Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0432300-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:21447893:21449455:1 gene:Os04g0432300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 4-alpha-L-fucosyltransferase. (Os04t0432300-00)
Sequence

ATGTCGTCGCCGCCGTCCTCGGGCTCGGAGCGCTCGCTGGCGTCGCTCGTCTCCGCGGCG
GCGCACTCCGTCAAGCTCAACCGCGCCTACCTCCTCGCCCCGGCCGTCGCCGCGGGCCTC
CTCGCCGCCGTGCTCCTCTCCTCCCTCCTCGACTTCTCCGCTTTCTCCGCCTCCCCGCGG
CCGGCGTTCCCTCCGCCGACCGCGGGCGCGCCGGCGAACGCGTCGGCCCTGTCAGCGCCG
CCTCGCGCGCCCGTGCGCACGGCCCTGGACACGCTCGGGACGCGGCCGCGGGAGCCGTTC
ACGGCGCTGCGCGACGCGTACGCGCGGTGGGACGCGGCGGTGGGGTGCGCGGCCTTCGCG
GAGAAGCACCGGTCGCGGTCGTCGCCGCCGCCCGGCCCGGCGGCGCTGCAGGACCCCGAG
GCGGCGCCGTGCGGCTCGCTGCGGCTGCCCCACGTCGCGCTCGCCGTGAGGGGGGTGACG
TGGGTGCCCGACATCCTCGACGGCGTGTACCAGTGCCGGTGCGGGCTGACCTGCCTCTGG
AGCCGCAACGAGGAGGCCCTCGCCGACACCCCCGACGTCGTGCTCTACGAGATCTGGCCC
CCTCCCGACACCAGGAAGCAGGGCGAGCCGCTGCGCGCGTTCATGGACATCGAGCCGACG
AGGAAGCGGTCGGGGCACGAGGACATTTTCATCGGCTACCACGCCGACGACGACGTGCAG
GTGACCTACGCCGGCAAGTTCTTCCGCATCACCCACAACTACCACGTCGCCACCCACAAG
CGCGACGACGTGCTGGTGTACTGGTCGTCGTCGCGGTGCTTCGAGCACCGGAACAAGATC
GCGCGGGAGCTGTTCCGCCACCTCCCGGCGCACTCCTTCGGCCGGTGCGAGAACAACGTC
GGCGGCGGCGACAAGGCCCTGGAGCTGTACCCGGACTGCGCCCGCGACGGCCACGGCGCG
GCGGAGTGGTGGGACCACCTCCACTGCGCCATGTCGCACTACAAGTTCGTGCTCGCCATC
GAGAACACCATCGCCGACAGCTACTCCACGGAGAAGCTCTACTACGCGCTGGAGGCCGGG
TCGGTGCCCATCTACTTCGGCGCGCCCAACGCCCGCGACCTGGCGCCCCCGGGCTCCTAC
ATCGACGGCGCCGCGTTCGCGTCGGCGGAGGAGCTCGCGGCGTACGTGAGGGAGGTGGCC
GGCGACCCGGCGGCGTACGCCGAGTTCCACGCGTGGCGGCGGTGCGGCGTCCTGGGCGGC
TACGGCCGGAACCGGCTCGTCAGCCTCGACACGCTCCCGTGCAGGCTCTGCGAGCGCGCC
AGCCGCATGGGCGGCCGCCACGCGCCGGCGCCCAACGCCACCGTGTCGTGA

Peptide Sequence

PEP ID

Os04t0432300-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:21447893:21449455:1 gene:Os04g0432300 transcript:Os04t0432300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 4-alpha-L-fucosyltransferase. (Os04t0432300-00)
Sequence

