Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0431700-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:21396879:21401829:1 gene:Os04g0431700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0160I14.9 protein. (Os04t0431700-01)
Sequence	ATGATTAAAGCTAATGTAAATTGGGATACTTTTGATTGGGCTGTGCAAGGGATACTTGAA CATTTTGTTAAAAATCAGAGGGACACAAGAGTTATATATTTTGATGGCTGGCGTGGTTTT GGAGCATCAGCAGTCCTTAGAGCTGTAGCAGATGAGCTTACATCTCGAGGAGCTTGGCCA GAACTACACATTGATAAAGTAATCCAGATTGACTGCTCTACATGGAAAAGTAGAAGGGCA ATGCAGAGGGCAATTGCAGTGGAACTCAAGCTTGATGATTCGGTAATTGAAATTATTGAT AAGACAGATGAGGAGGATGATTTTAAGGGAGTGGATGAAGGCTCTAGAAGCGAGATAATG AGTGTTGCAGAAGTGATTGATCAAGTCCTCAGGGATCACAAATTTATGGTTGCTTTTCAT AATGGAAGTGGTGATTACATTGATTTAGGTAGCTTTGGGTTCCCGCAAATTACACTATTT CGTTCCAATCTAATATTATGGACCTTTCGGAAGAGGTTCCAAGGAAGGGAGCGTTACTCT GAGATAAAAGACAAAGTGAAGAACACCCATTTATTCGCATTTGAAACAGAGTATTATATA ACAAGAAACAACATTCTCTTCCCAGTACTGCAAAAAGAGGCTGCTGCCATAGCTGCCCAT TATCCTTGCATGCGGGAGATCGACCCGGAAAGGATCGTGCATTGCTGTCTATATGGACTA TTTCTCTATCTTTGTTTGCCCAAACATTTGGAGAATGAGTGGGCAGCCCGAGCATCAGTG TACTGGATGTGTGATGGCATCATACAAGGTGATCAGGCATGGGAGATAAGCGCTGCACTT TCAAAAGAAATAAAGTGGGATCTACAACCTTCTTTACAAGATGAGGTGCGTCAAGAATTC ATAGAATCATCCTCAAAAAACTCTGTAAGTATCCAGAGATTCAAAAACAGATACTTTGAT GGGCAAAAGTTTTACCCTTGGATCACAATCACTGCATCAAATAATATTAATCCAGAAACA CTACAGGACATCCGATCCAAAAATGCAGAGGCATCGTCTTATTTCTTGGCTCCTGAAAGA TCCAGTGATATCACACTAGTGTTATCTGATGGGTTGTTTGACCAATGGAACAACCTCCAA GTTCTGCAGTTGTCATATTGTGACTTCAGCTTTGCATCACCACCTTTTATTGGTTGCCAG AATCTAAGATTTATTGGGCTTGACCACTGTAAAGATAAAAAAGAAGGATGCAAACAAAGT GACCTAAGGAAGTGGCAGTTTCTCCATAGCTTATTAGTTTTGGATCTCATTGACACTATC TGGTACCAAGTATTTTCCGAAGACATGGCAGATCTTTTTGTTAACCTTAGGGAGCTAAAT ATAGTAGGAGTTTATTGCTCTCACATATGGGGCCAGCTACAAAATAAGATTGAATATGTT GATTTGTCTAGGAAAAGGAATATAAAACTTCCTTCCACTCTAAGATTCTTCAGGCTTGAT GACCGTCAACCTACACCGCAGTCCACACCGGGCATTGAATTATCGCTAAAAGGTTGCATG GGATTGGAAAGTTTATTCCTGAGTCGAATATCCAACCTCACGGAGCTGGACCTCTCCGGA ACTGCAATCAGGATACTTGACTTCACAGCTATGGTGGTGGAAGTCTCAGGTTTGAAACGA CTATTTCTGCTAGGATGCAAGCAACTCCAAGCAATAAAATGGGACAATAGTGGTTCAACG ATAAAGCCGGACCTAGAGTTGTTGTGCGTTGACACAAGGTCTAGAAGTAAATATCCTCAG TTATTTGTTGACAAGAATAAATCCCCCGGTTTCTTGTCAGTCCATGCTGTTATTGTGGAC