Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0434500-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:21600673:21601888:-1 gene:Os04g0434500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zinc finger homeodomain class homeobox transcription factor 8 description:Homeodomain-related domain containing protein. (Os04t0434500-00)
Sequence

ATGATGGATCACCTGAGCCTGGTGCCCTACGAGGGCGGCAGCGCCGGCGGGGGAGGAGGT
GGAGGGAAGTACAAGGAGTGCATGCGGAACCACGCGGCGGCGATGGGCGGGCAGGCGTTC
GACGGGTGCGGGGAGTACATGCCGGCGTCGCCCGACTCGCTCAAGTGCGCCGCGTGCGGC
TGCCACCGCAGCTTCCACCGCCGCGCCGCCGCGGGCATCGGCGGCGGGCCGGTGTTCTTC
CGCCCGCCGCCACCGCCGCAGCCGCACTCGCACCACGCCGCGCTGCAGGGCTTCCTCCCG
TCGTCCGTGCCGGCGCCGGCGCCGCCGCCGCAGCTCGCGCTGCCGTACCACGCCGTGCCC
GCCGCGGCGTGGCACCACGCGGCGGCGGCGGCGGCAGGCCGCGCCGGCTCGGAGACGCCC
CCGCGGATGGACGACTTCGGCCCCGGCAGCGCCGGCGGGAGCGGGAGCGGCGGCGGCGGC
ATCTTCGGGCGGAAGCGGTTCCGGACCAAGTTCACGCCGGAGCAGAAGGAGCGGATGCGG
GAGTTCGCCGAGAAGCAAGGGTGGCGCATCAACCGCAACGACGACGGCGCCCTGGACCGC
TTCTGCGTCGAGATCGGCGTCAAGCGCCACGTCCTCAAGGTCTGGATGCACAACCACAAG
AACCAGCTCGCCTCCTCCCCGACCTCCGCCGCCGCCGCCGCCGCCGGCGTCATGAACCCC
GGCGCCGGCATCGGCCTCGGCACCGGCCTCGGCACCGGCATCAGCGGCGACGGCGACGGC
GACGACGACGACACCGACGACTCCCCGCCCCGCGCCGCCGTGTCCTCCCCCTCCCCTTCA
CCGATCAGCGTCTAG

Peptide Sequence

PEP ID

Os04t0434500-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:21600673:21601888:-1 gene:Os04g0434500 transcript:Os04t0434500-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zinc finger homeodomain class homeobox transcription factor 8 description:Homeodomain-related domain containing protein. (Os04t0434500-00)
Sequence

MMDHLSLVPYEGGSAGGGGGGGKYKECMRNHAAAMGGQAFDGCGEYMPASPDSLKCAACG
CHRSFHRRAAAGIGGGPVFFRPPPPPQPHSHHAALQGFLPSSVPAPAPPPQLALPYHAVP
AAAWHHAAAAAAGRAGSETPPRMDDFGPGSAGGSGSGGGGIFGRKRFRTKFTPEQKERMR
EFAEKQGWRINRNDDGALDRFCVEIGVKRHVLKVWMHNHKNQLASSPTSAAAAAAGVMNP
GAGIGLGTGLGTGISGDGDGDDDDTDDSPPRAAVSSPSPSPISV

Transcript Sequence

Transcript ID

Os04t0434500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:21600673:21601888:-1 gene:Os04g0434500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:zinc finger homeodomain class homeobox transcription factor 8 description:Homeodomain-related domain containing protein. (Os04t0434500-00)
Sequence

AACACCAACAAACACCGCGCCTCGCCTCGTCTCCTCCGATAGCGACGCCGCCGCCGCCGC
CGCCACCGACGCCGGGAGTGACAGCGAGTGAGATCGTCATGATGGATCACCTGAGCCTGG
TGCCCTACGAGGGCGGCAGCGCCGGCGGGGGAGGAGGTGGAGGGAAGTACAAGGAGTGCA
TGCGGAACCACGCGGCGGCGATGGGCGGGCAGGCGTTCGACGGGTGCGGGGAGTACATGC
CGGCGTCGCCCGACTCGCTCAAGTGCGCCGCGTGCGGCTGCCACCGCAGCTTCCACCGCC
GCGCCGCCGCGGGCATCGGCGGCGGGCCGGTGTTCTTCCGCCCGCCGCCACCGCCGCAGC
CGCACTCGCACCACGCCGCGCTGCAGGGCTTCCTCCCGTCGTCCGTGCCGGCGCCGGCGC
CGCCGCCGCAGCTCGCGCTGCCGTACCACGCCGTGCCCGCCGCGGCGTGGCACCACGCGG
CGGCGGCGGCGGCAGGCCGCGCCGGCTCGGAGACGCCCCCGCGGATGGACGACTTCGGCC
CCGGCAGCGCCGGCGGGAGCGGGAGCGGCGGCGGCGGCATCTTCGGGCGGAAGCGGTTCC
GGACCAAGTTCACGCCGGAGCAGAAGGAGCGGATGCGGGAGTTCGCCGAGAAGCAAGGGT
GGCGCATCAACCGCAACGACGACGGCGCCCTGGACCGCTTCTGCGTCGAGATCGGCGTCA
AGCGCCACGTCCTCAAGGTCTGGATGCACAACCACAAGAACCAGCTCGCCTCCTCCCCGA
CCTCCGCCGCCGCCGCCGCCGCCGGCGTCATGAACCCCGGCGCCGGCATCGGCCTCGGCA
CCGGCCTCGGCACCGGCATCAGCGGCGACGGCGACGGCGACGACGACGACACCGACGACT
CCCCGCCCCGCGCCGCCGTGTCCTCCCCCTCCCCTTCACCGATCAGCGTCTAGCTAGACA
GCCAGACACACTGTCACTGGCACACACTAGCTTAGCCTTAGCCTAGCTTAGCTTAGCTAG
CTAATGAGTTCACTTAATCACTAGGGTTTAATTAGCTCTAATTCAACTAGCAATATCCCA
TGGATTAATTAGCCGCTAGTCGCTCAGTTCCGCGTTAATTAATTAATGACCCACTTCCCT
CCTGCCCCCCGCACCGCGGCCGTGGTAAGCTAATGGAGGTCATATCTGTAATTTCTCCCC
CCACTAGTACTACTCT