Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0421900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:20862593:20872470:1 gene:Os04g0421900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EXOCYST COMPLEX COMPONENT SEC5 description:Similar to H0525E10.11 protein. (Os04t0421900-01)
Sequence	ATGGCGAGCGACAGCGACGTCGACGAGGACGAGCTCCTCCAGATGGCGCTGCAGGAGCAG GCGGCGCGTGACCTCAGCCACCAGCGCCCCGCGGGGGCCGGGAAGCCCGTCGTCAACCTC GTCCGCCCCCCTGCCAACTCCTCCCGCGGCGGCGGCGGAGGAGGACGCGGCGGAGGGGGC CCCGCCAAGGCGAGGCAGCCCAGCCGCGGAGGCGGCGACGACGACGACGACGACTCCGAG GTCGAGATGCTGTCCATTTCCTCCGGGGATGAGGATGGCGCCCCCTCCTCCCGTGACCGT GGCCCCCCGCCCCCCCGCGGCGGCGGCCGCGCCGGGGCACGGCGGGCCGCGTCGAGGGAT GATGGGGATTTCGACGACGACGAGCCCAGGAGCTGGAAGCGCGTCGACGAGGCCGAGCTT GCTCGCAGGGTTCGGGAAATGCGTGAAGGGGGGGCAGCTCCTACAGTTGATCAGAAAGCA GCTGCTGCAGCAACTCGGAAGGCACTTACCAATGTACAGACTTTACCTAGAGGAGTAGAA GTTCTGGACCCTTTGGGCCTTGGAGTCATTGATAATAAGTCTCTGCGATTAATTACTGAT GCTTCAGTAAGTTCTCCTGTTTCAAGGGAGAAGGCTCAGGGTTTAGACCCCAGTATGCGA GAGAAAGTTATATATTCTTCTCCGAATTTTGACCCCAAGGTTTTTCTTTCGTGGGTTCAC AAAGATACAAGTGCTGCTGACTTAGAGTCTGGTGCGCTTACCTTGAAAACTGATCTCAAA GGGAGAACACAGCAGAAAAAACAATTAGTCAAGGAGAACTTTGATTGTTTTGTTTCGTGC AAAACCACGATAGATGATATTGAGTCAAAGCTGAGACAGATAGAGGAAGATCCCGAAGGT GCAGGAACTGCTCACTTGTACTCAGTCACCCAGAAAATTAGTGGTGTAGCAAACCGTGCA TTTGAGCCTCTATTTGAGAGGCAGGCCCAAGCTGAGAAGATCAGATCTGTTCAAGGAATG CTTCAGAGATTCCGGACATTATTTAACCTGCCAAGTGCAATTCGTGGGAACATTAGAAAA GGAGAATATGACCTAGCTGTCAGGGAGTACCAGAAAGCTAAATCTATTGTTCTTCCTTCT CATGTGGGGATACTAAAACGTGTACTTGAGGAAGTGGAAAAGGTAATGCAGGAATTCAGA GGCATGCTTTACAAGTCAATGGAGGATCCTCATCTTGACCTCGCTGAGCTTGAGAACATT GTTCGGCTACTGTTGGAGTTGGAACCTGAGACCGATCCAGTGTGGCATTATCTTAACATT CAGAATAGCAGGATCCATGGATTGTTTGAAAAATGCACCTTAGATCATGAAGCACGAATG GAGGTTCTACAGAATAAAATTCGTGAGAAAATACTATCTGATGCAAAATGGAGGCAATTG CAACAAGATTCAAATAAATCATTGGAAGTTGATTCTGCTACCGGTGACTCTTTTCAAGAT GATCAACTGTCAACAAATATTATGGCTGATGAAGCTGATAGCTTAAGGGCAGCCTACATT CGTAGGTTAACTGCTGTACTTATCCAGCATGTTCCTGCATTCTGGAGATTAGCTTTATCT GTCTTCAGTGGAAAATTTGCAAAGGCAGCTGCGGGGAATGTACTTTCTGATTCTGATATG AATACAAAACAGAGTGTAAATAAGACTGATGATAAAGGTGGAGAAGCAAAGTACACAAAC CATACTCTTGATGAAGTTGCTAGTATGGTTCGTGCTACTGTATCTGCTTTTGACACCAAG GTTCAGAATACTTTCCGTGATTTTGAGGAATGTAACATTCTTCGTCCGTTCATGGGTGAT ACTATAAAAGAAATAGCTAAGGCTTGCCTTACTCTTGAAGGGAAGGATTCATCTCCAACT