Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0433900-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:21559486:21565988:-1 gene:Os04g0433900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os04t0433900-00)
Sequence	ATGGATGCGAAAGACTTGGTGGAAATAGGCATGAAGGAGGAGGACATTACAACAATGCTG TTTGGAAAGAAGGTTATCGAGCTGACGGAAGACGCATTTGATGGTTCGAAAGAAGAAAGG AAGATCTTTGAGGAGCTCTTCTGCAGAACAGGCACTAGCGGAGCAAGCACCCGCCATCCA CGCCGGGATGGAAAGAGCAGTTCACTGAGAGATGCAAGCAAAGAATTGATATCAACTAAC ACACCTTCGAGCTCTGCCTCCAATCACAAGTCGGCGCGCTGCCGTGTGGTTGAGTCTTTT ACATATGGCAACTTATCAAGCTATCTTGTGTTCTGCAACAATGACAAACAAAAAATGCAG AAGACAGTGGGCTTTCCGGATATGGCCAGTGCTTCTGATCTCGTGATACAGTGGACACCG CCTTCCGTTGAGAGGGTGTACACCCGTAGGGCAGTGGCTCGCAGGAACCAAAGAGCAAAA CTTTGCAGTGTTCTTGATCTGGAGAGGGTTGACATTACCAGTGTTAGACAGCGTAGGGAC AGAGGGCAGCATAAGTATGGCCACAGCCATGCAGTGCTTTGGGATCATCTCCGTCTACAC GCTAATCTTCTGATGATGGATGCTGGGTGGAAGATTGATGGCAAGGAAAGATGGGACAAG AGTAAGGTTGATCATATTTATGAGTCACCTGACAAAGTAATGCGCCTGTTTTCTCTTCCC AGGGCATGGAAATGCTTTGGCCAGTGGTTGCTTATTAATTCATCCGGCTTTGGTGGAAAT GACTACGGTCGGATATGGTTCAACATCCATGACTTTCTGAGTGATTTGAAGAATACACTG CTATGCTTAGAATATGAAGTCCGGCTCCCGAAGCAATCTCTATCTTTTCTCAACCAGTGG CAGCTCCTTGACCCTTTCATGGCAGTAGTTTGCATTGATAAGAAGGTTAGAGCCCTGAAG AAGGGAGTAGCACTGAAAGCTGTAAACAGCACTGTTACATTTGTCAGCTGCATCGAGAGT GAGCTGTCAAATCCCCGGAATGCCGACAATCCACTTGGTCTAAACCATTCGAACAATTTT AACAGCACACATCCCAGGTCACGGAAAAATCTTCTGCCACTGCTTCAATCTGATGACCTC GATGGAAATTCTTCGCGCAGCAAACATCCTTCTACTGTTGGAAAACGTAAATCTAGCCAA TATAAAATGGATGAAAGATTGCCAATCATGGCAGAAATACAAGAAAAAAGCATCAGAAGT ACTGCTCATCGTATAGTGATGGGTCTCCAAGATTCAACAGCTTTTCCTGGTTCAAGGACT AGTTTAAATATGAAAAATAAGCCTTCATACAGCAAGTCTAATTTGACACAGAGCATTCAA GACAAATCTGATCCACTATATTTTCCACCTAATTATTCTCCCAGTGATCTTGTTGAAAAT GCTGAAATAAATGATCCGAGTTTTCATGCCTATGACATGATAGAATCTGCAAACGTGGAC AATTCTGCAGATAGTCCTGACGAGTTGCTCCTAGGAGCAAACTTACTGTTTTCTCACGAA GTGGACGAGATGCTCCTTGACGACATCAGCAATGAACATTACTGTACTGCAGCTGTTTCT GAGCCACAAGCAAAAAACATAGATTTAGAGGATGGACCGTCTGGTCCATCATCAGTAGTA TCAGAGAAGGACACAGGTTTGAAAGCTAATAAAGATGTTATCAACAATGAACAGCATGAT GATGGAGTTGTCGCTGAGTCCCAATTGGCAAATACAGATGTGATGGATAGACCTGCTGGT GCACTGTCATTTCTACCAACGATGGATACAGTTTTGGAAGGTAATGAGATGAGCTCAGAA