Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0430200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:21332222:21335533:-1 gene:Os04g0430200 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os04t0430200-01);Similar to phospholipase C. (Os04t0430200-02)
Sequence	ATGGCTGCGAAGTGGCAGGAGGCGCCGGCGCCGGGTGTGAGGGTCCTCCTGTTCGCCGTC GCGGCCGCCGCGCTGCTGCTGGTCGTGTCGGCACGGAAGGTGGGGGAGACGTGCGCGGCG GACCGGAACTGCGACGCCGGGCTGCACTGCGAGACGTGCGTGGCCGACGGCAACGTCCGC CCGCGCTGCACCCGCGTCACCCCCGTCGACCCGCAGACCAAGGCGCGGGACCTGCCGTTC AACCGGTACGCGTGGCTGACGACGCACAACTCGTTCGCGCGGCTCGGCACGCGGTCGCGG ACGGGGACGGCCATCGCCACGGCCTGGAACCAGCAGGACACCATCACCGACCAGCTCAAC AACGGCGTGCGAGGACTGATGCTGGACATGTACGACTTCCGCAACGACATCTGGCTCTGC CACTCCTTCGGCGGCGCCTGCCAGAACTTCACCGCATTCGTGCCGGCGGTGGAGGTGCTG GGCGAGATCGAGCGGTTCTTGGCACGGAACCCGTCGGAGGTGGTGACGGTGTTCGTGGAG GACTACGTGGAGTCGCCCATGGGGCTCACCCGCGTCCTCAACGCCTCCGGCCTGACAAAG TACGTGTTCCCGGCGTGGCGGATGCCCAAGAGCGGCGGCGACTGGCCGCGGCTCAGCGAC ATGGTCCGCGACAACCACCGCCTCCTCCTCTTCACCTCCAAGTCCGCCAAGGAGGCCGCA GAGGGCATCCCCTACGAGTGGCACTACGTCGTCGAAAACCAGTATGGGACGAAGGGGATG ATCAAGGGGAGGTGCCCGAACCGCGCGGAGTCGGCCGCCATGAACGACCTCTCGAGGTCG CTGGTGCTGGTGAACTACTTCAGGGACCTACCGAATTTCCCGGTGGCCTGCAAGGACAAC TCGGCGGAGCTGCTCGACATGCTCACCACCTGCCATGACCTGTCCGCGGACAGATGGGCC AATTTCATCGCCGTCGATTTCTACAAGAGAAGTGATCGAGGTGGTGCGGCTGAAGCCACG GACAGGGCCAACGGCGGACTGGTCTGTGGGTGTGGGAGCGTCTCTGCTTGCAGTGGCAAT GGTACATGCACGACCGCTCGGCACGGCGGCACGCCCAAAGGCATCTTTAACGCGACATCG GGCGCCACGGCGTTGCTGCGGCCGCCGACGGCGACGTTGCAATGGCAGCAGCTCATCATA CTGGTGCCATCTACGCTGGCTGCTCTACTCTTGAGCCTTTGA

Peptide Sequence

PEP ID	Os04t0430200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:21332222:21335533:-1 gene:Os04g0430200 transcript:Os04t0430200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os04t0430200-01);Similar to phospholipase C. (Os04t0430200-02)
Sequence	MAAKWQEAPAPGVRVLLFAVAAAALLLVVSARKVGETCAADRNCDAGLHCETCVADGNVR PRCTRVTPVDPQTKARDLPFNRYAWLTTHNSFARLGTRSRTGTAIATAWNQQDTITDQLN NGVRGLMLDMYDFRNDIWLCHSFGGACQNFTAFVPAVEVLGEIERFLARNPSEVVTVFVE DYVESPMGLTRVLNASGLTKYVFPAWRMPKSGGDWPRLSDMVRDNHRLLLFTSKSAKEAA EGIPYEWHYVVENQYGTKGMIKGRCPNRAESAAMNDLSRSLVLVNYFRDLPNFPVACKDN SAELLDMLTTCHDLSADRWANFIAVDFYKRSDRGGAAEATDRANGGLVCGCGSVSACSGN GTCTTARHGGTPKGIFNATSGATALLRPPTATLQWQQLIILVPSTLAALLLSL

