Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0442000-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:22006405:22012018:1 gene:Os04g0442000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUXIN RESPONSE FACTOR 9 description:Similar to Auxin response factor 2 (ARF1-binding protein) (ARF1-BP). (Os04t0442000-01)
Sequence	ATGGCCGCCGCGATGGAGATGGCGGCGAATCCAGGTGGTTCAGGAACCTGCAGCGATGCA CTATTCCGGGAGCTATGGCATGCTTGTGCTGGTCCGTTGGTCACGGTCCCGAAGCGCGGC GAGCGCGTCTACTACTTTCCCCAGGGTCATATGGAACAGCTTGAGGCGTCTACAAACCAG CAGCTTGACCAGTACCTGCCGATGTTCAATCTACCATCCAAGATCCTATGCAGCGTGGTC AACGTAGAACTCCGGGCGGAGGCTGATTCAGATGAAGTTTATGCTCAAATTATGCTGCAA CCAGAAGCTGATCAAAGTGAACTCACCAGTCTGGATCCTGAGCTTCAAGATCTTGAGAAA TGCACAGCTCATTCCTTTTGCAAGACATTAACAGCTTCAGATACAAGCACACATGGCGGT TTCTCTGTTCTTAGGAGGCATGCTGAAGAATGCCTTCCTCAGCTGGACATGTCTCAGAAT CCACCATGTCAAGAACTGGTTGCCAAAGATCTCCATGGAACTGAGTGGCATTTCCGTCAC ATCTTTCGTGGACAACCTAGGAGGCATCTGCTTACAACCGGTTGGAGTGTCTTTGTTAGC TCAAAAAGATTGGTTGCTGGCGATGCATTTATCTTCCTGAGGGGCGAAAGTGGTGAGCTA CGGGTTGGAGTAAGGAGACTTATGAGACAAGTAAATAACATGCCATCATCTGTCATATCA AGCCACAGCATGCATCTTGGAGTCCTTGCAACAGCTTCCCATGCTATCTCCACTGGAACC CTCTTTTCTGTTTTCTACAAACCCAGAACAAGCCGGTCTGAGTTTGTTGTGAGCGTTAAC AAGTACCTTGAAGCTAAGAAGCAGAACTTGTCTGTTGGAATGAGGTTTAAGATGAGATTT GAAGGTGATGAAGCTCCTGAAAGAAGGTTTAGTGGAACAATTATTGGTATTGGGAGTGTG CCAGCAATGTCAAAATCTCCATGGGCAGATTCTGACTGGAAATCTCTGAAGGTCCAATGG GATGAACCTTCGGCTATTGTCCGTCCAGATAGAGTTTCACCATGGGAACTGGAACCATTG GATGCGAGTAATCCACAACCACCTCAGCCTCCATTGAGGAATAAGCGTGCAAGGCCTCCA GCTTCACCTTCTGTGGTTGCGGAACTTCCTCCAAGTTTCGGACTATGGAAACCCCCATCT GAAGCAGCCCAAACTCTCTCATTTTCGGAACCACAACGGGCTCGAGAGATATTTCCTTCA ATTCCTGCATCAATCTTCTCAGCATCATCACATGTTGAATTCAATTCAAAGAACGAGCCA TCCATACTAAGCAATCAGTTCTACTGGTCAATGAGGGATTCAAAAACTGATTCTTTTTCT GCTAGCACTAACAAAACAAGAGTTGAAAGAAAGCAAGAACCAACTACTATGGGTTGCAGA TTATTTGGAATTGAAATAAGCTCAGCTGTAGAAGAAGCCCTGCCTGCAGCTACTGTTTCA GGTGTCGGTTATGATCAAACTGTTCTCTCTGTAGATGTGGACTCTGATCAGATCTCACAG CCATCTAATGGCAATAAATCCGATGCCCCTGGAACAAGCAGTGAACGTTCTCCTCTTGAG TCCCAAAGTCGTCAAGTGAGGAGCTGCACAAAGGTAATTATGCAAGGTATGGCAGTTGGG AGGGCTGTGGACTTGACAAAACTAAATGGTTATGGTGATCTTCGCAGCAAGTTGGAGGAG ATGTTTGATATACAGGGGGACTTGTGTCCCACCCTGAAGAGATGGCAAGTTGTTTACACC GATGATGAGGATGACATGATGCTTGTCGGGGATGATCCTTGGGATGAATTTTGTAGCATG GTGAAACGGATTTATATTTACTCCTACGAGGAGGCCAAGCTGCTGGCTCCAAAGTCTAAG CTGCCAGTCATAGGTGACACCATCAAATTGAGCAGTATGAACTCATCACATGAATCCGTC GACCTGGACAATCATGCCTCAGTTACTAACAGGGACTGCTAA