MSSPPSSGSERSLASLVSAAAHSVKLNRAYLLAPAVAAGLLAAVLLSSLLDFSAFSASPR
PAFPPPTAGAPANASALSAPPRAPVRTALDTLGTRPREPFTALRDAYARWDAAVGCAAFA
EKHRSRSSPPPGPAALQDPEAAPCGSLRLPHVALAVRGVTWVPDILDGVYQCRCGLTCLW
SRNEEALADTPDVVLYEIWPPPDTRKQGEPLRAFMDIEPTRKRSGHEDIFIGYHADDDVQ
VTYAGKFFRITHNYHVATHKRDDVLVYWSSSRCFEHRNKIARELFRHLPAHSFGRCENNV
GGGDKALELYPDCARDGHGAAEWWDHLHCAMSHYKFVLAIENTIADSYSTEKLYYALEAG
SVPIYFGAPNARDLAPPGSYIDGAAFASAEELAAYVREVAGDPAAYAEFHAWRRCGVLGG
YGRNRLVSLDTLPCRLCERASRMGGRHAPAPNATVS

Transcript Sequence

Transcript ID

Os04t0432300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:21447893:21449455:1 gene:Os04g0432300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 4-alpha-L-fucosyltransferase. (Os04t0432300-00)
Sequence

GAGATGTCGTCGCCGCCGTCCTCGGGCTCGGAGCGCTCGCTGGCGTCGCTCGTCTCCGCG
GCGGCGCACTCCGTCAAGCTCAACCGCGCCTACCTCCTCGCCCCGGCCGTCGCCGCGGGC
CTCCTCGCCGCCGTGCTCCTCTCCTCCCTCCTCGACTTCTCCGCTTTCTCCGCCTCCCCG
CGGCCGGCGTTCCCTCCGCCGACCGCGGGCGCGCCGGCGAACGCGTCGGCCCTGTCAGCG
CCGCCTCGCGCGCCCGTGCGCACGGCCCTGGACACGCTCGGGACGCGGCCGCGGGAGCCG
TTCACGGCGCTGCGCGACGCGTACGCGCGGTGGGACGCGGCGGTGGGGTGCGCGGCCTTC
GCGGAGAAGCACCGGTCGCGGTCGTCGCCGCCGCCCGGCCCGGCGGCGCTGCAGGACCCC
GAGGCGGCGCCGTGCGGCTCGCTGCGGCTGCCCCACGTCGCGCTCGCCGTGAGGGGGGTG
ACGTGGGTGCCCGACATCCTCGACGGCGTGTACCAGTGCCGGTGCGGGCTGACCTGCCTC
TGGAGCCGCAACGAGGAGGCCCTCGCCGACACCCCCGACGTCGTGCTCTACGAGATCTGG
CCCCCTCCCGACACCAGGAAGCAGGGCGAGCCGCTGCGCGCGTTCATGGACATCGAGCCG
ACGAGGAAGCGGTCGGGGCACGAGGACATTTTCATCGGCTACCACGCCGACGACGACGTG
CAGGTGACCTACGCCGGCAAGTTCTTCCGCATCACCCACAACTACCACGTCGCCACCCAC
AAGCGCGACGACGTGCTGGTGTACTGGTCGTCGTCGCGGTGCTTCGAGCACCGGAACAAG
ATCGCGCGGGAGCTGTTCCGCCACCTCCCGGCGCACTCCTTCGGCCGGTGCGAGAACAAC
GTCGGCGGCGGCGACAAGGCCCTGGAGCTGTACCCGGACTGCGCCCGCGACGGCCACGGC
GCGGCGGAGTGGTGGGACCACCTCCACTGCGCCATGTCGCACTACAAGTTCGTGCTCGCC
ATCGAGAACACCATCGCCGACAGCTACTCCACGGAGAAGCTCTACTACGCGCTGGAGGCC
GGGTCGGTGCCCATCTACTTCGGCGCGCCCAACGCCCGCGACCTGGCGCCCCCGGGCTCC
TACATCGACGGCGCCGCGTTCGCGTCGGCGGAGGAGCTCGCGGCGTACGTGAGGGAGGTG
GCCGGCGACCCGGCGGCGTACGCCGAGTTCCACGCGTGGCGGCGGTGCGGCGTCCTGGGC
GGCTACGGCCGGAACCGGCTCGTCAGCCTCGACACGCTCCCGTGCAGGCTCTGCGAGCGC
GCCAGCCGCATGGGCGGCCGCCACGCGCCGGCGCCCAACGCCACCGTGTCGTGA