Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0429800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:21310430:21318190:1 gene:Os04g0429800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2 description:Similar to Nicotinate phosphoribosyltransferase-like protein. (Os04t0429800-01)
Sequence	ATGGCGGCGGTGGCGGGTAGCGCGAGCGCAGGCGCCAACGGTTCGGCGGCGGCGCATCGG GTGGGGGCGCCGACGAACCCCATGGCGACGGCGCTGCTCACCGATCAGTACCAGTTCTCC ATGGCCTACGCCTACTGGAAGGCCGGCAAGCACGCCGACCGAGCCGTGTTTGATCTGTAC TTCAGGAAAAATCCATTTGGTGGAGAATTCACTGTTTTTGCTGGTCTTGAAGAATGCATT AAGTTCATTGCAAATTTTAAGTTCACAGAAGATGACATTTTGTTCCTGCAATCAGTCATG CCAATGTGTGAGGATGCGTTCTTTGATTATCTCAGGAAAACCGACTGCTCTGATGTGGAA GTGTACTCCATTCCTGAGGGTTCAGTGGTTTTTCCAAAAGTTCCTTTGATGCGAGTTGAG GGTCCAGTTGCTGTGGTCCAACTACTTGAGACACCGTTTGTAAATCTTATCAATTATGCC TCTTTGGTAACAACAAATGCTGCGAGACACCGCCATGTTGCTGGAAAATCAAAAGTTTTA CTGGAATTTGGTTTGAGACGAGCACAGGGGCCTGACGGTGCAATAAGTGCTTCAAAGTAT TGTTTCATGGGAGGTTTTGATGCAACCAGTAATGTTTTGGCTGGAAATCTGTTTGGCATA CCACTTCGCGGAACACATTCTCATGCTTATGTTAGCTCATATATGAGCCTTGATGAGATC CCAGACAAGTCCCTCAAGAGCAAAGATGGTTCAAGAGTCTGCAAAGATTTTGTTAGTTTG GTAAAAGAGTGGCTTCAAAAGATTCAGTTAGCAGATTCGTTATGTGGTGTATTTGGTGAG ACAAATCAAAGTGAGCTGGCAGCATTTGCATCCTATGCATTGGCTTTTCCGACCAATTTT CTAGCTCTTGTGGACACATATGATGTTATGCGAAGTGGAATTCCAAACTTCTGTGCAGTA GCGCTAGCACTCCATGACTTAGGGTACAAGGCATCTGGTATTAGATTAGATTCTGGTGAT CTGGCCTATTTGTCTATTGAGGCCCGTAAAGTGTTCCGTACACTAGAAAAGGAGTTTAAT GTGCCCGCTTTTGGGAAGATGATAATTACTGCTAGCAATGACCTGAATGAGGAAACAATT GATGCCCTGAACAAGCAGGGCCATGAAGTTGATTCCTTTGGTATTGGAACTTATCTAGTA ACATGTTATTCCCAGGCTGCTCTTGGCTGTGTCTTTAAGCTAGTTGAGATAAACAGTAGA CCTCGTATCAAACTTTCTGAGGATGTGGCTAAAGTATCCATTCCATGCAAAAAGCGATGT TTCAGATTGTATGGAAAAGAAGGCTACCCCTTAGTAGATATCATGATGCGTGAAAGTGAA CCATCACCGAAGGCTGGAGAACGAATCCTTTGTCGTCATCCATTCCTTGAATCCAAGAGA GCATATGTTGTCCCCCAGCATGTTGAGGAGCTCCTACAATGCTACTGGCCTGGTACATCA AATAAACCTAGGGTAGAGTTACCCTCTCTAGAGGAGATCAGAGGGCGCTGCATGCAACAG CTTGAAAAACTTCGACCAGATCACATCAGGCGGTTAAATCCAACACCTTACAAGGTGAGT GTGAGTGCAAAGCTGTATGAGTTTATCCATTCCCTATGGTTGAATGAGGCCCCAGTAGGA GAGTTACAATAG

Peptide Sequence

PEP ID	Os04t0429800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:21310430:21318190:1 gene:Os04g0429800 transcript:Os04t0429800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2 description:Similar to Nicotinate phosphoribosyltransferase-like protein. (Os04t0429800-01)
Sequence	MAAVAGSASAGANGSAAAHRVGAPTNPMATALLTDQYQFSMAYAYWKAGKHADRAVFDLY FRKNPFGGEFTVFAGLEECIKFIANFKFTEDDILFLQSVMPMCEDAFFDYLRKTDCSDVE VYSIPEGSVVFPKVPLMRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRHVAGKSKVL LEFGLRRAQGPDGAISASKYCFMGGFDATSNVLAGNLFGIPLRGTHSHAYVSSYMSLDEI PDKSLKSKDGSRVCKDFVSLVKEWLQKIQLADSLCGVFGETNQSELAAFASYALAFPTNF LALVDTYDVMRSGIPNFCAVALALHDLGYKASGIRLDSGDLAYLSIEARKVFRTLEKEFN VPAFGKMIITASNDLNEETIDALNKQGHEVDSFGIGTYLVTCYSQAALGCVFKLVEINSR PRIKLSEDVAKVSIPCKKRCFRLYGKEGYPLVDIMMRESEPSPKAGERILCRHPFLESKR AYVVPQHVEELLQCYWPGTSNKPRVELPSLEEIRGRCMQQLEKLRPDHIRRLNPTPYKVS VSAKLYEFIHSLWLNEAPVGELQ

