Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0439200-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:21853482:21856316:1 gene:Os04g0439200 gene_biotype:protein_coding transcript_biotype:protein_coding description:T-complex 11 family protein. (Os04t0439200-00)
Sequence	ATGGCGGTGGCGGCGATGGAGCTACCGGCGGTCCGAGCCTACGACGCCCTGGGGATCAAC GAGACGTCCGTCAAATCCATGCCGTTCGAAAACCTGGCCACGCTGATGCAGTCTCCGGCG ACGCTCCAGGCCACCAAGGCGGTGCTCGACCGGTTCGAGAAACTCTTGCCTCTTCTTTCA TCGCCGGTCATAAACATCGATCACCTCCTGAAACACCTTGGATCTCCAAAGAAGAAGAAG ACACCACCACCTGCTGCTGCTGCTAGCGCGTCTCGATACTCGCTGAGGGTAGTCCTCTGC TCCTACATGATCCTGGCTCATCCGGGTGCAGTGTTGAGTGGACAAGGGGAGAAGGAGAAG CTACTTATGGATTCAGCAGGAAGCTTTGTCAAGGAGTTTGAGCTATTGGTTAAGACTGTG CTTGAGAAGCAATCGACTGATGCTGCTGCCGGTCAGAAAATGTTCAGTGCTCAGCTGGCC GATTTCGATAGAGCATGGTGCGCTTACCTCTACTGCTTTGTGGTGTGGAAACTGAAGGAT GCGAAATCGCTGGAGGACGATCTTGTCCGGGCTGCGTGCAAGCTTGAGCTGTCGATGATG CAGACGTGCAAGCTAAGTTCAGATGGGCAGTCACATAATGGCCTCTCTCATGATATGAAG GCGATTCAGAAACAGGTTGCTGATGATCAGAAGCTGTTACGAGAGAAGGTTCATCAACTG AGTGGCGATGCAGGCATCGAGCGGATGAACTCTGCTCTTTCGGACACAAGGTCAAAGTTC TTTGAGGCGAAGGAGAACGGAAACCCATTAGCTGCATCAGTTGCAAACGTATCTACTCCT TTGAGCATTGGTTCGTCTGGATCGAGCTTCACTGCCCAATCTTTGCCTGGAGCTGCTTCA TCGCCAAGCAGTTCATCTCTGATGAAACAGCCGACGGACAATGAGCAAATGCTCAATGAG ATGCTTCACGAGGACGATGTTTCTTTTGGTGGCAACTCTGATAACGTCAGTTCCGCGGAG AAGGAGTTTCAGGCCAAAGTGAAATCGACGATGGAGAAAGCGTTTTGGGATCTGGTTACT GATTCGATGAAAGGGGACAAACCAGATTATACCCAACTAATTAACCTCGTGAAGGAAGTC AGGGATTCATTACATGAGTTGGCTTCCAAGGAGTTGAAGGAGGAAATCCTCGAGAACATT GACCTCGAAATTTTGTCACAGGTGCTCGAGTCAGGCTCCCAGGACACGCGATATCTGGGG CAGATTATGCACTACTCCCTGGATATGATCAGGAAACTATCTGCCCCTGCAAAGGAAGAT GACATGAAGAGGAGTCATGAGAAATTATTGAACGAGTTGGCTGCAAGTTCCGAAGTTAAT GACAATGGCATCAGCTCCTTTGTCATTGCTGTCATCAAGGGCCTGCGTTTCACTCTCGAA GAAATAAAGCAACTGCAATCTGAAGTTAGCAAGGCTCGCATCCAGCTCATGCAACCAATC ATAAAAGGCTCTGCCGGAGTGGAGTACCTGCAGAAGGCTTTCGCGGATCGCTATGGACCT CCTGCTAATGCATCAGCGTCTCTCCCTATAACTAAGCAGTGGGTTTCGGCAACGAAGAGC ATCGTGGAACAAGAGTGGAGCTCACATTTGGAGTCTCTCCAAGCTTTGCCAGCAGATCAT GCTCAACGCGTTGTTGTTCCGGCACTTCGAGCTGGTCACGGTGCTCCAATGGCTCAGGCT TCTTCGTCCGCAGCTAGCGGTTCTGGTCTCCCAGAATGCAAGGGTGAGAAGATCGACAAG CTGACAAGGGTTGGCTTGTTGCAACTTATCAGCAATGTGGAGGGCCTGAACATGCAGTCA