Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0439100-03
CDS Infomation	cds chromosome:IRGSP-1.0:4:21844512:21848066:1 gene:Os04g0439100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525C06.4 protein. (Os04t0439100-01);T-complex 11 family protein. (Os04t0439100-02);Similar to H0525C06.4 protein. (Os04t0439100-03)
Sequence	CAGTTGCAAGAACAGCTAGAAAGCAAGCTTCAGAAGGCAAAAAGGCAGAGAGCTGAGTAC TTGAAGCAGCGGGTAAGTCCCCGTAGTTCTGCCCATGCTGATTACATCAAGCATGCAGAA TTTCTTTCAACAAAGCTGGCAAGATGCTGGAAAAGATTTTTGAAATCTAACAAGACAACA TATGCACTGGTTCAAGCTTATGACGCCTTGGGAATTAATGAGATGTCTGTCAAATCTATG CCATTTGAAAATTTAGCTATGTTGATGGAATCTCCAACGACTCTCCAGACCACCAAGGCA GTGCTTGACCGGTTCGAGAAACGTTTGCTTCTTTCTCAGCCAACTGGTTCATCATCAGCC GAGAACATTGATCACCTTCTGAAACGCCTTGGATCTCCAAAGAGGAAGGCACCTGCTAGC AGATCTAGGGTAGCTGCGAAAAAGCCAGCGAAGGGTTCCGAGACAAGCAAGCTTTCTAGA TACTCACTGCGGGTAGTCCTCTGCTCTTATATGATACTGGCTCATCCAGGTGCTGTATTA AGTGGACAAGGGGAGAAGGAGAATCTACTTATGGAGTCAGCAGAAAACTTTGTTAAGGAG TTTGAGCTATTGGTTAAGACAGTACTTGATAGACCAGGAGGTGCCTCGATGCAATCGACT GATGCTGCCAGTCAGAAAAAGTTCAGGACTCAGTTGGCTGCTTTTGATAAAGCATGGTGC GCTTACCTTTACCACTTTGTTGTGTGGAAACTGAAGGATGCCAAATCATTGGAACAAGAT CTTGTCAGGGCTGCATGCAAGCTTGAGCTGTCAATGATGCAAACATGCAAGTTAAGTTCA GATGGGCAGTCACATGACCTTTCTCATGATATGAAGGCAATTCAGAAACAGGTTACTGAT GACCAGAAGCTGTTAAGAGAGAAGATTCAGCACCTGAGTGGCGATGCAGGCATCGAGCGG ATGAACTCTGCTCTTTCGGATACAAGGTCAAAGTTCTTTGAGGCGAAGGAAAACGGAAAT CCATTAGCAACATCTGTTGCAAATGTATCTACTCCTTTGAGCATTAATTCATCTGGACAG GTTCCAAACCCTACTTCCAAGCCTACTGTGGAAGGATCAAGTTTCACTGCCCAATCTTTG CCTGGAGCTGCTTCATCGTCAAGCAGTACATCTCCAATGAAACCGCCGACGGACAATGAG CAAATGGTCAATGAGATGCTTCATGAGGACGATGTTTCTTTTGCTCGCAACTCTGATAAC GTCAGTTCCGCGGAGAAGGACTTTCAGGCCAAAGTGAAAGCAACGATGGAGAAAGCCTTT TGGGATCTTGTTACTGATTCGATGAGAGGGGACAAACCAGATTATAGCCAATTAATTAAC CTCGTAAAGGAAGTCAGGAATTCGTTACATGAGTTGGCCTCAAATGAGTTGAAGGAGGAA ATTCTTGAGAACATTGACCTCGAAATTTTGTCTCAGGTGCTTCAGTCAGGCTCCCAGGAC ACGCGATATCTGGGGCAGATTTTGCAGTACTCCCTGGATATGGTCAGGAAACTATCTGCC