GCGAGAATTGCTCGGTCCTTATGCGCTCTAATAGAGAACTCATATCATGTTGATATGCAT ATCCATGTCACCTCTTCGACCATATATGGTGAAGTTCAATCCGAAGGAACCTACAAAGAT AGCATTAGCCAATTAAGTGATCATGTGAACATGCAGCAACAAGACCTTATTTCAGCAGGC CAGTACCATGATGTCCAACTTAGCATGGTTGGCGATGTCCCAATGCAGTCATTCCCCCTT CCTCCGACAACAATGTTGAGCCGCCATATCGAGATTGCACAGGGGAGCCACAACCTGGAG AGCGAGCTGGATGATGATTCACCGATTCTTACTTTAGCTCATCTAGTGCAGGGGAAGGCT GAGTCACTGCATGTGCATGATCTCTCAACCATCACTCCTTTGCCCGGAGGACAATGGTGC TGTCTCAAGTGGTGTCGTATAGAGAGGTGCCCGAAGATAGAAATTGTCTTCCCTAAACAC GCATGGAATTTCTACGGTCTGGAAACCGCCTGGGTGTCGGATCTCTTGATGGCCCGTTGC ATCTGGAGTAAAGGTTCTCTCCAGTACAGTGGTTCCTTCCAAAATCTGCAGCACCTGCAC CTGCGCAGCTGCCCAAGGCTCCAGTTCGTGCTCCCGGTGTGGGCCTCCTCCTTCCCGGAC CTGAAAACCCTCCACGTCATCCACTGCAGCAACCTCCACAACATCTTCGTGCTGGACGGA GATTACCCAGAGCAAATAACCGTCGAAGGTGTAGCATTCCCGAAGCTAACCACCATCCAC CTGCACGACCTCCCGATGCTGCGGCAGATTTGCGACGTCGAGTTCAAGATGGTGGCTCCC GCGCTCGAGACCATCAAGATCAGGGGATGCTGGGGCCTGCGCCGGCTGCCGGCCGTCGCT GCGGATGGACCGAAGCCGGCCGTGGAGATCGAGAAGGACGTGTGGGACGCGCTGGAGTGG GACGGGGTGGAAGCCGACCACCACCCTTCCCTCTTCCAGGCGCCGGTGCACTCGCGCTAC TACAGGAAGAAGCTGCCCAGGGGCTCCGTCCTCAGGTGA

Peptide Sequence

PEP ID	Os04t0431700-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:21396879:21401829:1 gene:Os04g0431700 transcript:Os04t0431700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0160I14.9 protein. (Os04t0431700-01)
Sequence	MIKANVNWDTFDWAVQGILEHFVKNQRDTRVIYFDGWRGFGASAVLRAVADELTSRGAWP ELHIDKVIQIDCSTWKSRRAMQRAIAVELKLDDSVIEIIDKTDEEDDFKGVDEGSRSEIM SVAEVIDQVLRDHKFMVAFHNGSGDYIDLGSFGFPQITLFRSNLILWTFRKRFQGRERYS EIKDKVKNTHLFAFETEYYITRNNILFPVLQKEAAAIAAHYPCMREIDPERIVHCCLYGL FLYLCLPKHLENEWAARASVYWMCDGIIQGDQAWEISAALSKEIKWDLQPSLQDEVRQEF IESSSKNSVSIQRFKNRYFDGQKFYPWITITASNNINPETLQDIRSKNAEASSYFLAPER SSDITLVLSDGLFDQWNNLQVLQLSYCDFSFASPPFIGCQNLRFIGLDHCKDKKEGCKQS DLRKWQFLHSLLVLDLIDTIWYQVFSEDMADLFVNLRELNIVGVYCSHIWGQLQNKIEYV DLSRKRNIKLPSTLRFFRLDDRQPTPQSTPGIELSLKGCMGLESLFLSRISNLTELDLSG TAIRILDFTAMVVEVSGLKRLFLLGCKQLQAIKWDNSGSTIKPDLELLCVDTRSRSKYPQ LFVDKNKSPGFLSVHAVIVDARIARSLCALIENSYHVDMHIHVTSSTIYGEVQSEGTYKD SISQLSDHVNMQQQDLISAGQYHDVQLSMVGDVPMQSFPLPPTTMLSRHIEIAQGSHNLE SELDDDSPILTLAHLVQGKAESLHVHDLSTITPLPGGQWCCLKWCRIERCPKIEIVFPKH AWNFYGLETAWVSDLLMARCIWSKGSLQYSGSFQNLQHLHLRSCPRLQFVLPVWASSFPD LKTLHVIHCSNLHNIFVLDGDYPEQITVEGVAFPKLTTIHLHDLPMLRQICDVEFKMVAP ALETIKIRGCWGLRRLPAVAADGPKPAVEIEKDVWDALEWDGVEADHHPSLFQAPVHSRY YRKKLPRGSVLR