Transcript Sequence

Transcript ID	Os04t0429800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:21310430:21318190:1 gene:Os04g0429800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2 description:Similar to Nicotinate phosphoribosyltransferase-like protein. (Os04t0429800-01)
Sequence	AAATTCCAATCCGGTCCCTCGCCTCGCCTCGCGTCTCCTCCTCCTCCTCCTTCCCCTCCC CGCCTCCAATTTCTTCCTACTCCTCCCGCCTCCCCGCGAAGCTTCCCCACGCCTCAGCCG CCAATCCAGCCCTAGTGTGGCGGCGGCGGCGGCGGCTTCTAGAAGCCCTCCTCTTCCCGG ACTCCAGGATGGCGGCGGTGGCGGGTAGCGCGAGCGCAGGCGCCAACGGTTCGGCGGCGG CGCATCGGGTGGGGGCGCCGACGAACCCCATGGCGACGGCGCTGCTCACCGATCAGTACC AGTTCTCCATGGCCTACGCCTACTGGAAGGCCGGCAAGCACGCCGACCGAGCCGTGTTTG ATCTGTACTTCAGGAAAAATCCATTTGGTGGAGAATTCACTGTTTTTGCTGGTCTTGAAG AATGCATTAAGTTCATTGCAAATTTTAAGTTCACAGAAGATGACATTTTGTTCCTGCAAT CAGTCATGCCAATGTGTGAGGATGCGTTCTTTGATTATCTCAGGAAAACCGACTGCTCTG ATGTGGAAGTGTACTCCATTCCTGAGGGTTCAGTGGTTTTTCCAAAAGTTCCTTTGATGC GAGTTGAGGGTCCAGTTGCTGTGGTCCAACTACTTGAGACACCGTTTGTAAATCTTATCA ATTATGCCTCTTTGGTAACAACAAATGCTGCGAGACACCGCCATGTTGCTGGAAAATCAA AAGTTTTACTGGAATTTGGTTTGAGACGAGCACAGGGGCCTGACGGTGCAATAAGTGCTT CAAAGTATTGTTTCATGGGAGGTTTTGATGCAACCAGTAATGTTTTGGCTGGAAATCTGT TTGGCATACCACTTCGCGGAACACATTCTCATGCTTATGTTAGCTCATATATGAGCCTTG ATGAGATCCCAGACAAGTCCCTCAAGAGCAAAGATGGTTCAAGAGTCTGCAAAGATTTTG TTAGTTTGGTAAAAGAGTGGCTTCAAAAGATTCAGTTAGCAGATTCGTTATGTGGTGTAT TTGGTGAGACAAATCAAAGTGAGCTGGCAGCATTTGCATCCTATGCATTGGCTTTTCCGA CCAATTTTCTAGCTCTTGTGGACACATATGATGTTATGCGAAGTGGAATTCCAAACTTCT GTGCAGTAGCGCTAGCACTCCATGACTTAGGGTACAAGGCATCTGGTATTAGATTAGATT CTGGTGATCTGGCCTATTTGTCTATTGAGGCCCGTAAAGTGTTCCGTACACTAGAAAAGG AGTTTAATGTGCCCGCTTTTGGGAAGATGATAATTACTGCTAGCAATGACCTGAATGAGG AAACAATTGATGCCCTGAACAAGCAGGGCCATGAAGTTGATTCCTTTGGTATTGGAACTT ATCTAGTAACATGTTATTCCCAGGCTGCTCTTGGCTGTGTCTTTAAGCTAGTTGAGATAA ACAGTAGACCTCGTATCAAACTTTCTGAGGATGTGGCTAAAGTATCCATTCCATGCAAAA AGCGATGTTTCAGATTGTATGGAAAAGAAGGCTACCCCTTAGTAGATATCATGATGCGTG AAAGTGAACCATCACCGAAGGCTGGAGAACGAATCCTTTGTCGTCATCCATTCCTTGAAT CCAAGAGAGCATATGTTGTCCCCCAGCATGTTGAGGAGCTCCTACAATGCTACTGGCCTG GTACATCAAATAAACCTAGGGTAGAGTTACCCTCTCTAGAGGAGATCAGAGGGCGCTGCA TGCAACAGCTTGAAAAACTTCGACCAGATCACATCAGGCGGTTAAATCCAACACCTTACA AGGTGAGTGTGAGTGCAAAGCTGTATGAGTTTATCCATTCCCTATGGTTGAATGAGGCCC CAGTAGGAGAGTTACAATAGATTTCTACAGAAGTTGGGAAAAACAGAGAAGCGTATTCTT TGAAGCATAGCAAAATAGCAATACATCAAAGAAAAGTAGAGCTCTGTTGTAAAAAAATAA AAAAAATCGTCAGTTCATGGGCCCAACCTTATAGGATTTTTGCTCCCCAATTTTTATTAG TACAAACTAGTTATCAGTATAGAGATAGGCCAACCTATCTGACTGTACATCCATGATCCA TTGTACTATACGTCGTTATGGAATTGAACATCCTTTTTGGAGATTTGAGTCCATGAGATG ATGAGAACAAATAATCGCTGTAAAAGGTTGAGATCATGCCCCCCTTTGTCCTTCC