GAGATGACAAAAGGAGGGCAGTTATCATGTGAAGGCACCAACAATGCGATGGTGATATCG GAGCCACAGTTATTGTTTGTGTCCCCTCATGATGGAACCCTTTCTTTCATGAATGATAGT ATGTGCAGCCAAGAGATGCGGAGTTGCCTCAATGCTTCAAATGGCACCATGGGGACTAAC GTGCAGCTAGGCATCCAATCCTCAGTATATGAAGCAAGTTTGATTCGGGGATTCCTATAC CTTGACAATGAGGGTTCTCCAATTTGTTGGACGGTCCTAAACCCAGAACCTCCTAGGCAG TTGATCTGTTCTGAACCAATCTCAAAGGCATCTGAACTTCATGGTGAAATGAACATGGAG TGTGGGATGTTAACTTCTGGACCGAAGCAAACGTCAAAATTAGACTCGAGCAAAAACAAT CGGAAAAGGTCCAAGAAAGCTGCAAATATTGAAGACAAAGGCAGTCAAAAGAAACAGAAG GTAAATGATGTTCCTGTAAGTTACTGCGCAATTGGTCAATATATGGACCATACAACTGAG AATCCTGCTGGCTGTTTAATTAGCAATGATAAAGAACAGATAGGTTCAGCAAGCACTGAG CAGGTTTCATTAAACTTGTTGCCTGGAAATAGCAATGACATGAATCAGCAAGTTCCCATA AAAAATAGTGACAATGATCAAGCCAGAGTACGCATTGGGTCAGCAGAAAAGATTGTGCCA GAAAAAACTACCAAAAAAGATGTCAAACGGCAAAAGGCATCATCGCGGCATAAATGCAAG TTTGACGACAATGATCTTCTGGTGACAGCTGTCATACATAAGTTAACTGCACGCTACAGG AATCGTTTTAGCCGAAGGCTCGCCAAGAAATCTGGTTTCAAACGTCTACCTAGATGTCGC TGGAAGAGTGAAGAGAGACGTGACAGGAAGACGTTTCCTAAAGGAGCAAGAACAGTGTTG GGAAAGTTGCTTGAAATGGGCATTGTTTGTAAAGTAAATATTCTTCAATATCGAAGACCA GGAAGCAAAAATGTATTAAAGGATGGAAACATTACAAAGAAGGGCATTAGATGCCGATGC TGTGATATGGTGTTTACAATGTCCATGTTTAAGTACCATGCAGGTCTGCGGCAAGAAATT CCCTCTCTGAATCTTTTCTTGGGTTCTGGCAAATCATACACTCTTTGCCAGCTTCAAGCA TGGTCTATTGAACATAAGGCCAGGAAAGAACGTGCAAAATGTACTATGCCACTCCAAGCT GATGAAAATGATGATACTTGTGGATTATGTGGTGATGGCGGTGAACTGATATGCTGCGAC AACTGTCCTGCTAGTTACCATCAGGACTGCTTGCCTTGTCAGGATATTCCAGATGGCAGC TGGTATTGCTATAGATGCCTTTGCGATATATGTGGGGAAGTGATAAATTTGAAGGAGCTC AGAAGTTCCCTGCCTGCTTTAGAATGCGCACAGTGTGAACGCCAATATCATGCAAAATGC ATATATGGTAAACTTTTGTGCAACGAGGAAGGTGGACCTTGTGCCTGGTTTTGTGGAAGA AGATGCCAGCAGATTTATATGAATTTGCGATCTCGTGTTGGGATCCCCATTCACACAATT GATGGCTTCTCTTGCACTGTTCTCCGGAACAACGGTGATCAACGGGTCTCTACAGCTGCA GATATTGCAATCCTCGCTGAGTGCAACATGAAATTAGTGATTGCCTTGAGTATAATGGAA GAATGCTTCTTACCTATAATAGACGCACGAACAGGAATAGATATTATCCCACCTATACTA TATAATTGGAGGTCTGACTTTGTTCATTTGGATTACAAGGGGTTCTATACTGTAGTATTG GAAAATGATGACAGGATCATTTCTGTGGCATCCATCAGGTTACATGGTACAGTTGTGGCG GAGATGCCTCTAATAGCTACTTGCCTTGAGAATCGTCAACAAGGGATGTGCAGGCGTCTC ATGGATTACATTGAACAGATGCTGAAATCTCTGAAGGTAGAGATGCTTCTTCTATCCGCG ATACCTAGCCTAGTCGACACATGGACGATGGCGTTCGGGTTCGTACCGATAGACGACCTC GACAGGAAGAATCTCAGCAGGCTGAGGCTGGTGTCGGTCCCGGGGACCGTTCTACTGAAG AGGAACCTGTACGAGTGTCCGGGCACCAATGCGGGTGAGCTGCGAAACCCTGAACCCTTC AAAGTTTACTCACGCTCTGCCAGGAAAAACCGCGACGGTAATTCTGAACATGACATTTGC CAAATGAGATGA