GCTGTGAAAATGTTGCGGGCCCTTCATTATGAAATAACGAAGCTTTACATTCTACGACTT TGTTCATGGATGCGGGCAACAACTAAGGAGATATCGAAATATGAGACCTGGTTTACTTTA ACCACCCTTGAGAGGAACAAATCTCTATATGCAATTTCAAGCATGCCCTTGGAGTTCCGT GATATCATAGTTTCGGCAATGGACCGCATTGATTTTATGGTTCTTAATCTGAGGAGTGAG ACTGCCAAGTCTTACGATATTTCTCAACACCTCCATGAAATTCATGAATCTGTCAGACTT GCATTTCTAAATTCTTTTCTGGATTTTGCTGGTTATCTGGAGAGGTTTGGAGGGGAACTA GCTCAGAACAGATCAAATAAAGAAAACAACCATACCCAAAATGGATATGTAAATGGTACT AACAGTGAAACATCTGCTGGCATGGATGGGGACTTGTACAAGAAGCTGTTGGTTGTTCTG AGTAACATTGGATATTGTAAAGCTGAACTTTCAGATGAACTGTATACCAAATACAGGCAC ATTTGGTCCCCAGTCAGGGATAATGATGAGCGTAGTGCTGACATGCGAGATCTGATGACT TCTTTCTCAGCACTTGAGGAGAAAGTCCTGGAACAGTATACATTTGCAAAGTCGAACTTG ATCAGAAATGCTGCACGAAACTATCTGTTGGATTATGGGATTCACTGGGGAGCAGCACCA GCAGTAAAGGGCATTCGAGATGCAGCTCTTGATTTACTGCACATCCTTGTAGCTGTACAC GCAGAGGTCTACTCCGGTGCTAGGCCTCTGCTGGAAAAGGCGATGACAATTTTGGTAGAG GGTTTGATTGATATCTTCCTCAGTATTTTCCATGAGAATAAGACCAAAGAACTCAGAATG TTGGACGCAAATGGTTTTTGTCAGCTCATGCTTGAGCTTGAGTATTTTGAGACTATATTA CGGACATACTTATCAACTGAGGCAGAGCAGGCTTTGAGATCCTTACAAGAGAATTTATTG GAGAAGGCCTGCGAAAGTGTGACTGAAGCCTTGGAGAATCCTGGACACCACCGTCGACCA ACTCGTGGCAGTGAGGATGCTGCATCAGATGATAGACAATCAGTATCACCTGATGATCTG CTTGCACTTGCTCAGCAATGCAGTAGCGATTTGCTTCAAGGGGAGCTGGAGAAAACCCGG TTAAATATTGCGTGCTTTATGGAGTCAACTCTTCAATCAACGCCTGCACCGGCTGGATCA AAACCTGCTGCTTATCAGTCATACAAGGCACCTGCGACACACCAACCAGTTCAAGTGTCC TCCCCAAGTTTTAGAAGGCAGCAGACAAGTACAAATTCACCTGCAGCCTCGAGGCGGCGT CGATGA

Peptide Sequence

PEP ID	Os04t0421900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:20862593:20872470:1 gene:Os04g0421900 transcript:Os04t0421900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EXOCYST COMPLEX COMPONENT SEC5 description:Similar to H0525E10.11 protein. (Os04t0421900-01)
Sequence	MASDSDVDEDELLQMALQEQAARDLSHQRPAGAGKPVVNLVRPPANSSRGGGGGGRGGGG PAKARQPSRGGGDDDDDDSEVEMLSISSGDEDGAPSSRDRGPPPPRGGGRAGARRAASRD DGDFDDDEPRSWKRVDEAELARRVREMREGGAAPTVDQKAAAAATRKALTNVQTLPRGVE VLDPLGLGVIDNKSLRLITDASVSSPVSREKAQGLDPSMREKVIYSSPNFDPKVFLSWVH KDTSAADLESGALTLKTDLKGRTQQKKQLVKENFDCFVSCKTTIDDIESKLRQIEEDPEG AGTAHLYSVTQKISGVANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSAIRGNIRK GEYDLAVREYQKAKSIVLPSHVGILKRVLEEVEKVMQEFRGMLYKSMEDPHLDLAELENI VRLLLELEPETDPVWHYLNIQNSRIHGLFEKCTLDHEARMEVLQNKIREKILSDAKWRQL