Peptide Sequence

PEP ID	Os04t0442000-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:22006405:22012018:1 gene:Os04g0442000 transcript:Os04t0442000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUXIN RESPONSE FACTOR 9 description:Similar to Auxin response factor 2 (ARF1-binding protein) (ARF1-BP). (Os04t0442000-01)
Sequence	MAAAMEMAANPGGSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQ QLDQYLPMFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLEK CTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRH IFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMPSSVIS SHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRF EGDEAPERRFSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPL DASNPQPPQPPLRNKRARPPASPSVVAELPPSFGLWKPPSEAAQTLSFSEPQRAREIFPS IPASIFSASSHVEFNSKNEPSILSNQFYWSMRDSKTDSFSASTNKTRVERKQEPTTMGCR LFGIEISSAVEEALPAATVSGVGYDQTVLSVDVDSDQISQPSNGNKSDAPGTSSERSPLE SQSRQVRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKRWQVVYT DDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLAPKSKLPVIGDTIKLSSMNSSHESV DLDNHASVTNRDC

Transcript Sequence

Transcript ID	Os04t0442000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:22006405:22012018:1 gene:Os04g0442000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUXIN RESPONSE FACTOR 9 description:Similar to Auxin response factor 2 (ARF1-binding protein) (ARF1-BP). (Os04t0442000-01)
Sequence	CAAAAGCCTCAAAGCCCAAGAGACCAGGGCGGCTACCTCCTCCTCCTACCACCACCGCCA CCACTAGTCCCCCCCCCTCCCCCTTCAGCCAAAGCCTGCGACTATCCGCAACCTCAACCT CAACCTCACGCAGCTCCCGCGCCAACCGCGACCTCCCGGATCCGGCCACGCCGCCCTTTT CCGGCGAGATCCACCTGCGGGAATTCCGTGGTTGTTGGAGGCGCCGCGGCCGATACAGGG CGGGGTGCGGTTAGATCCATGGAGATATGGAGATGGAGCTGAGCTGAGCTAGCAGCGGTA GTACAGATCGTGGCTCGCGCGTGGCGTCCCTGTCCGTTGGTTCCCGGCGGGTGGTGCTTT TGGGAGGAGTCGAGGAGGAGGAGGAGGAGGCATGGCCGCCGCGATGGAGATGGCGGCGAA TCCAGGTGGTTCAGGAACCTGCAGCGATGCACTATTCCGGGAGCTATGGCATGCTTGTGC TGGTCCGTTGGTCACGGTCCCGAAGCGCGGCGAGCGCGTCTACTACTTTCCCCAGGGTCA TATGGAACAGCTTGAGGCGTCTACAAACCAGCAGCTTGACCAGTACCTGCCGATGTTCAA TCTACCATCCAAGATCCTATGCAGCGTGGTCAACGTAGAACTCCGGGCGGAGGCTGATTC AGATGAAGTTTATGCTCAAATTATGCTGCAACCAGAAGCTGATCAAAGTGAACTCACCAG