Peptide Sequence

PEP ID	Os04t0433900-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:21559486:21565988:-1 gene:Os04g0433900 transcript:Os04t0433900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os04t0433900-00)
Sequence	MDAKDLVEIGMKEEDITTMLFGKKVIELTEDAFDGSKEERKIFEELFCRTGTSGASTRHP RRDGKSSSLRDASKELISTNTPSSSASNHKSARCRVVESFTYGNLSSYLVFCNNDKQKMQ KTVGFPDMASASDLVIQWTPPSVERVYTRRAVARRNQRAKLCSVLDLERVDITSVRQRRD RGQHKYGHSHAVLWDHLRLHANLLMMDAGWKIDGKERWDKSKVDHIYESPDKVMRLFSLP RAWKCFGQWLLINSSGFGGNDYGRIWFNIHDFLSDLKNTLLCLEYEVRLPKQSLSFLNQW QLLDPFMAVVCIDKKVRALKKGVALKAVNSTVTFVSCIESELSNPRNADNPLGLNHSNNF NSTHPRSRKNLLPLLQSDDLDGNSSRSKHPSTVGKRKSSQYKMDERLPIMAEIQEKSIRS TAHRIVMGLQDSTAFPGSRTSLNMKNKPSYSKSNLTQSIQDKSDPLYFPPNYSPSDLVEN AEINDPSFHAYDMIESANVDNSADSPDELLLGANLLFSHEVDEMLLDDISNEHYCTAAVS EPQAKNIDLEDGPSGPSSVVSEKDTGLKANKDVINNEQHDDGVVAESQLANTDVMDRPAG ALSFLPTMDTVLEGNEMSSEEMTKGGQLSCEGTNNAMVISEPQLLFVSPHDGTLSFMNDS MCSQEMRSCLNASNGTMGTNVQLGIQSSVYEASLIRGFLYLDNEGSPICWTVLNPEPPRQ LICSEPISKASELHGEMNMECGMLTSGPKQTSKLDSSKNNRKRSKKAANIEDKGSQKKQK VNDVPVSYCAIGQYMDHTTENPAGCLISNDKEQIGSASTEQVSLNLLPGNSNDMNQQVPI KNSDNDQARVRIGSAEKIVPEKTTKKDVKRQKASSRHKCKFDDNDLLVTAVIHKLTARYR NRFSRRLAKKSGFKRLPRCRWKSEERRDRKTFPKGARTVLGKLLEMGIVCKVNILQYRRP GSKNVLKDGNITKKGIRCRCCDMVFTMSMFKYHAGLRQEIPSLNLFLGSGKSYTLCQLQA WSIEHKARKERAKCTMPLQADENDDTCGLCGDGGELICCDNCPASYHQDCLPCQDIPDGS WYCYRCLCDICGEVINLKELRSSLPALECAQCERQYHAKCIYGKLLCNEEGGPCAWFCGR RCQQIYMNLRSRVGIPIHTIDGFSCTVLRNNGDQRVSTAADIAILAECNMKLVIALSIME ECFLPIIDARTGIDIIPPILYNWRSDFVHLDYKGFYTVVLENDDRIISVASIRLHGTVVA EMPLIATCLENRQQGMCRRLMDYIEQMLKSLKVEMLLLSAIPSLVDTWTMAFGFVPIDDL DRKNLSRLRLVSVPGTVLLKRNLYECPGTNAGELRNPEPFKVYSRSARKNRDGNSEHDIC QMR

Transcript Sequence

Transcript ID	Os04t0433900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:21559486:21565988:-1 gene:Os04g0433900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os04t0433900-00)
