Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0438700-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:21818180:21823704:-1 gene:Os04g0438700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 28 description:Similar to Muscleblind-like protein. (Os04t0438700-01)
Sequence	ATGGCGTCCGCCGAGACCCCCAACCCCGACGCCGAAATCCCCAACACCGACGCCGCCGCC GCCGCCGACCCAGCTGCCGCCGCCCCAGCTGCCGCCGCCACCGACCCCGCCGCCGCTGGA TCGCCGTCGCCCCCGCTCCCGCCACGCAAACGCCGCCTCTCCCCTACGCCCTCCCCCACC CGCCGCTCCTCCCGCTCCCGCTCCCGCTCCCCGCGCCGCGGCCGCAGCCGCAGCCGCTCC CGGAGCAGGAGCCGCGGGCGGAGCGCCAGCCCGCGGTACCCCGATGGGAAGCGGAGGCGG CACAACGACCTCAACGTCGAGGTGTGCCGCGACTTCCTCCGCGACAGGTGCGCCCGCGCC GACATCGAGTGCAAGTACGCGCACCCGCACCCCACCGTCGCCGTCGACAGGGACAGCAAG GTGACGGCGTGCGCGGACTCGCTGCGGAACAACTGCTTCCGGGGAAGGACCTGCCGCTAC TACCACCCGCCCCCTCATATCCAGGAGTCATTATTGAGATCAATTGGTGTGGAAGACCCA AAGGTGAAGATGCAGGTTTGCAGAGATTTTACACGTGGACGATGTTCAAGATCAGCAAAC GAGTGCCGATTCTTGCACCATTCACCCCTTGAGGATTGTGCAATTGTTTGCCAAGATTTC TTGCGTGGGAGGTGTGATCGTAAATCATGTAGATACTCTCATGTTATGGCCCATCCAATG CCACCCCCAATGAGGGATATTCCCATGCAATACCCTGATATGGTTTACATGCCACCACCA GCACCCCTTGGAGTACCTATGATGATGCCTCCCCCTTCAGCCCCTGCAGCCTTTTCTGGT AATAACTACGGAGTGGAAGTTTGCAGGGACTACTTGAAGAACATGTGTAATAGAGAATCC TGCAGATTTGCACACCCGGATTTGAATAATGAGGTGATGAATACCCAAGTTGAAGTTTGC CGTGATTTTAAGCGAGGAGAATGCAATCGACCTGCCTGTCGCTTTTACCATCCACCTGCA AGCTCAAATTCTATTGGATAA

Peptide Sequence

PEP ID	Os04t0438700-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:21818180:21823704:-1 gene:Os04g0438700 transcript:Os04t0438700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 28 description:Similar to Muscleblind-like protein. (Os04t0438700-01)
Sequence	MASAETPNPDAEIPNTDAAAAADPAAAAPAAAATDPAAAGSPSPPLPPRKRRLSPTPSPT RRSSRSRSRSPRRGRSRSRSRSRSRGRSASPRYPDGKRRRHNDLNVEVCRDFLRDRCARA DIECKYAHPHPTVAVDRDSKVTACADSLRNNCFRGRTCRYYHPPPHIQESLLRSIGVEDP KVKMQVCRDFTRGRCSRSANECRFLHHSPLEDCAIVCQDFLRGRCDRKSCRYSHVMAHPM PPPMRDIPMQYPDMVYMPPPAPLGVPMMMPPPSAPAAFSGNNYGVEVCRDYLKNMCNRES CRFAHPDLNNEVMNTQVEVCRDFKRGECNRPACRFYHPPASSNSIG

Transcript Sequence

Transcript ID	Os04t0438700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:21818180:21823704:-1 gene:Os04g0438700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 28 description:Similar to Muscleblind-like protein. (Os04t0438700-01)
Sequence	CCTCCCTCCCCTCTCTCTCTCTCTCTCCTACCCTACCACCATGGCGTCCGCCGAGACCCC CAACCCCGACGCCGAAATCCCCAACACCGACGCCGCCGCCGCCGCCGACCCAGCTGCCGC CGCCCCAGCTGCCGCCGCCACCGACCCCGCCGCCGCTGGATCGCCGTCGCCCCCGCTCCC GCCACGCAAACGCCGCCTCTCCCCTACGCCCTCCCCCACCCGCCGCTCCTCCCGCTCCCG CTCCCGCTCCCCGCGCCGCGGCCGCAGCCGCAGCCGCTCCCGGAGCAGGAGCCGCGGGCG GAGCGCCAGCCCGCGGTACCCCGATGGGAAGCGGAGGCGGCACAACGACCTCAACGTCGA GGTGTGCCGCGACTTCCTCCGCGACAGGTGCGCCCGCGCCGACATCGAGTGCAAGTACGC GCACCCGCACCCCACCGTCGCCGTCGACAGGGACAGCAAGGTGACGGCGTGCGCGGACTC GCTGCGGAACAACTGCTTCCGGGGAAGGACCTGCCGCTACTACCACCCGCCCCCTCATAT CCAGGAGTCATTATTGAGATCAATTGGTGTGGAAGACCCAAAGGTGAAGATGCAGGTTTG CAGAGATTTTACACGTGGACGATGTTCAAGATCAGCAAACGAGTGCCGATTCTTGCACCA TTCACCCCTTGAGGATTGTGCAATTGTTTGCCAAGATTTCTTGCGTGGGAGGTGTGATCG TAAATCATGTAGATACTCTCATGTTATGGCCCATCCAATGCCACCCCCAATGAGGGATAT TCCCATGCAATACCCTGATATGGTTTACATGCCACCACCAGCACCCCTTGGAGTACCTAT GATGATGCCTCCCCCTTCAGCCCCTGCAGCCTTTTCTGGTAATAACTACGGAGTGGAAGT TTGCAGGGACTACTTGAAGAACATGTGTAATAGAGAATCCTGCAGATTTGCACACCCGGA TTTGAATAATGAGGTGATGAATACCCAAGTTGAAGTTTGCCGTGATTTTAAGCGAGGAGA ATGCAATCGACCTGCCTGTCGCTTTTACCATCCACCTGCAAGCTCAAATTCTATTGGATA AATATTGAGTGCCCTGCCCTGCTGCCGCTGCTACCGCTCTGCTGCTGCTAAATCTGCTAC TGCTGCCAAAGAGCTGCTGCGCTGGCTGTTGTGCTGCTTGCTAAGATGTCATAGACAATG AAAAGCCTAAAAAAGTTCTATGTAACAGAAGAGATTATCATCGTGTGATGTTTCAGAGGT TGCTTAAACTTGACTCAGTTCTTTCTCTCTTTAAAAAGGGGATTGCACGAGTGGTTGTGT ACTAGCCTTCATAAAGATGTTTTAATTTTGAGTTTGCCGTCTGC