Transcript Sequence

Transcript ID	Os04t0430200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:21332222:21335533:-1 gene:Os04g0430200 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLC-like phosphodiesterase, TIM beta/alpha-barrel domain domain containing protein. (Os04t0430200-01);Similar to phospholipase C. (Os04t0430200-02)
Sequence	ATCCAATACCTTGAGAGACAGGGGGGCAAATATTCCGCCACTTGCCTTGATTCTGCTTGC TGCGGCTGCTGCCCCGTTGCTTGACGTCTACAGCACTGGGAGAGCACCAACCGCGCATCA TACGCATCAAGAGCAGAGAGCGCGCAGAGGGAGAGGGGTGAGGAGGAGATGGCTGCGAAG TGGCAGGAGGCGCCGGCGCCGGGTGTGAGGGTCCTCCTGTTCGCCGTCGCGGCCGCCGCG CTGCTGCTGGTCGTGTCGGCACGGAAGGTGGGGGAGACGTGCGCGGCGGACCGGAACTGC GACGCCGGGCTGCACTGCGAGACGTGCGTGGCCGACGGCAACGTCCGCCCGCGCTGCACC CGCGTCACCCCCGTCGACCCGCAGACCAAGGCGCGGGACCTGCCGTTCAACCGGTACGCG TGGCTGACGACGCACAACTCGTTCGCGCGGCTCGGCACGCGGTCGCGGACGGGGACGGCC ATCGCCACGGCCTGGAACCAGCAGGACACCATCACCGACCAGCTCAACAACGGCGTGCGA GGACTGATGCTGGACATGTACGACTTCCGCAACGACATCTGGCTCTGCCACTCCTTCGGC GGCGCCTGCCAGAACTTCACCGCATTCGTGCCGGCGGTGGAGGTGCTGGGCGAGATCGAG CGGTTCTTGGCACGGAACCCGTCGGAGGTGGTGACGGTGTTCGTGGAGGACTACGTGGAG TCGCCCATGGGGCTCACCCGCGTCCTCAACGCCTCCGGCCTGACAAAGTACGTGTTCCCG GCGTGGCGGATGCCCAAGAGCGGCGGCGACTGGCCGCGGCTCAGCGACATGGTCCGCGAC AACCACCGCCTCCTCCTCTTCACCTCCAAGTCCGCCAAGGAGGCCGCAGAGGGCATCCCC TACGAGTGGCACTACGTCGTCGAAAACCAGTATGGGACGAAGGGGATGATCAAGGGGAGG TGCCCGAACCGCGCGGAGTCGGCCGCCATGAACGACCTCTCGAGGTCGCTGGTGCTGGTG AACTACTTCAGGGACCTACCGAATTTCCCGGTGGCCTGCAAGGACAACTCGGCGGAGCTG CTCGACATGCTCACCACCTGCCATGACCTGTCCGCGGACAGATGGGCCAATTTCATCGCC GTCGATTTCTACAAGAGAAGTGATCGAGGTGGTGCGGCTGAAGCCACGGACAGGGCCAAC GGCGGACTGGTCTGTGGGTGTGGGAGCGTCTCTGCTTGCAGTGGCAATGGTACATGCACG ACCGCTCGGCACGGCGGCACGCCCAAAGGCATCTTTAACGCGACATCGGGCGCCACGGCG TTGCTGCGGCCGCCGACGGCGACGTTGCAATGGCAGCAGCTCATCATACTGGTGCCATCT ACGCTGGCTGCTCTACTCTTGAGCCTTTGAGAGAACATGGCAGAAACACCAAGCATCACC ACCGCATCCTTTCCCCCCAAATTTTGCTGTACATAGATTGCATCTGCCTCCCAGAAACAG ATTAGATCCCGCTTTACATTGTACATCAAACATTCGCAAGAGTTTTGGATACCTGATTGG TTGGGTCTACATTGTAATCGATCAAGAATTTGTTTGTACTCATTGTACGCAAGACATGCA AGCTCCGATGAATGAGCACATCAAAAACACGTACTTCCATC