Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0422000-02
CDS Infomation	cds chromosome:IRGSP-1.0:4:20873467:20876244:1 gene:Os04g0422000 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAP fibrillin family protein. (Os04t0422000-01);PAP fibrillin family protein. (Os04t0422000-02);Similar to H0525E10.12 protein. (Os04t0422000-03)
Sequence	ATGGCGGCAGCTTCCGTCCTCCTCCTCCTCCCTTCCCCCTTCCTCCGTCCGTCGTCCCCG GCGCACCGCGCGCGCTGCGGCATTGCCACCACGACGACGACGAGCACGAGCGGGAGGAGG GGGCTCTTCCTCTTCGCCTCGCGCTGCCGCCCCGGCCCACGGCGACGCGCGGCGTCGGCG GCGGTGCCTCCCGAGCACGGCTTGTCCCAGCCCCAGCCACAGGCGCGGGCGGTGGGCTCG TACGAGGCCGCCCTCGGCGACGCCAAGGACGCGCTCTACGCCGCTCTGGAAGGCATGAAC AGAGGGATATTCGGGATGACCTCCGAGAAAAGGTCGGAGATTCACGCACTGGTGGAGCTC CTCGAGTCCAAGAACCCAACGCCGGAGCCAACCGACAAGCTGCAGGACAAGGTGGATGGA TGCTGGAGGCTCGTCTATAGCACGATTTCGATACTGGGGAAGAAGAGGACAAAGTTGGGA CTGAGAGATTTCATCAGCTTAGGAGATTTCTTCCAGATGATTGATGTCAAAGAGGAAAAG GCGGTAAATGTGATAAAATTCAGTGCAAGGGCGTTGAAGATATTATCTGGCCAACTTACT ATTGAAGCTTCGTACAAGATAACTACTAAAACAAAGGTTGATATCACGCTTGATAGTTCG ACCATCACTCCTGATCAGCTGATGAATATTTTCCAGAAGAACTATGATATGCTCCTTGCT ATATTCAACCCAGAAGGCTGGCTAGAGATAACATACGTTGATGAATCTCTACGGATAGGA AGAGATGACAAGGCAAACATCTTTGTGCTGGAGAGGGCAGACCCCTCAGAAGTTTGA

Peptide Sequence

PEP ID	Os04t0422000-02
PEP Infomation	pep chromosome:IRGSP-1.0:4:20873467:20876244:1 gene:Os04g0422000 transcript:Os04t0422000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAP fibrillin family protein. (Os04t0422000-01);PAP fibrillin family protein. (Os04t0422000-02);Similar to H0525E10.12 protein. (Os04t0422000-03)
Sequence	MAAASVLLLLPSPFLRPSSPAHRARCGIATTTTTSTSGRRGLFLFASRCRPGPRRRAASA AVPPEHGLSQPQPQARAVGSYEAALGDAKDALYAALEGMNRGIFGMTSEKRSEIHALVEL LESKNPTPEPTDKLQDKVDGCWRLVYSTISILGKKRTKLGLRDFISLGDFFQMIDVKEEK AVNVIKFSARALKILSGQLTIEASYKITTKTKVDITLDSSTITPDQLMNIFQKNYDMLLA IFNPEGWLEITYVDESLRIGRDDKANIFVLERADPSEV

Transcript Sequence

Transcript ID	Os04t0422000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:20873467:20876244:1 gene:Os04g0422000 gene_biotype:protein_coding transcript_biotype:protein_coding description:PAP fibrillin family protein. (Os04t0422000-01);PAP fibrillin family protein. (Os04t0422000-02);Similar to H0525E10.12 protein. (Os04t0422000-03)
Sequence	ACCCACTTATCACGAGGCTAACCCGCATGGGCGCGCGCCAAGGAGGCGGGAGGAGTAGCA CACCGCCACCATCACCAGCAGCAGCATGGTGCAGCTGAGCCGCCGCCGGCACCGCGAGCA CGCTCCATAGCCCTCTGCCATGGCGGCAGCTTCCGTCCTCCTCCTCCTCCCTTCCCCCTT CCTCCGTCCGTCGTCCCCGGCGCACCGCGCGCGCTGCGGCATTGCCACCACGACGACGAC GAGCACGAGCGGGAGGAGGGGGCTCTTCCTCTTCGCCTCGCGCTGCCGCCCCGGCCCACG GCGACGCGCGGCGTCGGCGGCGGTGCCTCCCGAGCACGGCTTGTCCCAGCCCCAGCCACA GGCGCGGGCGGTGGGCTCGTACGAGGCCGCCCTCGGCGACGCCAAGGACGCGCTCTACGC CGCTCTGGAAGGCATGAACAGAGGGATATTCGGGATGACCTCCGAGAAAAGGTCGGAGAT TCACGCACTGGTGGAGCTCCTCGAGTCCAAGAACCCAACGCCGGAGCCAACCGACAAGCT GCAGGACAAGGTGGATGGATGCTGGAGGCTCGTCTATAGCACGATTTCGATACTGGGGAA GAAGAGGACAAAGTTGGGACTGAGAGATTTCATCAGCTTAGGAGATTTCTTCCAGATGAT TGATGTCAAAGAGGAAAAGGCGGTAAATGTGATAAAATTCAGTGCAAGGGCGTTGAAGAT ATTATCTGGCCAACTTACTATTGAAGCTTCGTACAAGATAACTACTAAAACAAAGGTTGA TATCACGCTTGATAGTTCGACCATCACTCCTGATCAGCTGATGAATATTTTCCAGAAGAA CTATGATATGCTCCTTGCTATATTCAACCCAGAAGGCTGGCTAGAGATAACATACGTTGA TGAATCTCTACGGATAGGAAGAGATGACAAGGCAAACATCTTTGTGCTGGAGAGGGCAGA CCCCTCAGAAGTTTGACAAGATTTATCTGAAGCAAAATGCCTGCATATACATGGACATTC CGGCAAAGATGCCTTTGCACATACCCGTCCTGTAACACGGTGGTTTTTAACAGCCAGTGC AGATCGTGTGCTCAACTTTCCATTTGCGTTAGATTATACTACTGCTATTTTTTTTTCTTT CTGGAGCAAAAGGCATTTCCCTTTGCGACAAAATCATGCAAGCTGGGAAAGCTCATGCAA GTTCAGTTACACTACATAGAGAATTGGTACATTAAGAACTGGTGTACTTTTGAATTTTGA AATACACCATTTTCAATTATTCATCCTTGTAAGACATAATCTAATGAGTGTACAGCTTGG CAAATGGCAATACCCTTTAGAC