CCTGCAAAGGAAGATGACATGAAGAGGAGTCATGAGAAATTGTTAAACGAGTTGGCTGCA AGTTCCGAAGTTAATGACAATGGTATCAGCTCCTTTGTCATTGCTGTCATCAAGGGCCTG CGTTTCACTCTCGAAGAAATAAAGCAACTGCAAACTGAAGTTAGCAAGGCTCGCATCCAG CTCATGCAACCAATTATTAAAGGCTCTGCCGGAGTGGAATACCTGCAGAAGGCTTTCACG GATCGCTATGGACCTCCTGCTAATGCATCAGTGTCTCTCCCTATAACTAAGCAGTGGGTT TCGGCAACGAAGAGCATCGTGGAACAAGAGTGGAGCTCACATTTGGAGTCTCTCCAAGCT TTGCCAGCAGATCATGCTCAGCACGTTGTTCCGGTACTTCGAGCTGGTCACGGTGCTCCA GCGCCGCAGGCTTCTTCGTCTGCAGCTAGCAGTTCTGGTCTCCCAGAATGCAAGGGTGAG AAGATCGACAAGCTGACAAGGGTTGGCTTGTTGCAACTTATCAGCAATGTGGAGGGCCTG AACATGCAGTCAACCCCTGAGACCTTCCAAATTAATCTGCTGAGGTTGAGGGCTGTGCAA GATCAGTTTCAGAAGGTGATAGTGATCGCGACGAGCATGCTTGTCCTGCATCAAGTTCTG ATGTTGAAGATCGCTCCTCCGGAGCTACAGAATACCATCTCAGAGCTCTACGACGCTCTC GTGAAGCTCCTCGACAACAACGCTGACGCATCAACGAAGGAGATCGTGGAGGCGATGACG CGCTCTCTGGCCTCGGTCGGCTCTCTGCCGGAGGAACAGATTCAGGACACGACAGAGCTA GCAACCAAGATGCTTCTCAAGAGCCTCCAGGCCGGCGACATCGTCTTCGGTAAGGTGTCC CGGGCGGTCTACTTTGCCTTCCGCGGCGTCGTCCTCGGTGGCGGCGCCAAGGGCAAGAAG CTAGCCGAAGCGCCGCTGCGACGCCTCGGCGCGGCGAAGCTCGCCGACAGGGTTGTCAAG GCCGGGGAGGTGCTGATAAAGATGGCAGTCATATCAGAGAAGGTCCATGGACAATGGTAC AAGGCGCTTGCCTTGTGA

Peptide Sequence

PEP ID	Os04t0439100-03
PEP Infomation	pep chromosome:IRGSP-1.0:4:21844512:21848066:1 gene:Os04g0439100 transcript:Os04t0439100-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525C06.4 protein. (Os04t0439100-01);T-complex 11 family protein. (Os04t0439100-02);Similar to H0525C06.4 protein. (Os04t0439100-03)
Sequence	QLQEQLESKLQKAKRQRAEYLKQRVSPRSSAHADYIKHAEFLSTKLARCWKRFLKSNKTT YALVQAYDALGINEMSVKSMPFENLAMLMESPTTLQTTKAVLDRFEKRLLLSQPTGSSSA ENIDHLLKRLGSPKRKAPASRSRVAAKKPAKGSETSKLSRYSLRVVLCSYMILAHPGAVL SGQGEKENLLMESAENFVKEFELLVKTVLDRPGGASMQSTDAASQKKFRTQLAAFDKAWC AYLYHFVVWKLKDAKSLEQDLVRAACKLELSMMQTCKLSSDGQSHDLSHDMKAIQKQVTD DQKLLREKIQHLSGDAGIERMNSALSDTRSKFFEAKENGNPLATSVANVSTPLSINSSGQ VPNPTSKPTVEGSSFTAQSLPGAASSSSSTSPMKPPTDNEQMVNEMLHEDDVSFARNSDN