Sequence	ATGGATGCGAAAGACTTGGTGGAAATAGGCATGAAGGAGGAGGACATTACAACAATGCTG TTTGGAAAGAAGGTTATCGAGCTGACGGAAGACGCATTTGATGGTTCGAAAGAAGAAAGG AAGATCTTTGAGGAGCTCTTCTGCAGAACAGGCACTAGCGGAGCAAGCACCCGCCATCCA CGCCGGGATGGAAAGAGCAGTTCACTGAGAGATGCAAGCAAAGAATTGATATCAACTAAC ACACCTTCGAGCTCTGCCTCCAATCACAAGTCGGCGCGCTGCCGTGTGGTTGAGTCTTTT ACATATGGCAACTTATCAAGCTATCTTGTGTTCTGCAACAATGACAAACAAAAAATGCAG AAGACAGTGGGCTTTCCGGATATGGCCAGTGCTTCTGATCTCGTGATACAGTGGACACCG CCTTCCGTTGAGAGGGTGTACACCCGTAGGGCAGTGGCTCGCAGGAACCAAAGAGCAAAA CTTTGCAGTGTTCTTGATCTGGAGAGGGTTGACATTACCAGTGTTAGACAGCGTAGGGAC AGAGGGCAGCATAAGTATGGCCACAGCCATGCAGTGCTTTGGGATCATCTCCGTCTACAC GCTAATCTTCTGATGATGGATGCTGGGTGGAAGATTGATGGCAAGGAAAGATGGGACAAG AGTAAGGTTGATCATATTTATGAGTCACCTGACAAAGTAATGCGCCTGTTTTCTCTTCCC AGGGCATGGAAATGCTTTGGCCAGTGGTTGCTTATTAATTCATCCGGCTTTGGTGGAAAT GACTACGGTCGGATATGGTTCAACATCCATGACTTTCTGAGTGATTTGAAGAATACACTG CTATGCTTAGAATATGAAGTCCGGCTCCCGAAGCAATCTCTATCTTTTCTCAACCAGTGG CAGCTCCTTGACCCTTTCATGGCAGTAGTTTGCATTGATAAGAAGGTTAGAGCCCTGAAG AAGGGAGTAGCACTGAAAGCTGTAAACAGCACTGTTACATTTGTCAGCTGCATCGAGAGT GAGCTGTCAAATCCCCGGAATGCCGACAATCCACTTGGTCTAAACCATTCGAACAATTTT AACAGCACACATCCCAGGTCACGGAAAAATCTTCTGCCACTGCTTCAATCTGATGACCTC GATGGAAATTCTTCGCGCAGCAAACATCCTTCTACTGTTGGAAAACGTAAATCTAGCCAA TATAAAATGGATGAAAGATTGCCAATCATGGCAGAAATACAAGAAAAAAGCATCAGAAGT ACTGCTCATCGTATAGTGATGGGTCTCCAAGATTCAACAGCTTTTCCTGGTTCAAGGACT AGTTTAAATATGAAAAATAAGCCTTCATACAGCAAGTCTAATTTGACACAGAGCATTCAA GACAAATCTGATCCACTATATTTTCCACCTAATTATTCTCCCAGTGATCTTGTTGAAAAT GCTGAAATAAATGATCCGAGTTTTCATGCCTATGACATGATAGAATCTGCAAACGTGGAC AATTCTGCAGATAGTCCTGACGAGTTGCTCCTAGGAGCAAACTTACTGTTTTCTCACGAA GTGGACGAGATGCTCCTTGACGACATCAGCAATGAACATTACTGTACTGCAGCTGTTTCT GAGCCACAAGCAAAAAACATAGATTTAGAGGATGGACCGTCTGGTCCATCATCAGTAGTA TCAGAGAAGGACACAGGTTTGAAAGCTAATAAAGATGTTATCAACAATGAACAGCATGAT GATGGAGTTGTCGCTGAGTCCCAATTGGCAAATACAGATGTGATGGATAGACCTGCTGGT GCACTGTCATTTCTACCAACGATGGATACAGTTTTGGAAGGTAATGAGATGAGCTCAGAA GAGATGACAAAAGGAGGGCAGTTATCATGTGAAGGCACCAACAATGCGATGGTGATATCG GAGCCACAGTTATTGTTTGTGTCCCCTCATGATGGAACCCTTTCTTTCATGAATGATAGT ATGTGCAGCCAAGAGATGCGGAGTTGCCTCAATGCTTCAAATGGCACCATGGGGACTAAC GTGCAGCTAGGCATCCAATCCTCAGTATATGAAGCAAGTTTGATTCGGGGATTCCTATAC CTTGACAATGAGGGTTCTCCAATTTGTTGGACGGTCCTAAACCCAGAACCTCCTAGGCAG TTGATCTGTTCTGAACCAATCTCAAAGGCATCTGAACTTCATGGTGAAATGAACATGGAG