Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0434600-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:21609873:21620083:-1 gene:Os04g0434600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0102D10.3 protein. (Os04t0434600-00)
Sequence	ATGGGAGTCCCCTGGGCTTTGTTGGGTTTTTGGTCGTCACGGTGTCTCCGTGTTTCGTGG TGTAGTCCTAGAGAGATCAACAAGGGGGACGAGGTGGCGTGGTACGCCAACGGCGACAAC ATGGTGCGCAACGAGTACAATCCGAGTATCGCCTATGCTTTTGATAAAGTTTTTGGCCCT GCTACTACTACTCGTCATGTATATGATATTGCTGCTCAGCATGTTGTAAGTGGTGCTATG GAAGGAATCAATGGCACTGTTTTTGCGTATGGTGTAACTAGTAGCGGTAAAACTCACACC ATGCATGGGGAACAAAAATCACCTGGAATTATCCCATTGGCAGTGAAGGATGTTTTCAGC ATTATTCAAGATACACCTGGACGAGAATTTCTTCTACGAGTTTCATATCTTGAAATATAC AATGAGGTTATCAACGATTTACTTGATCCAATTGGACAAAATCTCAGAATTCGAGAAGAT GCACAGGGAACTTATGTGGAAGGGATAAAAGAAGAGGTTGTTTTATCACCTGCACATGCA CTCTCTCTAATAGCATCTGGCGAAGACTCTAACACTACGCAGACTATTGAGAGTAGCCCC TCTGGTGAGAATGATGAAGGAGAAGTCAAATTGTCTCAGTTGAATTTGATTGATCTTGCT GGGTCTGAGAGTTCCAAGACTGAAACAACTGGATTACGACGCAAAGAAGGTTCATACATA AACAAAAGTCTGCTCACCCTTGGAACTGTAATTGCTAAACTTACAGATGGTAAGGCTACC CATATTCCTTATAGAGACTCAAAGCTCACACGCTTACTTCAGTCCTCTCTTAGTGGGCAT GGGCGCATTTCTCTTATTTGCACAGTTACCCCTGCTTCCAGCAACAGTGAAGAGACACAT AATACATTAAAATTTGCCCACAGGAGCAAGCATATAGAAATAAAGGCTTCTCAAAATAAG ATAATTGATGAGAAGTCTTTGATAAAGAAGTATCAAAAAGAGATAACCTGCTTGAAAGAA GAGCTGCAGCAACTAAGACGTGGTATGATGGGTAATGGGTACATTCCTCCAACAGATCAA GAGGATCTTGTTAGCTTAAAACTGCAGCTTGAAGCTGGTCAAGTGAAACTCCAGTCAAGG CTAGAAGAGGAGGAAGAAGCAAAAGCTGCATTGATGGGTAGAATTCAGAGGTTAACAAAA TTGATATTGGTATCAACGAAAAGTTCCATATCCTCAAATGTTTCAGGAAAGGCTAGCCTC CGTCGACGGCATTCATTTGGGGAAGATGAGCTTGCTTATTTGCCTGATCGGAAGCGGGAG TACTCCATGGAGGATGATGATGTTAGTCTCGATTCAGAGTTTTCTGTTGAAGGAAAACTT GATTCTAACAATCCTGATGAGTCACTGAGGTTTGATAGAAGGAATCGCAGACGGGGAATG CTTGGTTGGTTCAAACTAAAGAAGTCAGATCAACTGTCAGGACTGTCGACTAGTGTAGAC AGTGAAAGCACAGCCAGCGGCTCACCTTCCTTTTCTAGATCATCGCAACAAAAACACCCG CTTCTTGACCTGAAGGATGGTCGAAGAAAATCTATGACTAGGAAAGGAGATGACCCAGCA CTTACTGATTCTTTTCCAGGGAGGACTCAAGCAGGTGATTTATTTAGTGCTGCATCTAGA