Transcript Sequence

Transcript ID	Os04t0431700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:21396879:21401829:1 gene:Os04g0431700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0160I14.9 protein. (Os04t0431700-01)
Sequence	GTGCTCGCGCTCGCGCAGAAGCCCATCTATCCAAGCATTCCAATTGCTGCTGCTTCCATC GGTCGGCCAGAATTGCTGCATGCTGTTGTCTTAAGTTATTTGGAGCATTCTTCAGTTCGT CCATCTAGCCTGACTTCATACTTGCTTCACCTGGCTCAGGGCCTCTGGCGCTCTGCTCTA TATATATACTCAGGTGGCGAGTGGAATTGATCGGTTGATACAATCTGATACGATGGGTTA GATTAATTGATTTTCTGACGATTCTCCTCTTCCTGATCACCATGATTAAAGCTAATGTAA ATTGGGATACTTTTGATTGGGCTGTGCAAGGGATACTTGAACATTTTGTTAAAAATCAGA GGGACACAAGAGTTATATATTTTGATGGCTGGCGTGGTTTTGGAGCATCAGCAGTCCTTA GAGCTGTAGCAGATGAGCTTACATCTCGAGGAGCTTGGCCAGAACTACACATTGATAAAG TAATCCAGATTGACTGCTCTACATGGAAAAGTAGAAGGGCAATGCAGAGGGCAATTGCAG TGGAACTCAAGCTTGATGATTCGGTAATTGAAATTATTGATAAGACAGATGAGGAGGATG ATTTTAAGGGAGTGGATGAAGGCTCTAGAAGCGAGATAATGAGTGTTGCAGAAGTGATTG ATCAAGTCCTCAGGGATCACAAATTTATGGTTGCTTTTCATAATGGAAGTGGTGATTACA TTGATTTAGGTAGCTTTGGGTTCCCGCAAATTACACTATTTCGTTCCAATCTAATATTAT GGACCTTTCGGAAGAGGTTCCAAGGAAGGGAGCGTTACTCTGAGATAAAAGACAAAGTGA AGAACACCCATTTATTCGCATTTGAAACAGAGTATTATATAACAAGAAACAACATTCTCT TCCCAGTACTGCAAAAAGAGGCTGCTGCCATAGCTGCCCATTATCCTTGCATGCGGGAGA TCGACCCGGAAAGGATCGTGCATTGCTGTCTATATGGACTATTTCTCTATCTTTGTTTGC CCAAACATTTGGAGAATGAGTGGGCAGCCCGAGCATCAGTGTACTGGATGTGTGATGGCA TCATACAAGGTGATCAGGCATGGGAGATAAGCGCTGCACTTTCAAAAGAAATAAAGTGGG ATCTACAACCTTCTTTACAAGATGAGGTGCGTCAAGAATTCATAGAATCATCCTCAAAAA ACTCTGTAAGTATCCAGAGATTCAAAAACAGATACTTTGATGGGCAAAAGTTTTACCCTT GGATCACAATCACTGCATCAAATAATATTAATCCAGAAACACTACAGGACATCCGATCCA AAAATGCAGAGGCATCGTCTTATTTCTTGGCTCCTGAAAGATCCAGTGATATCACACTAG TGTTATCTGATGGGTTGTTTGACCAATGGAACAACCTCCAAGTTCTGCAGTTGTCATATT GTGACTTCAGCTTTGCATCACCACCTTTTATTGGTTGCCAGAATCTAAGATTTATTGGGC TTGACCACTGTAAAGATAAAAAAGAAGGATGCAAACAAAGTGACCTAAGGAAGTGGCAGT TTCTCCATAGCTTATTAGTTTTGGATCTCATTGACACTATCTGGTACCAAGTATTTTCCG