ACCCCTGAGACCTTCCAAATTAATCTGCCGAGGTTGAGGGCTGTGCAAGATCAGTTTCAG AAGGTGATTGTGATCGCGACGAGCATTCTCGTCCTGCATCAAGTTCTGGTGTCGAAGGTC GCTGCTCCGGAGCTGCAGAACGCCATCTCGGAGCTCTACGACGCTCTCGTGAAGCTCCTC GACAGCAACCCCGACGCTTCGACGGAGGAGATCGTGGAGGCGATGGCGAGCTCTCTGGCG ACGGTCGGCTCTCTCTCTCTGCCGGAGAAGCAGGCTCAGGCCACGGCGGAGCTCGCGACC AAGATGCTCCTCAAGAGCCTCCAGGCCGGCGACGTCGTCTTCGGCAAGGTGTCCCGTACG GTCTACTGCGCGTTCCGCGGCGTCGTCCTCGGCGGCGGCGGCGTCAAGGGCAAGAAGCTG GCCGAAGCGCCGCTGCGACGCCTCGCCGCGGCGAAGCTCGCCGACAGGGTTGTCAAGGCC GGGGAGATGCTGATAAATATGGCAGTCATATCAGAGAAGGTCCATGGACAATGGTACAAG GCGCTTGCCTTGTGA

Peptide Sequence

PEP ID	Os04t0439200-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:21853482:21856316:1 gene:Os04g0439200 transcript:Os04t0439200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:T-complex 11 family protein. (Os04t0439200-00)
Sequence	MAVAAMELPAVRAYDALGINETSVKSMPFENLATLMQSPATLQATKAVLDRFEKLLPLLS SPVINIDHLLKHLGSPKKKKTPPPAAAASASRYSLRVVLCSYMILAHPGAVLSGQGEKEK LLMDSAGSFVKEFELLVKTVLEKQSTDAAAGQKMFSAQLADFDRAWCAYLYCFVVWKLKD AKSLEDDLVRAACKLELSMMQTCKLSSDGQSHNGLSHDMKAIQKQVADDQKLLREKVHQL SGDAGIERMNSALSDTRSKFFEAKENGNPLAASVANVSTPLSIGSSGSSFTAQSLPGAAS SPSSSSLMKQPTDNEQMLNEMLHEDDVSFGGNSDNVSSAEKEFQAKVKSTMEKAFWDLVT DSMKGDKPDYTQLINLVKEVRDSLHELASKELKEEILENIDLEILSQVLESGSQDTRYLG QIMHYSLDMIRKLSAPAKEDDMKRSHEKLLNELAASSEVNDNGISSFVIAVIKGLRFTLE EIKQLQSEVSKARIQLMQPIIKGSAGVEYLQKAFADRYGPPANASASLPITKQWVSATKS IVEQEWSSHLESLQALPADHAQRVVVPALRAGHGAPMAQASSSAASGSGLPECKGEKIDK LTRVGLLQLISNVEGLNMQSTPETFQINLPRLRAVQDQFQKVIVIATSILVLHQVLVSKV AAPELQNAISELYDALVKLLDSNPDASTEEIVEAMASSLATVGSLSLPEKQAQATAELAT KMLLKSLQAGDVVFGKVSRTVYCAFRGVVLGGGGVKGKKLAEAPLRRLAAAKLADRVVKA GEMLINMAVISEKVHGQWYKALAL

Transcript Sequence

Transcript ID	Os04t0439200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:21853482:21856316:1 gene:Os04g0439200 gene_biotype:protein_coding transcript_biotype:protein_coding description:T-complex 11 family protein. (Os04t0439200-00)
