGGTTGGACAGAGCTTTAACAATTGGTCAAATGCAAGGAAAG TTTCAAATGGTGGTGGTTCGACACACTGGACATGCCATACAGGAAGATGTGCCTGAAGAA TTTGCATCGCACATACTAAATTTCATAGCTCGCAACAAAATAGGTCCTAATGGTGTTGAG ATTCCTGGACTGATTAAAAAATGGCAGCATTAGACGGAACGGACCTTGCGTTCCAATGTT GACAGTTTTTAGGAAAACGATGAGGCTTCTATCTCCACCGGATTGCCATATTTTCCACAG GGTAGAAGGTGTTGCAAGAAGATTGGGGATATCATAGGCACGAGCGATCTAGGTTTAACC ATTCTGTTGCCGCTCGCCTTGATGCATGTCATGAGTGATTTTTATATGACACGGCTTGTG AATTCCTTTCATGGCAGGTTGTGAGAGTGAATAAAATGGAGTAATTTGACTGCTTTC