AAGACATGGCAGATCTTTTTGTTAACCTTAGGGAGCTAAATATAGTAGGAGTTTATTGCT CTCACATATGGGGCCAGCTACAAAATAAGATTGAATATGTTGATTTGTCTAGGAAAAGGA ATATAAAACTTCCTTCCACTCTAAGATTCTTCAGGCTTGATGACCGTCAACCTACACCGC AGTCCACACCGGGCATTGAATTATCGCTAAAAGGTTGCATGGGATTGGAAAGTTTATTCC TGAGTCGAATATCCAACCTCACGGAGCTGGACCTCTCCGGAACTGCAATCAGGATACTTG ACTTCACAGCTATGGTGGTGGAAGTCTCAGGTTTGAAACGACTATTTCTGCTAGGATGCA AGCAACTCCAAGCAATAAAATGGGACAATAGTGGTTCAACGATAAAGCCGGACCTAGAGT TGTTGTGCGTTGACACAAGGTCTAGAAGTAAATATCCTCAGTTATTTGTTGACAAGAATA AATCCCCCGGTTTCTTGTCAGTCCATGCTGTTATTGTGGACGCGAGAATTGCTCGGTCCT TATGCGCTCTAATAGAGAACTCATATCATGTTGATATGCATATCCATGTCACCTCTTCGA CCATATATGGTGAAGTTCAATCCGAAGGAACCTACAAAGATAGCATTAGCCAATTAAGTG ATCATGTGAACATGCAGCAACAAGACCTTATTTCAGCAGGCCAGTACCATGATGTCCAAC TTAGCATGGTTGGCGATGTCCCAATGCAGTCATTCCCCCTTCCTCCGACAACAATGTTGA GCCGCCATATCGAGATTGCACAGGGGAGCCACAACCTGGAGAGCGAGCTGGATGATGATT CACCGATTCTTACTTTAGCTCATCTAGTGCAGGGGAAGGCTGAGTCACTGCATGTGCATG ATCTCTCAACCATCACTCCTTTGCCCGGAGGACAATGGTGCTGTCTCAAGTGGTGTCGTA TAGAGAGGTGCCCGAAGATAGAAATTGTCTTCCCTAAACACGCATGGAATTTCTACGGTC TGGAAACCGCCTGGGTGTCGGATCTCTTGATGGCCCGTTGCATCTGGAGTAAAGGTTCTC TCCAGTACAGTGGTTCCTTCCAAAATCTGCAGCACCTGCACCTGCGCAGCTGCCCAAGGC TCCAGTTCGTGCTCCCGGTGTGGGCCTCCTCCTTCCCGGACCTGAAAACCCTCCACGTCA TCCACTGCAGCAACCTCCACAACATCTTCGTGCTGGACGGAGATTACCCAGAGCAAATAA CCGTCGAAGGTGTAGCATTCCCGAAGCTAACCACCATCCACCTGCACGACCTCCCGATGC TGCGGCAGATTTGCGACGTCGAGTTCAAGATGGTGGCTCCCGCGCTCGAGACCATCAAGA TCAGGGGATGCTGGGGCCTGCGCCGGCTGCCGGCCGTCGCTGCGGATGGACCGAAGCCGG CCGTGGAGATCGAGAAGGACGTGTGGGACGCGCTGGAGTGGGACGGGGTGGAAGCCGACC ACCACCCTTCCCTCTTCCAGGCGCCGGTGCACTCGCGCTACTACAGGAAGAAGCTGCCCA GGGGCTCCGTCCTCAGGTGAATTGAATCCCTGGGCTTGGGCGGCCATGATTTGGGGATTG ATTGGCGACGAATGATGGTGAATCAGTGAGATGCTTCTTGCTTGCTTCTGTTGGGTGATT TGTCTCCGGTGATGTTGCAGCAAGCTTTGTGGTGTGAGCTGTGTGACGGGCACGGACTGA CCGTGGCTCGATCTTGTCCTCGTATATGGCCGAGTTGGCCAGAGAGCGAGATTGCCATGG CTCTGAAATAATAAGCGGCTTTGTTTGTGCGTGGATGCACAGACCAGCTGATTGAGTGAG TGTGTGTTTCTTGAATTTAATTAGCATTCTGGGTGTGGATGCTCAGATGCATGTGTGTGT GTGGCTTGATATGATGATCTGCTTTGCGTTTGAAACAATAATAAGCAGTAGCCATTTGTG CCTGCGAGCATATGTATGTGGCTGCTGCAGTGTGACTGTGTGAGAGTGCATTGCTTGTGT GTAACTGAATTCTGAAGATTCTGAACAGATGAGCAGCTGGTTGTGTGTGCTTGCTTGCAT GCATGC