Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0439600-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:21878937:21881780:-1 gene:Os04g0439600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CRINKLY4-RELATED protein 1 description:Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein. (Os04t0439600-01)
Sequence	ATGTCTCCACCTCACCTCCTCCTCCTCCTCCTAGCCCTCCTCCTCTCGCCGCCCCTCCTC CTCGCCTCCTCCTCCTTCCCCCTCCCCACCATCGCCATCGCCGCCGTCTCCAACTCCAGC TCCAACCCCTCCAAGCAGCATCTCGCGTGCGGGCTCGTGCCGGCGGCGGGGGGCGCGGCG GCGGGGTACAGGATCTCGTGCGCCAGCGTGTCGAACAGGTCGGCGGCGGCGCCGCACGTG TACGCGTATGGCGGGGACGGGACGTGCTCGCCGTACTCGGCGGTGGTCGCCGGGGACGGG TACCTGTGCTCGGCTGCGCCGACGTCGTCGCCGCCAATGTCGATGCGGTGGTGGGATCTG AACGAGGCCGGGGATGGGTCGAAGCGGGTGTACAGGGGGCGGGTGCTCTCGGCGGTGTCC GGCGGCGGGGAGTCCGTGTGCGGGCTCGTCGGGGAGAGGATGCAGTGCTGGAGGTGCCCG TGGGGGGAGGGCGCGCCGGCGAGGGTGGGGTTCTCGGCGGTGGCGGTGGGTGGCGGGTTC GTGTGCGGGTTGGTGGTGGGGAGCGGGGAGGTGAGGTGCTATGGTGGAGGGGAGGTGGTG GGGAGGGAGCCCGCGGGGAGGAGGTTCATGCTGCTCGCCGCCGGCGAGAGGCACGCGTGC GGCGTGGATGATGGCGGGGTGGTGGGTTGCTGGGGGGAGGCGGCGGCGGTGGCGGCCGCG TCGCCGCCGAGGATCAGCCGCGCGGTGTCGACGGTGGCGGTGGGCGACGCGGTCACGTGC GTGCTGTGGGGGAACTGGACGGTCTCGTGCTGGCCCGAGGGGGAGGCGTCGCCGCCGCCG GCGCTGGCGGGGCAGCAGTTCGTCGCGCTGGAGGCGAAGGGGAAGGTGGTGTGCGGGGTG CTCATGTCCGACTACTCGCTGCAGTGCTGGGGCGCAGGCGTCGCGGGCGGGGTGAGGAAG GTGTTCGACAAGGTGCTCCCGGGTCCGTGCGCGCCGTCGAAGTCGTGCTCGTGCGGCGTC TGGTCGGGCTCCGCGCAGCTCTGCGCCGGCAGCGGCGGGGGAGGCGGCGGAGACGTGTCC GTTTGTTACCCCTGCGGCTACACCCCTCCTCCGATGGCGCTGTCCCCGACGTCCAACTCG TCGTCGTCGTCGAGCTCTCAATCGAAGGGGAAGCGTCGCCCGAGCAATCTGGCGATAGCG TTGATCAGCGCCGGAGCTGGATCGGCGCTCGTGGCGCTCCTCGCCGCGCTCGCGGCGGTT TACTACCTGCGCCGGCACCGTGGCAGCAGCTCGCCGGTCTCCGGGCGCATCCACGCCGAG CCGACGGGCACGGCGCCGCGCGTGGAGCGGCGGCTCAGCGCGCTGCTCTCCAAGGGCCCG AACACGACGGTCGAGCAGTTCCCGCTGGTGGCGCTCCGCGCCGCCACCGACTGCTTCTCG CCGGCGAAGCGCATCGGCTCCGGCAGCTTCGGCGCGGTGTACCGCGCGTCCCTCCCCGAC GGCCGCGAGGTCGCCATCAAGCGCGCCGAGCGCCGCGACACGGGGGGCCCTTCCTCCTCC TCCGCCGCCGCGGCGCGGCGCGTCGACCACGAGGCGGCATTCGTCTCCGAGCTCGCGCTC CTCTCCCGCGTCAACCACAAGAACCTGGTCCGCCTCCTCGGCTTCTGCGCCGACGGCGGC GAGCGCATCCTCGTCTACGAGTTCATGCCCAACGGCACCCTCCACGACCACCTCCACAGG CGTGCGGCGTCGGCGGCGGCGCCGCTCTCCCCGCCGCTCGCCTCCTGGCCGTCCCGCCTC CGCCTCGCGCTCGGCGCCGCCCGCGGCATCGAGTACATGCACACCTACGCCGTCCCGCCC ATCATCCACCGCGACATCAAGTCCTCCAACATCCTCCTCGACTCCTGCTGGACCGCCAAG GTCTCCGACTTCGGCCTCTCCCTCCTCAACACCCTGGACGGTGACAATGCCGCCGCCGGC GACGGAGGCAATGCCGGCGACGGAGACGACGAGGAGCGGTGCGTGACGGCGGGGACGGTG