Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0439900-03
CDS Infomation	cds chromosome:IRGSP-1.0:4:21887118:21892846:-1 gene:Os04g0439900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Translocon Tic40 precursor. (Os04t0439900-01);Similar to Translocon Tic40 precursor. (Os04t0439900-02);Similar to Translocon Tic40 precursor. (Os04t0439900-03)
Sequence	ATGGAGAGCCTGGTCCTCGCCTCCTCCTGCTCCGCTTCTCCCCGCCTGCCTCCCCTCTCC GCGGCCCGCCGCCGCCGCCCCTCCTCGCAGACTCTCCCGGCGACGGCTGCGGCGTCCGGG CGGAGGGGAGCTGGGAGGTCCAAGCTCGTCGTCGTCGCCGCCGCCGCCGCCGCGGCCCGC GGGTCCGGGAACGGTTTCGAGGGATTAAAGACAAATGGATTTGCAAGCATGTCGTCTTCG ACCAACAGTGAGAATATGTCAACTGGAACGGGTTCCCTACCTCCCATGCCACCCCCATCG TCATACATCGGTTCGCCTGTTTTCTGGATTGGAGTTGGTGTAGCATTGTCCGCAGCATTT TCTATGGTCTCTTCGATGGTAAAGAAATATGCAATGCAACAAGCATTCAAGTCAATGATG ACCCAGGCACCGCCAAACACTTTTGGCTCAAACTCGCCTTTCCCATTTGCCATGCCACCA CAGGCAGCTCCTGCAGCTCCTAGCAGTTACCCATACTCACAACCAAGGAAAGATACCTCT CCTCAATCTGCAACTGTCGATGTTTCAGCTACTAAAGTGGAAGCAACTGGAACTTTGGAA GAGGCTGATGTGGCTGAACAGCCAAAGAAGAAATTTGCCTTTGTTGACGTTTCTCCTGAA GAGTTGCAGCAAAAGGAACTTCAATCTTCACTGGAGACAGTGGATGTAAAAAGTGAGAGT AAACAGAGTGAAACTATGGAGGATACTGAGCAAAAAGCTCCAACAAATGGAACTGCTTTT AAGATGAATGAAGGTTCTGCTAGCGGGACAACTGAATCTAGCAATTCAGGGCCTATGTTG TCCGTTGATACAATTGAGAAAATGATGGAAGATCCAGCCGTGCAGAAGATGGTTTACCCC TATTTGCCTGAGGAGATGAGGAACCCTGATTCATTCAAGTGGATGCTGCAGAATCCAATG TACCGCCAACAACTACAGGATATGCTAAACAACATGGGTGGATCTCCTGATCAATGGGAT AACCGAATGCTCGATCACTTGAAGAATTTTGACCTTAGCAGTCCAGAAGTCAGGCAGCAG TTTGCGCAAGTTGGCATGACTCCAGAGGAGGTAGTATCGAAAATAATGGCAAACCCAGAA GTTGCTGTTGCATTCCAGAACCCAAAGATTCAAACAGCGATCATGGATTGCTCACAAAAC CCGCTCAATATTGTAAAATACCAGAACGACAAAGAGGTCATGGATGTTTTTATGAAGATA TCACAAATCTTCCCTCAAATTAATGGCTAG

Peptide Sequence

PEP ID	Os04t0439900-03
PEP Infomation	pep chromosome:IRGSP-1.0:4:21887118:21892846:-1 gene:Os04g0439900 transcript:Os04t0439900-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Translocon Tic40 precursor. (Os04t0439900-01);Similar to Translocon Tic40 precursor. (Os04t0439900-02);Similar to Translocon Tic40 precursor. (Os04t0439900-03)
Sequence	MESLVLASSCSASPRLPPLSAARRRRPSSQTLPATAAASGRRGAGRSKLVVVAAAAAAAR GSGNGFEGLKTNGFASMSSSTNSENMSTGTGSLPPMPPPSSYIGSPVFWIGVGVALSAAF SMVSSMVKKYAMQQAFKSMMTQAPPNTFGSNSPFPFAMPPQAAPAAPSSYPYSQPRKDTS PQSATVDVSATKVEATGTLEEADVAEQPKKKFAFVDVSPEELQQKELQSSLETVDVKSES KQSETMEDTEQKAPTNGTAFKMNEGSASGTTESSNSGPMLSVDTIEKMMEDPAVQKMVYP YLPEEMRNPDSFKWMLQNPMYRQQLQDMLNNMGGSPDQWDNRMLDHLKNFDLSSPEVRQQ FAQVGMTPEEVVSKIMANPEVAVAFQNPKIQTAIMDCSQNPLNIVKYQNDKEVMDVFMKI SQIFPQING