GCACGGCACCATCTTCCGAGTGGAACAACTATCGTGGATCAAATTGATCTTCTTCAAGAG CAGGTTAAAATGCTGGCTGGGGAAGTTGCACTTTGTACAAGCTCACTCAAAAGGTTGTCA GAGCAAGCTGCAAACAATCCTGATGATTCACAAATTCAGGAACAAATTGAAAAATTGAAA AATGAAATTGACGAAAAGAAATCGCATATACGTGTGCTGGAGCAGCGTATGGCGCAATCA TTGGAAACTACCGAAGACCCAGCTATTAGGACTGAAATGTCCCAGACCTTTTCAAAGTTA AGCACACAATTGAGCGAGAAGACATTTGAGTTGGAGGTATCAGAAAATGCAGAACTCGTA GAAACAGTTGCTCAACTGAGGCAAGAAATTGATAATCTGTTGAAGACTGCCAAAAACGAG GATAATGTGGCTAGTATGCAGTCAAGTGAGCCATCAAGTACAAGCAGCAATCCTAGGGAT CTGGCAAATGAAGTTGCAAGTCATTCAAAAATGCCCTCTAGAACAACTGAAGATCATACG GAGTCACCACTGAAATCTCAAGTGCTCTTGCAGGCTGCAGAAATCGAGAATTTGAAGCTA GACAAGCTGAGGTTGGCAGAAGAGAAAGATGGGCTGGAAATTCACAGTCAAAAGCTGGCT GAAGAATCATCCTATGCTAAAGAATTGGCAGCTGCCGCTGCAGTTGAACTAAAGAACTTG GCAGAAGAAGTTACGAGGCTTTCTTATGAAAATGCAAAGCTGAATGCAGATTTAGCTGCA GCAAAAGATCAAACAAGGAGCAGTATCCAGAGTGACACAAAACGCCGTGATCAGGAGAAT GGAATCTTTGTAGAGGAGCTGCAGAAAGAGTTGGTTGCTAGCTGTCAGAGGGAGGCTGTG TTAGAGGACACATTGTCCCAAAGGGCCCGAAGAGAGAAGTTAAAGAAAGAAAATTCTCAG GAGGACTTGTTCCAATTCAAGGCAACACAAAATGGCTATCATTCATCGAAGAGTGATACT GGCAGGATGATGAGTGGAATGGAAGCTTCAGATAATAGGAACTGGGATGGTGTCAGTGTC AGCACTTATGAAGAAGCAAAAGCGGCATACAATGTTCAAAGAAGGCGCTGCAAAGAGTTG GAAGGCATTGTTTCCAGATTGAAGGGCGAGGATCTAAGAGGCTTAGATGTCAAAGTCCTG GAAGAGTTACAAAATTTTCATGTAGAAGCGTTGTCAAAGATTTGCCAAGAAAAGTATCTT TCTGCCCCTGCTTGGCTCATCTTCATTTATGCTTCACAGATGGCAAATCAGGTGCTATAG

Peptide Sequence

PEP ID	Os04t0434600-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:21609873:21620083:-1 gene:Os04g0434600 transcript:Os04t0434600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0102D10.3 protein. (Os04t0434600-00)
Sequence	MGVPWALLGFWSSRCLRVSWCSPREINKGDEVAWYANGDNMVRNEYNPSIAYAFDKVFGP ATTTRHVYDIAAQHVVSGAMEGINGTVFAYGVTSSGKTHTMHGEQKSPGIIPLAVKDVFS IIQDTPGREFLLRVSYLEIYNEVINDLLDPIGQNLRIREDAQGTYVEGIKEEVVLSPAHA LSLIASGEDSNTTQTIESSPSGENDEGEVKLSQLNLIDLAGSESSKTETTGLRRKEGSYI NKSLLTLGTVIAKLTDGKATHIPYRDSKLTRLLQSSLSGHGRISLICTVTPASSNSEETH NTLKFAHRSKHIEIKASQNKIIDEKSLIKKYQKEITCLKEELQQLRRGMMGNGYIPPTDQ EDLVSLKLQLEAGQVKLQSRLEEEEEAKAALMGRIQRLTKLILVSTKSSISSNVSGKASL RRRHSFGEDELAYLPDRKREYSMEDDDVSLDSEFSVEGKLDSNNPDESLRFDRRNRRRGM LGWFKLKKSDQLSGLSTSVDSESTASGSPSFSRSSQQKHPLLDLKDGRRKSMTRKGDDPA LTDSFPGRTQAGDLFSAASRARHHLPSGTTIVDQIDLLQEQVKMLAGEVALCTSSLKRLS EQAANNPDDSQIQEQIEKLKNEIDEKKSHIRVLEQRMAQSLETTEDPAIRTEMSQTFSKL STQLSEKTFELEVSENAELVETVAQLRQEIDNLLKTAKNEDNVASMQSSEPSSTSSNPRD LANEVASHSKMPSRTTEDHTESPLKSQVLLQAAEIENLKLDKLRLAEEKDGLEIHSQKLA EESSYAKELAAAAAVELKNLAEEVTRLSYENAKLNADLAAAKDQTRSSIQSDTKRRDQEN GIFVEELQKELVASCQREAVLEDTLSQRARREKLKKENSQEDLFQFKATQNGYHSSKSDT GRMMSGMEASDNRNWDGVSVSTYEEAKAAYNVQRRRCKELEGIVSRLKGEDLRGLDVKVL EELQNFHVEALSKICQEKYLSAPAWLIFIYASQMANQVL

Transcript Sequence

Transcript ID	Os04t0434600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:21609873:21620083:-1 gene:Os04g0434600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0102D10.3 protein. (Os04t0434600-00)
Sequence	ATGGGAGTCCCCTGGGCTTTGTTGGGTTTTTGGTCGTCACGGTGTCTCCGTGTTTCGTGG TGTAGTCCTAGAGAGATCAACAAGGGGGACGAGGTGGCGTGGTACGCCAACGGCGACAAC ATGGTGCGCAACGAGTACAATCCGAGTATCGCCTATGCTTTTGATAAAGTTTTTGGCCCT GCTACTACTACTCGTCATGTATATGATATTGCTGCTCAGCATGTTGTAAGTGGTGCTATG GAAGGAATCAATGGCACTGTTTTTGCGTATGGTGTAACTAGTAGCGGTAAAACTCACACC ATGCATGGGGAACAAAAATCACCTGGAATTATCCCATTGGCAGTGAAGGATGTTTTCAGC ATTATTCAAGATACACCTGGACGAGAATTTCTTCTACGAGTTTCATATCTTGAAATATAC AATGAGGTTATCAACGATTTACTTGATCCAATTGGACAAAATCTCAGAATTCGAGAAGAT GCACAGGGAACTTATGTGGAAGGGATAAAAGAAGAGGTTGTTTTATCACCTGCACATGCA CTCTCTCTAATAGCATCTGGCGAAGACTCTAACACTACGCAGACTATTGAGAGTAGCCCC TCTGGTGAGAATGATGAAGGAGAAGTCAAATTGTCTCAGTTGAATTTGATTGATCTTGCT GGGTCTGAGAGTTCCAAGACTGAAACAACTGGATTACGACGCAAAGAAGGTTCATACATA AACAAAAGTCTGCTCACCCTTGGAACTGTAATTGCTAAACTTACAGATGGTAAGGCTACC CATATTCCTTATAGAGACTCAAAGCTCACACGCTTACTTCAGTCCTCTCTTAGTGGGCAT GGGCGCATTTCTCTTATTTGCACAGTTACCCCTGCTTCCAGCAACAGTGAAGAGACACAT AATACATTAAAATTTGCCCACAGGAGCAAGCATATAGAAATAAAGGCTTCTCAAAATAAG ATAATTGATGAGAAGTCTTTGATAAAGAAGTATCAAAAAGAGATAACCTGCTTGAAAGAA GAGCTGCAGCAACTAAGACGTGGTATGATGGGTAATGGGTACATTCCTCCAACAGATCAA