GGGTACATGGACCCGGAGTACTACAGGCTGCAGCACCTGACGGACAAGAGCGACGTGTAC AGCTTCGGCGTCGTGCTGCTGGAGCTGCTGTCCGGGTGCAAGGCAATCCAGAAGTACGAG GGCAGCGGCTCGCCCAAGAACGTGGTGGACATGGCCGTGCCGCACATCGAGGGCGACCGG GTGCACCGGGTGCTCGACGCGAGGCTGCCGCTGCCGACGCCGTGGGAGATGGAGGCCGTC GCCTACGTCGGCTACCTGGCGGCCGACTGCGTCAGGCTGGCCGGCCGCGACCGCCCCACC ATGAGCGAGGTCGTGGGCGTGCTCGAGCGGGCCGTGGCGGCGTGCGACGAGTACGAGGAA GGCGGCGCCGGCGCCGGCGGCGAGCCCGCGCTGTCGCGGTCGTGCACCGATGGGTCCACG GCGACGTGA

Peptide Sequence

PEP ID	Os04t0439600-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:21878937:21881780:-1 gene:Os04g0439600 transcript:Os04t0439600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CRINKLY4-RELATED protein 1 description:Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein. (Os04t0439600-01)
Sequence	MSPPHLLLLLLALLLSPPLLLASSSFPLPTIAIAAVSNSSSNPSKQHLACGLVPAAGGAA AGYRISCASVSNRSAAAPHVYAYGGDGTCSPYSAVVAGDGYLCSAAPTSSPPMSMRWWDL NEAGDGSKRVYRGRVLSAVSGGGESVCGLVGERMQCWRCPWGEGAPARVGFSAVAVGGGF VCGLVVGSGEVRCYGGGEVVGREPAGRRFMLLAAGERHACGVDDGGVVGCWGEAAAVAAA SPPRISRAVSTVAVGDAVTCVLWGNWTVSCWPEGEASPPPALAGQQFVALEAKGKVVCGV LMSDYSLQCWGAGVAGGVRKVFDKVLPGPCAPSKSCSCGVWSGSAQLCAGSGGGGGGDVS VCYPCGYTPPPMALSPTSNSSSSSSSQSKGKRRPSNLAIALISAGAGSALVALLAALAAV YYLRRHRGSSSPVSGRIHAEPTGTAPRVERRLSALLSKGPNTTVEQFPLVALRAATDCFS PAKRIGSGSFGAVYRASLPDGREVAIKRAERRDTGGPSSSSAAAARRVDHEAAFVSELAL LSRVNHKNLVRLLGFCADGGERILVYEFMPNGTLHDHLHRRAASAAAPLSPPLASWPSRL RLALGAARGIEYMHTYAVPPIIHRDIKSSNILLDSCWTAKVSDFGLSLLNTLDGDNAAAG DGGNAGDGDDEERCVTAGTVGYMDPEYYRLQHLTDKSDVYSFGVVLLELLSGCKAIQKYE GSGSPKNVVDMAVPHIEGDRVHRVLDARLPLPTPWEMEAVAYVGYLAADCVRLAGRDRPT MSEVVGVLERAVAACDEYEEGGAGAGGEPALSRSCTDGSTAT

Transcript Sequence

Transcript ID	Os04t0439600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:21878937:21881780:-1 gene:Os04g0439600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CRINKLY4-RELATED protein 1 description:Regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein. (Os04t0439600-01)
Sequence	TTTCCCCTTCTCCATCTTCTTCCTCCTCCTCCCCAACTCGCGCCAACAATGGTCGTCTCC ACAAACTCCTCCTCCTCCTCCTCTCCTCCAACCCAATGTCTCCACCTCACCTCCTCCTCC TCCTCCTAGCCCTCCTCCTCTCGCCGCCCCTCCTCCTCGCCTCCTCCTCCTTCCCCCTCC CCACCATCGCCATCGCCGCCGTCTCCAACTCCAGCTCCAACCCCTCCAAGCAGCATCTCG CGTGCGGGCTCGTGCCGGCGGCGGGGGGCGCGGCGGCGGGGTACAGGATCTCGTGCGCCA GCGTGTCGAACAGGTCGGCGGCGGCGCCGCACGTGTACGCGTATGGCGGGGACGGGACGT GCTCGCCGTACTCGGCGGTGGTCGCCGGGGACGGGTACCTGTGCTCGGCTGCGCCGACGT CGTCGCCGCCAATGTCGATGCGGTGGTGGGATCTGAACGAGGCCGGGGATGGGTCGAAGC