Sequence	ATGGCGGTGGCGGCGATGGAGCTACCGGCGGTCCGAGCCTACGACGCCCTGGGGATCAAC GAGACGTCCGTCAAATCCATGCCGTTCGAAAACCTGGCCACGCTGATGCAGTCTCCGGCG ACGCTCCAGGCCACCAAGGCGGTGCTCGACCGGTTCGAGAAACTCTTGCCTCTTCTTTCA TCGCCGGTCATAAACATCGATCACCTCCTGAAACACCTTGGATCTCCAAAGAAGAAGAAG ACACCACCACCTGCTGCTGCTGCTAGCGCGTCTCGATACTCGCTGAGGGTAGTCCTCTGC TCCTACATGATCCTGGCTCATCCGGGTGCAGTGTTGAGTGGACAAGGGGAGAAGGAGAAG CTACTTATGGATTCAGCAGGAAGCTTTGTCAAGGAGTTTGAGCTATTGGTTAAGACTGTG CTTGAGAAGCAATCGACTGATGCTGCTGCCGGTCAGAAAATGTTCAGTGCTCAGCTGGCC GATTTCGATAGAGCATGGTGCGCTTACCTCTACTGCTTTGTGGTGTGGAAACTGAAGGAT GCGAAATCGCTGGAGGACGATCTTGTCCGGGCTGCGTGCAAGCTTGAGCTGTCGATGATG CAGACGTGCAAGCTAAGTTCAGATGGGCAGTCACATAATGGCCTCTCTCATGATATGAAG GCGATTCAGAAACAGGTTGCTGATGATCAGAAGCTGTTACGAGAGAAGGTTCATCAACTG AGTGGCGATGCAGGCATCGAGCGGATGAACTCTGCTCTTTCGGACACAAGGTCAAAGTTC TTTGAGGCGAAGGAGAACGGAAACCCATTAGCTGCATCAGTTGCAAACGTATCTACTCCT TTGAGCATTGGTTCGTCTGGATCGAGCTTCACTGCCCAATCTTTGCCTGGAGCTGCTTCA TCGCCAAGCAGTTCATCTCTGATGAAACAGCCGACGGACAATGAGCAAATGCTCAATGAG ATGCTTCACGAGGACGATGTTTCTTTTGGTGGCAACTCTGATAACGTCAGTTCCGCGGAG AAGGAGTTTCAGGCCAAAGTGAAATCGACGATGGAGAAAGCGTTTTGGGATCTGGTTACT GATTCGATGAAAGGGGACAAACCAGATTATACCCAACTAATTAACCTCGTGAAGGAAGTC AGGGATTCATTACATGAGTTGGCTTCCAAGGAGTTGAAGGAGGAAATCCTCGAGAACATT GACCTCGAAATTTTGTCACAGGTGCTCGAGTCAGGCTCCCAGGACACGCGATATCTGGGG CAGATTATGCACTACTCCCTGGATATGATCAGGAAACTATCTGCCCCTGCAAAGGAAGAT GACATGAAGAGGAGTCATGAGAAATTATTGAACGAGTTGGCTGCAAGTTCCGAAGTTAAT GACAATGGCATCAGCTCCTTTGTCATTGCTGTCATCAAGGGCCTGCGTTTCACTCTCGAA GAAATAAAGCAACTGCAATCTGAAGTTAGCAAGGCTCGCATCCAGCTCATGCAACCAATC ATAAAAGGCTCTGCCGGAGTGGAGTACCTGCAGAAGGCTTTCGCGGATCGCTATGGACCT CCTGCTAATGCATCAGCGTCTCTCCCTATAACTAAGCAGTGGGTTTCGGCAACGAAGAGC ATCGTGGAACAAGAGTGGAGCTCACATTTGGAGTCTCTCCAAGCTTTGCCAGCAGATCAT GCTCAACGCGTTGTTGTTCCGGCACTTCGAGCTGGTCACGGTGCTCCAATGGCTCAGGCT TCTTCGTCCGCAGCTAGCGGTTCTGGTCTCCCAGAATGCAAGGGTGAGAAGATCGACAAG CTGACAAGGGTTGGCTTGTTGCAACTTATCAGCAATGTGGAGGGCCTGAACATGCAGTCA ACCCCTGAGACCTTCCAAATTAATCTGCCGAGGTTGAGGGCTGTGCAAGATCAGTTTCAG AAGGTGATTGTGATCGCGACGAGCATTCTCGTCCTGCATCAAGTTCTGGTGTCGAAGGTC GCTGCTCCGGAGCTGCAGAACGCCATCTCGGAGCTCTACGACGCTCTCGTGAAGCTCCTC GACAGCAACCCCGACGCTTCGACGGAGGAGATCGTGGAGGCGATGGCGAGCTCTCTGGCG ACGGTCGGCTCTCTCTCTCTGCCGGAGAAGCAGGCTCAGGCCACGGCGGAGCTCGCGACC AAGATGCTCCTCAAGAGCCTCCAGGCCGGCGACGTCGTCTTCGGCAAGGTGTCCCGTACG GTCTACTGCGCGTTCCGCGGCGTCGTCCTCGGCGGCGGCGGCGTCAAGGGCAAGAAGCTG GCCGAAGCGCCGCTGCGACGCCTCGCCGCGGCGAAGCTCGCCGACAGGGTTGTCAAGGCC GGGGAGATGCTGATAAATATGGCAGTCATATCAGAGAAGGTCCATGGACAATGGTACAAG GCGCTTGCCTTGTGA