VSSAEKDFQAKVKATMEKAFWDLVTDSMRGDKPDYSQLINLVKEVRNSLHELASNELKEE ILENIDLEILSQVLQSGSQDTRYLGQILQYSLDMVRKLSAPAKEDDMKRSHEKLLNELAA SSEVNDNGISSFVIAVIKGLRFTLEEIKQLQTEVSKARIQLMQPIIKGSAGVEYLQKAFT DRYGPPANASVSLPITKQWVSATKSIVEQEWSSHLESLQALPADHAQHVVPVLRAGHGAP APQASSSAASSSGLPECKGEKIDKLTRVGLLQLISNVEGLNMQSTPETFQINLLRLRAVQ DQFQKVIVIATSMLVLHQVLMLKIAPPELQNTISELYDALVKLLDNNADASTKEIVEAMT RSLASVGSLPEEQIQDTTELATKMLLKSLQAGDIVFGKVSRAVYFAFRGVVLGGGAKGKK LAEAPLRRLGAAKLADRVVKAGEVLIKMAVISEKVHGQWYKALAL

Transcript Sequence

Transcript ID	Os04t0439100-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:21844512:21848066:1 gene:Os04g0439100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525C06.4 protein. (Os04t0439100-01);T-complex 11 family protein. (Os04t0439100-02);Similar to H0525C06.4 protein. (Os04t0439100-03)
Sequence	CAGTTGCAAGAACAGCTAGAAAGCAAGCTTCAGAAGGCAAAAAGGCAGAGAGCTGAGTAC TTGAAGCAGCGGGTAAGTCCCCGTAGTTCTGCCCATGCTGATTACATCAAGCATGCAGAA TTTCTTTCAACAAAGCTGGCAAGATGCTGGAAAAGATTTTTGAAATCTAACAAGACAACA TATGCACTGGTTCAAGCTTATGACGCCTTGGGAATTAATGAGATGTCTGTCAAATCTATG CCATTTGAAAATTTAGCTATGTTGATGGAATCTCCAACGACTCTCCAGACCACCAAGGCA GTGCTTGACCGGTTCGAGAAACGTTTGCTTCTTTCTCAGCCAACTGGTTCATCATCAGCC GAGAACATTGATCACCTTCTGAAACGCCTTGGATCTCCAAAGAGGAAGGCACCTGCTAGC AGATCTAGGGTAGCTGCGAAAAAGCCAGCGAAGGGTTCCGAGACAAGCAAGCTTTCTAGA TACTCACTGCGGGTAGTCCTCTGCTCTTATATGATACTGGCTCATCCAGGTGCTGTATTA AGTGGACAAGGGGAGAAGGAGAATCTACTTATGGAGTCAGCAGAAAACTTTGTTAAGGAG TTTGAGCTATTGGTTAAGACAGTACTTGATAGACCAGGAGGTGCCTCGATGCAATCGACT GATGCTGCCAGTCAGAAAAAGTTCAGGACTCAGTTGGCTGCTTTTGATAAAGCATGGTGC GCTTACCTTTACCACTTTGTTGTGTGGAAACTGAAGGATGCCAAATCATTGGAACAAGAT CTTGTCAGGGCTGCATGCAAGCTTGAGCTGTCAATGATGCAAACATGCAAGTTAAGTTCA GATGGGCAGTCACATGACCTTTCTCATGATATGAAGGCAATTCAGAAACAGGTTACTGAT GACCAGAAGCTGTTAAGAGAGAAGATTCAGCACCTGAGTGGCGATGCAGGCATCGAGCGG ATGAACTCTGCTCTTTCGGATACAAGGTCAAAGTTCTTTGAGGCGAAGGAAAACGGAAAT CCATTAGCAACATCTGTTGCAAATGTATCTACTCCTTTGAGCATTAATTCATCTGGACAG