TCTGGATCCTGAGCTTCAAGATCTTGAGAAATGCACAGCTCATTCCTTTTGCAAGACATT AACAGCTTCAGATACAAGCACACATGGCGGTTTCTCTGTTCTTAGGAGGCATGCTGAAGA ATGCCTTCCTCAGCTGGACATGTCTCAGAATCCACCATGTCAAGAACTGGTTGCCAAAGA TCTCCATGGAACTGAGTGGCATTTCCGTCACATCTTTCGTGGACAACCTAGGAGGCATCT GCTTACAACCGGTTGGAGTGTCTTTGTTAGCTCAAAAAGATTGGTTGCTGGCGATGCATT TATCTTCCTGAGGGGCGAAAGTGGTGAGCTACGGGTTGGAGTAAGGAGACTTATGAGACA AGTAAATAACATGCCATCATCTGTCATATCAAGCCACAGCATGCATCTTGGAGTCCTTGC AACAGCTTCCCATGCTATCTCCACTGGAACCCTCTTTTCTGTTTTCTACAAACCCAGAAC AAGCCGGTCTGAGTTTGTTGTGAGCGTTAACAAGTACCTTGAAGCTAAGAAGCAGAACTT GTCTGTTGGAATGAGGTTTAAGATGAGATTTGAAGGTGATGAAGCTCCTGAAAGAAGGTT TAGTGGAACAATTATTGGTATTGGGAGTGTGCCAGCAATGTCAAAATCTCCATGGGCAGA TTCTGACTGGAAATCTCTGAAGGTCCAATGGGATGAACCTTCGGCTATTGTCCGTCCAGA TAGAGTTTCACCATGGGAACTGGAACCATTGGATGCGAGTAATCCACAACCACCTCAGCC TCCATTGAGGAATAAGCGTGCAAGGCCTCCAGCTTCACCTTCTGTGGTTGCGGAACTTCC TCCAAGTTTCGGACTATGGAAACCCCCATCTGAAGCAGCCCAAACTCTCTCATTTTCGGA ACCACAACGGGCTCGAGAGATATTTCCTTCAATTCCTGCATCAATCTTCTCAGCATCATC ACATGTTGAATTCAATTCAAAGAACGAGCCATCCATACTAAGCAATCAGTTCTACTGGTC AATGAGGGATTCAAAAACTGATTCTTTTTCTGCTAGCACTAACAAAACAAGAGTTGAAAG AAAGCAAGAACCAACTACTATGGGTTGCAGATTATTTGGAATTGAAATAAGCTCAGCTGT AGAAGAAGCCCTGCCTGCAGCTACTGTTTCAGGTGTCGGTTATGATCAAACTGTTCTCTC TGTAGATGTGGACTCTGATCAGATCTCACAGCCATCTAATGGCAATAAATCCGATGCCCC TGGAACAAGCAGTGAACGTTCTCCTCTTGAGTCCCAAAGTCGTCAAGTGAGGAGCTGCAC AAAGGTAATTATGCAAGGTATGGCAGTTGGGAGGGCTGTGGACTTGACAAAACTAAATGG TTATGGTGATCTTCGCAGCAAGTTGGAGGAGATGTTTGATATACAGGGGGACTTGTGTCC CACCCTGAAGAGATGGCAAGTTGTTTACACCGATGATGAGGATGACATGATGCTTGTCGG GGATGATCCTTGGGATGAATTTTGTAGCATGGTGAAACGGATTTATATTTACTCCTACGA GGAGGCCAAGCTGCTGGCTCCAAAGTCTAAGCTGCCAGTCATAGGTGACACCATCAAATT GAGCAGTATGAACTCATCACATGAATCCGTCGACCTGGACAATCATGCCTCAGTTACTAA CAGGGACTGCTAACCATTGACTTTGCCCTAATTCTGATATGATCATTTGAGGAAATTCCA ATGTTTCTTCATTACTGCTTCCTGTGCTGAAGACGCAACGCCCTTTTGTCTTGAATTGTG GTGGTATTTGAACTGCAAGTGCCAGGAAGTTCCCAAGACTGGCAAGACCGCCTGGAAGAG GCATTCTGGCAAATGCATGCCGTTCCAAATTGTTTTGTGTTTTGGTAGGAGCCTTGGCGT TCTTGTCTGGTGCCCAGATTTAGGTAAGAAGTCCTGAACACCAAGATTGATGACGCTTCG GCCCTCTCCCCGTTGCTTAGGAGTAAATAGGATTTGCATATGTATATATAGTATCATTAG GATTCCTGATTGCCTGCTATTGTGATTCCAAGTAATTTGGATGCATTAATGCAATTATTA TTCAGTAATTGTTATTTTTAGCAGCAAACCTGTGAGTGATGGTGGTGGATGTGTTGATCT TGCAGCATTTGCTACCTTTCTCTCCATTGTGGAAGCCATCTGTACATAAACAAACTACTA TCAAATAAGTAATGTTGTGCTTTCTAACC