Transcript Sequence

Transcript ID	Os04t0439900-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:21887118:21892846:-1 gene:Os04g0439900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Translocon Tic40 precursor. (Os04t0439900-01);Similar to Translocon Tic40 precursor. (Os04t0439900-02);Similar to Translocon Tic40 precursor. (Os04t0439900-03)
Sequence	AGGGTTTTCCCTCCCCCCGCGCGCGCAGCAGGCGGCATGGAGAGCCTGGTCCTCGCCTCC TCCTGCTCCGCTTCTCCCCGCCTGCCTCCCCTCTCCGCGGCCCGCCGCCGCCGCCCCTCC TCGCAGACTCTCCCGGCGACGGCTGCGGCGTCCGGGCGGAGGGGAGCTGGGAGGTCCAAG CTCGTCGTCGTCGCCGCCGCCGCCGCCGCGGCCCGCGGGTCCGGGAACGGTTTCGAGGGA TTAAAGACAAATGGATTTGCAAGCATGTCGTCTTCGACCAACAGTGAGAATATGTCAACT GGAACGGGTTCCCTACCTCCCATGCCACCCCCATCGTCATACATCGGTTCGCCTGTTTTC TGGATTGGAGTTGGTGTAGCATTGTCCGCAGCATTTTCTATGGTCTCTTCGATGGTAAAG AAATATGCAATGCAACAAGCATTCAAGTCAATGATGACCCAGGCACCGCCAAACACTTTT GGCTCAAACTCGCCTTTCCCATTTGCCATGCCACCACAGGCAGCTCCTGCAGCTCCTAGC AGTTACCCATACTCACAACCAAGGAAAGATACCTCTCCTCAATCTGCAACTGTCGATGTT TCAGCTACTAAAGTGGAAGCAACTGGAACTTTGGAAGAGGCTGATGTGGCTGAACAGCCA AAGAAGAAATTTGCCTTTGTTGACGTTTCTCCTGAAGAGTTGCAGCAAAAGGAACTTCAA TCTTCACTGGAGACAGTGGATGTAAAAAGTGAGAGTAAACAGAGTGAAACTATGGAGGAT ACTGAGCAAAAAGCTCCAACAAATGGAACTGCTTTTAAGATGAATGAAGGTTCTGCTAGC GGGACAACTGAATCTAGCAATTCAGGGCCTATGTTGTCCGTTGATACAATTGAGAAAATG ATGGAAGATCCAGCCGTGCAGAAGATGGTTTACCCCTATTTGCCTGAGGAGATGAGGAAC CCTGATTCATTCAAGTGGATGCTGCAGAATCCAATGTACCGCCAACAACTACAGGATATG CTAAACAACATGGGTGGATCTCCTGATCAATGGGATAACCGAATGCTCGATCACTTGAAG AATTTTGACCTTAGCAGTCCAGAAGTCAGGCAGCAGTTTGCGCAAGTTGGCATGACTCCA GAGGAGGTAGTATCGAAAATAATGGCAAACCCAGAAGTTGCTGTTGCATTCCAGAACCCA AAGATTCAAACAGCGATCATGGATTGCTCACAAAACCCGCTCAATATTGTAAAATACCAG AACGACAAAGAGGTCATGGATGTTTTTATGAAGATATCACAAATCTTCCCTCAAATTAAT GGCTAGTGGATCGTCGCCGTGAGATTGCAGTTTTGATTTTTGTTGCCCTATCATCTCTTC CAAGTGGCTGCGGTAACATCTGTTGATCGGCTGAGTAAAAGGAAACGAAGTTCATCTGTT CAGTCATTACGGACAAGATGTAAAAGCTTTCCTGTCAGGGTTTTTTGAGTTGCCAATGTA CATCATCATATCGCCTAGTGTTTGGTTTGGTAGTGACCCTGCCTCAAGCCAGAGCAGGCA ACGAAGCGAAGTTAAGGATTTTTTTTATTTACATCCCCGCGCCCCCGTACAACTGTGTAG CTTGTGCTTTGACGTTACGAGGTTTGTGGTAGGTTGTGAAGATGCAGAGATAGTTCATAT CACCTCAATTTTGATAATATTATGTATTATATCTGTGTTAGCATTGC