QQDSNKSLEVDSATGDSFQDDQLSTNIMADEADSLRAAYIRRLTAVLIQHVPAFWRLALS VFSGKFAKAAAGNVLSDSDMNTKQSVNKTDDKGGEAKYTNHTLDEVASMVRATVSAFDTK VQNTFRDFEECNILRPFMGDTIKEIAKACLTLEGKDSSPTAVKMLRALHYEITKLYILRL CSWMRATTKEISKYETWFTLTTLERNKSLYAISSMPLEFRDIIVSAMDRIDFMVLNLRSE TAKSYDISQHLHEIHESVRLAFLNSFLDFAGYLERFGGELAQNRSNKENNHTQNGYVNGT NSETSAGMDGDLYKKLLVVLSNIGYCKAELSDELYTKYRHIWSPVRDNDERSADMRDLMT SFSALEEKVLEQYTFAKSNLIRNAARNYLLDYGIHWGAAPAVKGIRDAALDLLHILVAVH AEVYSGARPLLEKAMTILVEGLIDIFLSIFHENKTKELRMLDANGFCQLMLELEYFETIL RTYLSTEAEQALRSLQENLLEKACESVTEALENPGHHRRPTRGSEDAASDDRQSVSPDDL LALAQQCSSDLLQGELEKTRLNIACFMESTLQSTPAPAGSKPAAYQSYKAPATHQPVQVS SPSFRRQQTSTNSPAASRRRR

Transcript Sequence

Transcript ID	Os04t0421900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:20862593:20872470:1 gene:Os04g0421900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EXOCYST COMPLEX COMPONENT SEC5 description:Similar to H0525E10.11 protein. (Os04t0421900-01)
Sequence	AGCGAAATCTCTCCTCCTCCACCTCCTCGCCTCTCTCTCCCTCTCTCTCCCCTCTCATCA CTCTCTCCCCACCCCCCTCGTCGCCTCGTCCCAGATCCGGACATGGCGAGCGACAGCGAC GTCGACGAGGACGAGCTCCTCCAGATGGCGCTGCAGGAGCAGGCGGCGCGTGACCTCAGC CACCAGCGCCCCGCGGGGGCCGGGAAGCCCGTCGTCAACCTCGTCCGCCCCCCTGCCAAC TCCTCCCGCGGCGGCGGCGGAGGAGGACGCGGCGGAGGGGGCCCCGCCAAGGCGAGGCAG CCCAGCCGCGGAGGCGGCGACGACGACGACGACGACTCCGAGGTCGAGATGCTGTCCATT TCCTCCGGGGATGAGGATGGCGCCCCCTCCTCCCGTGACCGTGGCCCCCCGCCCCCCCGC GGCGGCGGCCGCGCCGGGGCACGGCGGGCCGCGTCGAGGGATGATGGGGATTTCGACGAC GACGAGCCCAGGAGCTGGAAGCGCGTCGACGAGGCCGAGCTTGCTCGCAGGGTTCGGGAA ATGCGTGAAGGGGGGGCAGCTCCTACAGTTGATCAGAAAGCAGCTGCTGCAGCAACTCGG AAGGCACTTACCAATGTACAGACTTTACCTAGAGGAGTAGAAGTTCTGGACCCTTTGGGC CTTGGAGTCATTGATAATAAGTCTCTGCGATTAATTACTGATGCTTCAGTAAGTTCTCCT GTTTCAAGGGAGAAGGCTCAGGGTTTAGACCCCAGTATGCGAGAGAAAGTTATATATTCT TCTCCGAATTTTGACCCCAAGGTTTTTCTTTCGTGGGTTCACAAAGATACAAGTGCTGCT GACTTAGAGTCTGGTGCGCTTACCTTGAAAACTGATCTCAAAGGGAGAACACAGCAGAAA AAACAATTAGTCAAGGAGAACTTTGATTGTTTTGTTTCGTGCAAAACCACGATAGATGAT ATTGAGTCAAAGCTGAGACAGATAGAGGAAGATCCCGAAGGTGCAGGAACTGCTCACTTG TACTCAGTCACCCAGAAAATTAGTGGTGTAGCAAACCGTGCATTTGAGCCTCTATTTGAG AGGCAGGCCCAAGCTGAGAAGATCAGATCTGTTCAAGGAATGCTTCAGAGATTCCGGACA TTATTTAACCTGCCAAGTGCAATTCGTGGGAACATTAGAAAAGGAGAATATGACCTAGCT GTCAGGGAGTACCAGAAAGCTAAATCTATTGTTCTTCCTTCTCATGTGGGGATACTAAAA CGTGTACTTGAGGAAGTGGAAAAGGTAATGCAGGAATTCAGAGGCATGCTTTACAAGTCA