GGGTGTACAGGGGGCGGGTGCTCTCGGCGGTGTCCGGCGGCGGGGAGTCCGTGTGCGGGC TCGTCGGGGAGAGGATGCAGTGCTGGAGGTGCCCGTGGGGGGAGGGCGCGCCGGCGAGGG TGGGGTTCTCGGCGGTGGCGGTGGGTGGCGGGTTCGTGTGCGGGTTGGTGGTGGGGAGCG GGGAGGTGAGGTGCTATGGTGGAGGGGAGGTGGTGGGGAGGGAGCCCGCGGGGAGGAGGT TCATGCTGCTCGCCGCCGGCGAGAGGCACGCGTGCGGCGTGGATGATGGCGGGGTGGTGG GTTGCTGGGGGGAGGCGGCGGCGGTGGCGGCCGCGTCGCCGCCGAGGATCAGCCGCGCGG TGTCGACGGTGGCGGTGGGCGACGCGGTCACGTGCGTGCTGTGGGGGAACTGGACGGTCT CGTGCTGGCCCGAGGGGGAGGCGTCGCCGCCGCCGGCGCTGGCGGGGCAGCAGTTCGTCG CGCTGGAGGCGAAGGGGAAGGTGGTGTGCGGGGTGCTCATGTCCGACTACTCGCTGCAGT GCTGGGGCGCAGGCGTCGCGGGCGGGGTGAGGAAGGTGTTCGACAAGGTGCTCCCGGGTC CGTGCGCGCCGTCGAAGTCGTGCTCGTGCGGCGTCTGGTCGGGCTCCGCGCAGCTCTGCG CCGGCAGCGGCGGGGGAGGCGGCGGAGACGTGTCCGTTTGTTACCCCTGCGGCTACACCC CTCCTCCGATGGCGCTGTCCCCGACGTCCAACTCGTCGTCGTCGTCGAGCTCTCAATCGA AGGGGAAGCGTCGCCCGAGCAATCTGGCGATAGCGTTGATCAGCGCCGGAGCTGGATCGG CGCTCGTGGCGCTCCTCGCCGCGCTCGCGGCGGTTTACTACCTGCGCCGGCACCGTGGCA GCAGCTCGCCGGTCTCCGGGCGCATCCACGCCGAGCCGACGGGCACGGCGCCGCGCGTGG AGCGGCGGCTCAGCGCGCTGCTCTCCAAGGGCCCGAACACGACGGTCGAGCAGTTCCCGC TGGTGGCGCTCCGCGCCGCCACCGACTGCTTCTCGCCGGCGAAGCGCATCGGCTCCGGCA GCTTCGGCGCGGTGTACCGCGCGTCCCTCCCCGACGGCCGCGAGGTCGCCATCAAGCGCG CCGAGCGCCGCGACACGGGGGGCCCTTCCTCCTCCTCCGCCGCCGCGGCGCGGCGCGTCG ACCACGAGGCGGCATTCGTCTCCGAGCTCGCGCTCCTCTCCCGCGTCAACCACAAGAACC TGGTCCGCCTCCTCGGCTTCTGCGCCGACGGCGGCGAGCGCATCCTCGTCTACGAGTTCA TGCCCAACGGCACCCTCCACGACCACCTCCACAGGCGTGCGGCGTCGGCGGCGGCGCCGC TCTCCCCGCCGCTCGCCTCCTGGCCGTCCCGCCTCCGCCTCGCGCTCGGCGCCGCCCGCG GCATCGAGTACATGCACACCTACGCCGTCCCGCCCATCATCCACCGCGACATCAAGTCCT CCAACATCCTCCTCGACTCCTGCTGGACCGCCAAGGTCTCCGACTTCGGCCTCTCCCTCC TCAACACCCTGGACGGTGACAATGCCGCCGCCGGCGACGGAGGCAATGCCGGCGACGGAG ACGACGAGGAGCGGTGCGTGACGGCGGGGACGGTGGGGTACATGGACCCGGAGTACTACA GGCTGCAGCACCTGACGGACAAGAGCGACGTGTACAGCTTCGGCGTCGTGCTGCTGGAGC TGCTGTCCGGGTGCAAGGCAATCCAGAAGTACGAGGGCAGCGGCTCGCCCAAGAACGTGG TGGACATGGCCGTGCCGCACATCGAGGGCGACCGGGTGCACCGGGTGCTCGACGCGAGGC TGCCGCTGCCGACGCCGTGGGAGATGGAGGCCGTCGCCTACGTCGGCTACCTGGCGGCCG ACTGCGTCAGGCTGGCCGGCCGCGACCGCCCCACCATGAGCGAGGTCGTGGGCGTGCTCG AGCGGGCCGTGGCGGCGTGCGACGAGTACGAGGAAGGCGGCGCCGGCGCCGGCGGCGAGC CCGCGCTGTCGCGGTCGTGCACCGATGGGTCCACGGCGACGTGACGTGGCATGTCGTGGA ATGGAATGCCCCCATTTGCATGGTTGGCCTCCCTTGCGCAAGAACAACGGGGAGGAGAGT TTTCTTTTGAGGATTTTTTGTTTGTTTTATTGTTATTGCTTAGCATTAGTCACAGAACAT TCATTAGTATTTTATAGAAAAGAATCAAAATTTTAGTGTAAATGGTCTTCTGACATTGTT TTGATTTGAAATATTTTTGGGTTTTCTCCCCCCTTTTTTGTTCTTTTCTGGTCTTAATAT ACATATATTGAAGTCTTCCTCGAC