GTTCCAAACCCTACTTCCAAGCCTACTGTGGAAGGATCAAGTTTCACTGCCCAATCTTTG CCTGGAGCTGCTTCATCGTCAAGCAGTACATCTCCAATGAAACCGCCGACGGACAATGAG CAAATGGTCAATGAGATGCTTCATGAGGACGATGTTTCTTTTGCTCGCAACTCTGATAAC GTCAGTTCCGCGGAGAAGGACTTTCAGGCCAAAGTGAAAGCAACGATGGAGAAAGCCTTT TGGGATCTTGTTACTGATTCGATGAGAGGGGACAAACCAGATTATAGCCAATTAATTAAC CTCGTAAAGGAAGTCAGGAATTCGTTACATGAGTTGGCCTCAAATGAGTTGAAGGAGGAA ATTCTTGAGAACATTGACCTCGAAATTTTGTCTCAGGTGCTTCAGTCAGGCTCCCAGGAC ACGCGATATCTGGGGCAGATTTTGCAGTACTCCCTGGATATGGTCAGGAAACTATCTGCC CCTGCAAAGGAAGATGACATGAAGAGGAGTCATGAGAAATTGTTAAACGAGTTGGCTGCA AGTTCCGAAGTTAATGACAATGGTATCAGCTCCTTTGTCATTGCTGTCATCAAGGGCCTG CGTTTCACTCTCGAAGAAATAAAGCAACTGCAAACTGAAGTTAGCAAGGCTCGCATCCAG CTCATGCAACCAATTATTAAAGGCTCTGCCGGAGTGGAATACCTGCAGAAGGCTTTCACG GATCGCTATGGACCTCCTGCTAATGCATCAGTGTCTCTCCCTATAACTAAGCAGTGGGTT TCGGCAACGAAGAGCATCGTGGAACAAGAGTGGAGCTCACATTTGGAGTCTCTCCAAGCT TTGCCAGCAGATCATGCTCAGCACGTTGTTCCGGTACTTCGAGCTGGTCACGGTGCTCCA GCGCCGCAGGCTTCTTCGTCTGCAGCTAGCAGTTCTGGTCTCCCAGAATGCAAGGGTGAG AAGATCGACAAGCTGACAAGGGTTGGCTTGTTGCAACTTATCAGCAATGTGGAGGGCCTG AACATGCAGTCAACCCCTGAGACCTTCCAAATTAATCTGCTGAGGTTGAGGGCTGTGCAA GATCAGTTTCAGAAGGTGATAGTGATCGCGACGAGCATGCTTGTCCTGCATCAAGTTCTG ATGTTGAAGATCGCTCCTCCGGAGCTACAGAATACCATCTCAGAGCTCTACGACGCTCTC GTGAAGCTCCTCGACAACAACGCTGACGCATCAACGAAGGAGATCGTGGAGGCGATGACG CGCTCTCTGGCCTCGGTCGGCTCTCTGCCGGAGGAACAGATTCAGGACACGACAGAGCTA GCAACCAAGATGCTTCTCAAGAGCCTCCAGGCCGGCGACATCGTCTTCGGTAAGGTGTCC CGGGCGGTCTACTTTGCCTTCCGCGGCGTCGTCCTCGGTGGCGGCGCCAAGGGCAAGAAG CTAGCCGAAGCGCCGCTGCGACGCCTCGGCGCGGCGAAGCTCGCCGACAGGGTTGTCAAG GCCGGGGAGGTGCTGATAAAGATGGCAGTCATATCAGAGAAGGTCCATGGACAATGGTAC AAGGCGCTTGCCTTGTGAAGAGCAGAATAGGGTTTGTGTTGTTTTGTGAATATACATTAC GGATTACGGACTGTAAATTCTTGTCCTACCGGGGTGAGGTAGGAAATATTGGGCATTGTA CATAAATTTATATAGGTGTTAATTGGTAGGCTGATTTCAGTGTCAAAAATTAATTCTGGG TGCAGGGCTAATATGGATGACCCTCACCCCAGAATTTAGCCAGTGGTTAGATGTGCTGAA TTGCACCTGGGTGTAAGTTAAATCTGATGTAATCTATTTGCTCTTGGAACTGAAATAATG TGAATATTTTAATTT