Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0438400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:21795770:21797246:1 gene:Os04g0438400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 13 description:Similar to Pectin methylesterase-like protein. (Os04t0438400-01)
Sequence	GCCTCCGCCTCGCTCCAGTACCAGTACGACTGCTCCCACCTCCTCTCCCTCCCGGCCTTC CCCTCCCACCCCATCACCTCCCGCTTCCTCGCTTCCCTCGCCCCGCCGCGACCCGGCGCC GCCGCCACCACCAAACCCTCCTCCGCCAACGCCTACGCCGCCGCCTTTCCGGCGACCCTC CGCGCGCACGCCACCGTCTGCAACGCAAGCCCATCAGCGACGACGCAGCGGTCCGATTAC TCCACCGTGCAAGCCGCCATTGACGCGGCGCCGAACCACACCGCGGGGCATTTCGTCATC AAGGTGGCTGCAGGTATATACAAGGAGAATGTGGTAATTCCGTATGAGAAGACCAACATT TTGCTGGTGGGTGATGGGATTGGTGCTACCGTGATCACTGCCTCGCGGAGTGTGGGGATT GATGGGATTGGTACCTATGAAACTGCAACTGTTGCCGTCATCGGTGATGGTTTCCGGGCA AAGGATATAACATTCGAGAACGGCGCGGGTGCGGGAGCTCATCAGGCGGTGGCATTCCGG TCAGACAGTGACCGGTCGGTGCTGGAGAACGTCGAGTTCCGCGGCCACCAGGACACACTG TATGCTCGCACGATGCGGCAGCTGTATCGCCGGTGCCGTATCACGGGGACGGTCGATTTC ATATTCGGGAATTCAGCGGCGGTGTTTGAGGAATGCGTGATCAAGACGGTGCCACGGGCA GAGGGAGCTCGAAAGAGCGCGCGCAATGTGGTGGCGGCAAATGGGAGGATTGATCCAGGG CAGACAACGGGGTTTGTGTTCTGGAATTGCACACTTGATGGGAGCAAAGAGTTCTTAGCG TTGTTTCGGGCAAAGCCGGAGTCTTATCGGCTGTATTTGGGGCGCCCATGGAAGGAGTAT GCAATTACAGTGTATGCCGGATGTTATTTGGGGAAGGTTGTCAGGCCAGTGGGATGGCTT CCTTGGCGTGGGGAATTCGCACTCAGGACGCTATACTATGGGGAGTTTGACAGTCGAGGG CCTGGTGCAAATCACACGGCAAGGGTTGAGTGGAGCAGCCAGGCACCAGAACAATTTGTA GGAGTCTACTCAGTAGAGAACTTTATTCAGGGGCATGAATGGATTGCATACTAA

Peptide Sequence

PEP ID	Os04t0438400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:21795770:21797246:1 gene:Os04g0438400 transcript:Os04t0438400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 13 description:Similar to Pectin methylesterase-like protein. (Os04t0438400-01)
Sequence	ASASLQYQYDCSHLLSLPAFPSHPITSRFLASLAPPRPGAAATTKPSSANAYAAAFPATL RAHATVCNASPSATTQRSDYSTVQAAIDAAPNHTAGHFVIKVAAGIYKENVVIPYEKTNI LLVGDGIGATVITASRSVGIDGIGTYETATVAVIGDGFRAKDITFENGAGAGAHQAVAFR SDSDRSVLENVEFRGHQDTLYARTMRQLYRRCRITGTVDFIFGNSAAVFEECVIKTVPRA EGARKSARNVVAANGRIDPGQTTGFVFWNCTLDGSKEFLALFRAKPESYRLYLGRPWKEY AITVYAGCYLGKVVRPVGWLPWRGEFALRTLYYGEFDSRGPGANHTARVEWSSQAPEQFV GVYSVENFIQGHEWIAY

Transcript Sequence

Transcript ID	Os04t0438400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:21795770:21797246:1 gene:Os04g0438400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PECTIN METHYLESTERASE 13 description:Similar to Pectin methylesterase-like protein. (Os04t0438400-01)
Sequence	TCGCCTCCGCCTCGCTCCAGTACCAGTACGACTGCTCCCACCTCCTCTCCCTCCCGGCCT TCCCCTCCCACCCCATCACCTCCCGCTTCCTCGCTTCCCTCGCCCCGCCGCGACCCGGCG CCGCCGCCACCACCAAACCCTCCTCCGCCAACGCCTACGCCGCCGCCTTTCCGGCGACCC TCCGCGCGCACGCCACCGTCTGCAACGCAAGCCCATCAGCGACGACGCAGCGGTCCGATT ACTCCACCGTGCAAGCCGCCATTGACGCGGCGCCGAACCACACCGCGGGGCATTTCGTCA TCAAGGTGGCTGCAGGTATATACAAGGAGAATGTGGTAATTCCGTATGAGAAGACCAACA TTTTGCTGGTGGGTGATGGGATTGGTGCTACCGTGATCACTGCCTCGCGGAGTGTGGGGA TTGATGGGATTGGTACCTATGAAACTGCAACTGTTGCCGTCATCGGTGATGGTTTCCGGG CAAAGGATATAACATTCGAGAACGGCGCGGGTGCGGGAGCTCATCAGGCGGTGGCATTCC GGTCAGACAGTGACCGGTCGGTGCTGGAGAACGTCGAGTTCCGCGGCCACCAGGACACAC TGTATGCTCGCACGATGCGGCAGCTGTATCGCCGGTGCCGTATCACGGGGACGGTCGATT TCATATTCGGGAATTCAGCGGCGGTGTTTGAGGAATGCGTGATCAAGACGGTGCCACGGG CAGAGGGAGCTCGAAAGAGCGCGCGCAATGTGGTGGCGGCAAATGGGAGGATTGATCCAG GGCAGACAACGGGGTTTGTGTTCTGGAATTGCACACTTGATGGGAGCAAAGAGTTCTTAG CGTTGTTTCGGGCAAAGCCGGAGTCTTATCGGCTGTATTTGGGGCGCCCATGGAAGGAGT ATGCAATTACAGTGTATGCCGGATGTTATTTGGGGAAGGTTGTCAGGCCAGTGGGATGGC TTCCTTGGCGTGGGGAATTCGCACTCAGGACGCTATACTATGGGGAGTTTGACAGTCGAG GGCCTGGTGCAAATCACACGGCAAGGGTTGAGTGGAGCAGCCAGGCACCAGAACAATTTG TAGGAGTCTACTCAGTAGAGAACTTTATTCAGGGGCATGAATGGATTGCATACTAACTAC AATGTGAAGTGAAATTATTATATCAGTGTTTCTTGGTGGCAGTTCTACATCACAATTTTG AAAATTATCTTGAGACTACAAGATGCTCCAAAGGATCTGATGCCAACTGTATTGACACGG TACATAGGCCAACTGATGTGGTTTCTTTTGTGTTTAGTTGTACCTTAGTTTTGTTTTAAT GTTTGGTTGCGCTTTTGGGCTAGTGTCTGGTTACAGATTTTGTAATTGCGTTAATTCTTT TGTAGAATACATATCAAAAAATGGTTTGCTGCGGAATATTTTACAAGCTTATTTATGTTT TGCTCCTGCAATATAATTAGTTTGTGGTTGCCTCTGC