TGTGGGATGTTAACTTCTGGACCGAAGCAAACGTCAAAATTAGACTCGAGCAAAAACAAT CGGAAAAGGTCCAAGAAAGCTGCAAATATTGAAGACAAAGGCAGTCAAAAGAAACAGAAG GTAAATGATGTTCCTGTAAGTTACTGCGCAATTGGTCAATATATGGACCATACAACTGAG AATCCTGCTGGCTGTTTAATTAGCAATGATAAAGAACAGATAGGTTCAGCAAGCACTGAG CAGGTTTCATTAAACTTGTTGCCTGGAAATAGCAATGACATGAATCAGCAAGTTCCCATA AAAAATAGTGACAATGATCAAGCCAGAGTACGCATTGGGTCAGCAGAAAAGATTGTGCCA GAAAAAACTACCAAAAAAGATGTCAAACGGCAAAAGGCATCATCGCGGCATAAATGCAAG TTTGACGACAATGATCTTCTGGTGACAGCTGTCATACATAAGTTAACTGCACGCTACAGG AATCGTTTTAGCCGAAGGCTCGCCAAGAAATCTGGTTTCAAACGTCTACCTAGATGTCGC TGGAAGAGTGAAGAGAGACGTGACAGGAAGACGTTTCCTAAAGGAGCAAGAACAGTGTTG GGAAAGTTGCTTGAAATGGGCATTGTTTGTAAAGTAAATATTCTTCAATATCGAAGACCA GGAAGCAAAAATGTATTAAAGGATGGAAACATTACAAAGAAGGGCATTAGATGCCGATGC TGTGATATGGTGTTTACAATGTCCATGTTTAAGTACCATGCAGGTCTGCGGCAAGAAATT CCCTCTCTGAATCTTTTCTTGGGTTCTGGCAAATCATACACTCTTTGCCAGCTTCAAGCA TGGTCTATTGAACATAAGGCCAGGAAAGAACGTGCAAAATGTACTATGCCACTCCAAGCT GATGAAAATGATGATACTTGTGGATTATGTGGTGATGGCGGTGAACTGATATGCTGCGAC AACTGTCCTGCTAGTTACCATCAGGACTGCTTGCCTTGTCAGGATATTCCAGATGGCAGC TGGTATTGCTATAGATGCCTTTGCGATATATGTGGGGAAGTGATAAATTTGAAGGAGCTC AGAAGTTCCCTGCCTGCTTTAGAATGCGCACAGTGTGAACGCCAATATCATGCAAAATGC ATATATGGTAAACTTTTGTGCAACGAGGAAGGTGGACCTTGTGCCTGGTTTTGTGGAAGA AGATGCCAGCAGATTTATATGAATTTGCGATCTCGTGTTGGGATCCCCATTCACACAATT GATGGCTTCTCTTGCACTGTTCTCCGGAACAACGGTGATCAACGGGTCTCTACAGCTGCA GATATTGCAATCCTCGCTGAGTGCAACATGAAATTAGTGATTGCCTTGAGTATAATGGAA GAATGCTTCTTACCTATAATAGACGCACGAACAGGAATAGATATTATCCCACCTATACTA TATAATTGGAGGTCTGACTTTGTTCATTTGGATTACAAGGGGTTCTATACTGTAGTATTG GAAAATGATGACAGGATCATTTCTGTGGCATCCATCAGGTTACATGGTACAGTTGTGGCG GAGATGCCTCTAATAGCTACTTGCCTTGAGAATCGTCAACAAGGGATGTGCAGGCGTCTC ATGGATTACATTGAACAGATGCTGAAATCTCTGAAGGTAGAGATGCTTCTTCTATCCGCG ATACCTAGCCTAGTCGACACATGGACGATGGCGTTCGGGTTCGTACCGATAGACGACCTC GACAGGAAGAATCTCAGCAGGCTGAGGCTGGTGTCGGTCCCGGGGACCGTTCTACTGAAG AGGAACCTGTACGAGTGTCCGGGCACCAATGCGGGTGAGCTGCGAAACCCTGAACCCTTC AAAGTTTACTCACGCTCTGCCAGGAAAAACCGCGACGGTAATTCTGAACATGACATTTGC CAAATGAGATGAATCACAGCGGGTGGTGGTGGTGGTGGTGGTGGTAGCAAGGAGAATCTC GCGTTCGTCGATCGGTCGGTGGCGGTGACGGCTGCGGATGCTGGACAGCAGAGGCCGTTT GAGGATCGCTCGCCGGTTTCTTGTGCAGTGGACAGCCTCGCCGACGAGCTGCGGAGTTTG AAGATCAATTCGTC