Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0429400-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:21276704:21279864:1 gene:Os04g0429400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 144, endosperm-specific gene 65 description:Helix-loop-helix DNA-binding domain containing protein. (Os04t0429400-01)
Sequence	ATGTCTCAAGAAGGAGCCGACCTCTCTCAAGATGTCGATGAAAGCCCATATCACACCGCC GTTGTCACCACCAATAATCTGGTAAGGTCGATTAAAGCAGAGAAATCTAACTCTAGCTCT AGCTCCGGCAAGCCTGTCGAGACAGACATCGGTTTAAAGGTAGCAAGCCCTACTATGTTT GGGTTCAACACAAAGATAGAGGGAACGGGAAAGAACATGGCCGTCAAGAGAGAGGAAGGA GAAGGTGGTGGTCGTCCTGGCGTCAGCAGTGGTGTCAGCACACGGGATACCAACGGAAAA GGCAAGAACGCTATGGACATGGAGCACGCGTTGCATATTTGGACGGAGAGAGAGCGGAGG AAGAAGATGAAGAACATGTTCAGCACCCTACATGGCCTCCTCCCCAAGATCCCAGGCAAG ACTGACAAGGCCTCCATTGTTGGGGAGGCCATTGGCTACATCAAGACGTTGGAGGACGTC GTCCAGAAGCTGGAGACCATCAAGACGGAGCGCGTGCGCGCGCACCAGTGGGCGGCGGCG GCGGCAGCCGCCGTGGCAGCCAACGGCGGCGGCGAGGGGTCCTCTCACTCTCACTCTCAG CCGCCGCGCCACGCCACCGCCGTCACAGTCGCCGTCGCCGAGCCTGCGCCGGTGGCGGCG GCGGTGAACGCGCAGGCGCCGCAGAAGAAGGCGGCGGCGGCGGCGGCGCCGACGCTGCAG ACGTGGTCGGCGCCGAACATCACGCTGACGATGGCCGGCGTGGACGCGTTCATCAACATG TGCCTCCCGCGGCAGAGGGCGTCCTTCACCACGGTGGCGTTCGTCCTGGAGAAGCACCAG ATCGACGTCGTCACCTCCACCATCTCCGCCGACCATGACAAGAGCTTGTTCAGCGTCCAT GTCCGCCTCAACGAAGCATCCCTTCAGAGCACAGAGGGTCTGACGCCTGAAGCCAAATAC AAGCTCGCAGTGTCAGAGTTGATGGTCAGGCTCGCCGAATGA

Peptide Sequence

PEP ID	Os04t0429400-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:21276704:21279864:1 gene:Os04g0429400 transcript:Os04t0429400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 144, endosperm-specific gene 65 description:Helix-loop-helix DNA-binding domain containing protein. (Os04t0429400-01)
Sequence	MSQEGADLSQDVDESPYHTAVVTTNNLVRSIKAEKSNSSSSSGKPVETDIGLKVASPTMF GFNTKIEGTGKNMAVKREEGEGGGRPGVSSGVSTRDTNGKGKNAMDMEHALHIWTERERR KKMKNMFSTLHGLLPKIPGKTDKASIVGEAIGYIKTLEDVVQKLETIKTERVRAHQWAAA AAAAVAANGGGEGSSHSHSQPPRHATAVTVAVAEPAPVAAAVNAQAPQKKAAAAAAPTLQ TWSAPNITLTMAGVDAFINMCLPRQRASFTTVAFVLEKHQIDVVTSTISADHDKSLFSVH VRLNEASLQSTEGLTPEAKYKLAVSELMVRLAE

Transcript Sequence

Transcript ID	Os04t0429400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:21276704:21279864:1 gene:Os04g0429400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 144, endosperm-specific gene 65 description:Helix-loop-helix DNA-binding domain containing protein. (Os04t0429400-01)
Sequence	TCCCCATAGCTTGCCCTCCTCCCCAATTCCCAATCTCTATTCCTATCTTGTTGCTCTCTT CCTCCTCTAGTCCCAACACCTCCACCTCCCCATACACCCCATGTCTCAAGAAGGAGCCGA CCTCTCTCAAGATGTCGATGAAAGCCCATATCACACCGCCGTTGTCACCACCAATAATCT GGTAAGGTCGATTAAAGCAGAGAAATCTAACTCTAGCTCTAGCTCCGGCAAGCCTGTCGA GACAGACATCGGTTTAAAGGTAGCAAGCCCTACTATGTTTGGGTTCAACACAAAGATAGA GGGAACGGGAAAGAACATGGCCGTCAAGAGAGAGGAAGGAGAAGGTGGTGGTCGTCCTGG CGTCAGCAGTGGTGTCAGCACACGGGATACCAACGGAAAAGGCAAGAACGCTATGGACAT GGAGCACGCGTTGCATATTTGGACGGAGAGAGAGCGGAGGAAGAAGATGAAGAACATGTT CAGCACCCTACATGGCCTCCTCCCCAAGATCCCAGGCAAGACTGACAAGGCCTCCATTGT TGGGGAGGCCATTGGCTACATCAAGACGTTGGAGGACGTCGTCCAGAAGCTGGAGACCAT CAAGACGGAGCGCGTGCGCGCGCACCAGTGGGCGGCGGCGGCGGCAGCCGCCGTGGCAGC CAACGGCGGCGGCGAGGGGTCCTCTCACTCTCACTCTCAGCCGCCGCGCCACGCCACCGC CGTCACAGTCGCCGTCGCCGAGCCTGCGCCGGTGGCGGCGGCGGTGAACGCGCAGGCGCC GCAGAAGAAGGCGGCGGCGGCGGCGGCGCCGACGCTGCAGACGTGGTCGGCGCCGAACAT CACGCTGACGATGGCCGGCGTGGACGCGTTCATCAACATGTGCCTCCCGCGGCAGAGGGC GTCCTTCACCACGGTGGCGTTCGTCCTGGAGAAGCACCAGATCGACGTCGTCACCTCCAC CATCTCCGCCGACCATGACAAGAGCTTGTTCAGCGTCCATGTCCGCCTCAACGAAGCATC CCTTCAGAGCACAGAGGGTCTGACGCCTGAAGCCAAATACAAGCTCGCAGTGTCAGAGTT GATGGTCAGGCTCGCCGAATGAGACGAATTTGATCGTCCTGAATTTGCTGTCCCCCTTGC TACTCTCATCGAGGATTCGTACTCTCAGCATTTGGAATAACTAAAACCAGTCTTTGCTTT CAGTTTAGTCGTTGAACTTGTTACTTTTTGGATAATTCGGTTAAAGTTTCCGAACATAAG TACACCACCAGGAGGTAAAAGTGTAAAATCCGTTGATGTTGTCGTCGTCGTTGTTGGAGT TATAGACATGTTACTTGAATAATATAGTGTTGTTTCTTGAT