GAGGATCTTGTTAGCTTAAAACTGCAGCTTGAAGCTGGTCAAGTGAAACTCCAGTCAAGG CTAGAAGAGGAGGAAGAAGCAAAAGCTGCATTGATGGGTAGAATTCAGAGGTTAACAAAA TTGATATTGGTATCAACGAAAAGTTCCATATCCTCAAATGTTTCAGGAAAGGCTAGCCTC CGTCGACGGCATTCATTTGGGGAAGATGAGCTTGCTTATTTGCCTGATCGGAAGCGGGAG TACTCCATGGAGGATGATGATGTTAGTCTCGATTCAGAGTTTTCTGTTGAAGGAAAACTT GATTCTAACAATCCTGATGAGTCACTGAGGTTTGATAGAAGGAATCGCAGACGGGGAATG CTTGGTTGGTTCAAACTAAAGAAGTCAGATCAACTGTCAGGACTGTCGACTAGTGTAGAC AGTGAAAGCACAGCCAGCGGCTCACCTTCCTTTTCTAGATCATCGCAACAAAAACACCCG CTTCTTGACCTGAAGGATGGTCGAAGAAAATCTATGACTAGGAAAGGAGATGACCCAGCA CTTACTGATTCTTTTCCAGGGAGGACTCAAGCAGGTGATTTATTTAGTGCTGCATCTAGA GCACGGCACCATCTTCCGAGTGGAACAACTATCGTGGATCAAATTGATCTTCTTCAAGAG CAGGTTAAAATGCTGGCTGGGGAAGTTGCACTTTGTACAAGCTCACTCAAAAGGTTGTCA GAGCAAGCTGCAAACAATCCTGATGATTCACAAATTCAGGAACAAATTGAAAAATTGAAA AATGAAATTGACGAAAAGAAATCGCATATACGTGTGCTGGAGCAGCGTATGGCGCAATCA TTGGAAACTACCGAAGACCCAGCTATTAGGACTGAAATGTCCCAGACCTTTTCAAAGTTA AGCACACAATTGAGCGAGAAGACATTTGAGTTGGAGGTATCAGAAAATGCAGAACTCGTA GAAACAGTTGCTCAACTGAGGCAAGAAATTGATAATCTGTTGAAGACTGCCAAAAACGAG GATAATGTGGCTAGTATGCAGTCAAGTGAGCCATCAAGTACAAGCAGCAATCCTAGGGAT CTGGCAAATGAAGTTGCAAGTCATTCAAAAATGCCCTCTAGAACAACTGAAGATCATACG GAGTCACCACTGAAATCTCAAGTGCTCTTGCAGGCTGCAGAAATCGAGAATTTGAAGCTA GACAAGCTGAGGTTGGCAGAAGAGAAAGATGGGCTGGAAATTCACAGTCAAAAGCTGGCT GAAGAATCATCCTATGCTAAAGAATTGGCAGCTGCCGCTGCAGTTGAACTAAAGAACTTG GCAGAAGAAGTTACGAGGCTTTCTTATGAAAATGCAAAGCTGAATGCAGATTTAGCTGCA GCAAAAGATCAAACAAGGAGCAGTATCCAGAGTGACACAAAACGCCGTGATCAGGAGAAT GGAATCTTTGTAGAGGAGCTGCAGAAAGAGTTGGTTGCTAGCTGTCAGAGGGAGGCTGTG TTAGAGGACACATTGTCCCAAAGGGCCCGAAGAGAGAAGTTAAAGAAAGAAAATTCTCAG GAGGACTTGTTCCAATTCAAGGCAACACAAAATGGCTATCATTCATCGAAGAGTGATACT GGCAGGATGATGAGTGGAATGGAAGCTTCAGATAATAGGAACTGGGATGGTGTCAGTGTC AGCACTTATGAAGAAGCAAAAGCGGCATACAATGTTCAAAGAAGGCGCTGCAAAGAGTTG GAAGGCATTGTTTCCAGATTGAAGGGCGAGGATCTAAGAGGCTTAGATGTCAAAGTCCTG GAAGAGTTACAAAATTTTCATGTAGAAGCGTTGTCAAAGATTTGCCAAGAAAAGTATCTT TCTGCCCCTGCTTGGCTCATCTTCATTTATGCTTCACAGATGGCAAATCAGGTGCTATAG