ATGGAGGATCCTCATCTTGACCTCGCTGAGCTTGAGAACATTGTTCGGCTACTGTTGGAG TTGGAACCTGAGACCGATCCAGTGTGGCATTATCTTAACATTCAGAATAGCAGGATCCAT GGATTGTTTGAAAAATGCACCTTAGATCATGAAGCACGAATGGAGGTTCTACAGAATAAA ATTCGTGAGAAAATACTATCTGATGCAAAATGGAGGCAATTGCAACAAGATTCAAATAAA TCATTGGAAGTTGATTCTGCTACCGGTGACTCTTTTCAAGATGATCAACTGTCAACAAAT ATTATGGCTGATGAAGCTGATAGCTTAAGGGCAGCCTACATTCGTAGGTTAACTGCTGTA CTTATCCAGCATGTTCCTGCATTCTGGAGATTAGCTTTATCTGTCTTCAGTGGAAAATTT GCAAAGGCAGCTGCGGGGAATGTACTTTCTGATTCTGATATGAATACAAAACAGAGTGTA AATAAGACTGATGATAAAGGTGGAGAAGCAAAGTACACAAACCATACTCTTGATGAAGTT GCTAGTATGGTTCGTGCTACTGTATCTGCTTTTGACACCAAGGTTCAGAATACTTTCCGT GATTTTGAGGAATGTAACATTCTTCGTCCGTTCATGGGTGATACTATAAAAGAAATAGCT AAGGCTTGCCTTACTCTTGAAGGGAAGGATTCATCTCCAACTGCTGTGAAAATGTTGCGG GCCCTTCATTATGAAATAACGAAGCTTTACATTCTACGACTTTGTTCATGGATGCGGGCA ACAACTAAGGAGATATCGAAATATGAGACCTGGTTTACTTTAACCACCCTTGAGAGGAAC AAATCTCTATATGCAATTTCAAGCATGCCCTTGGAGTTCCGTGATATCATAGTTTCGGCA ATGGACCGCATTGATTTTATGGTTCTTAATCTGAGGAGTGAGACTGCCAAGTCTTACGAT ATTTCTCAACACCTCCATGAAATTCATGAATCTGTCAGACTTGCATTTCTAAATTCTTTT CTGGATTTTGCTGGTTATCTGGAGAGGTTTGGAGGGGAACTAGCTCAGAACAGATCAAAT AAAGAAAACAACCATACCCAAAATGGATATGTAAATGGTACTAACAGTGAAACATCTGCT GGCATGGATGGGGACTTGTACAAGAAGCTGTTGGTTGTTCTGAGTAACATTGGATATTGT AAAGCTGAACTTTCAGATGAACTGTATACCAAATACAGGCACATTTGGTCCCCAGTCAGG GATAATGATGAGCGTAGTGCTGACATGCGAGATCTGATGACTTCTTTCTCAGCACTTGAG GAGAAAGTCCTGGAACAGTATACATTTGCAAAGTCGAACTTGATCAGAAATGCTGCACGA AACTATCTGTTGGATTATGGGATTCACTGGGGAGCAGCACCAGCAGTAAAGGGCATTCGA GATGCAGCTCTTGATTTACTGCACATCCTTGTAGCTGTACACGCAGAGGTCTACTCCGGT GCTAGGCCTCTGCTGGAAAAGGCGATGACAATTTTGGTAGAGGGTTTGATTGATATCTTC CTCAGTATTTTCCATGAGAATAAGACCAAAGAACTCAGAATGTTGGACGCAAATGGTTTT TGTCAGCTCATGCTTGAGCTTGAGTATTTTGAGACTATATTACGGACATACTTATCAACT GAGGCAGAGCAGGCTTTGAGATCCTTACAAGAGAATTTATTGGAGAAGGCCTGCGAAAGT GTGACTGAAGCCTTGGAGAATCCTGGACACCACCGTCGACCAACTCGTGGCAGTGAGGAT GCTGCATCAGATGATAGACAATCAGTATCACCTGATGATCTGCTTGCACTTGCTCAGCAA TGCAGTAGCGATTTGCTTCAAGGGGAGCTGGAGAAAACCCGGTTAAATATTGCGTGCTTT ATGGAGTCAACTCTTCAATCAACGCCTGCACCGGCTGGATCAAAACCTGCTGCTTATCAG TCATACAAGGCACCTGCGACACACCAACCAGTTCAAGTGTCCTCCCCAAGTTTTAGAAGG CAGCAGACAAGTACAAATTCACCTGCAGCCTCGAGGCGGCGTCGATGAAGAAAATGCATC ATGTTGAGAGAACCATTCCTTCATCTACGTGCCTCTTCCCTAAATTCTCCTCTTTCTTTG TTCATCTTTCCCATGCTTTCGTTTGTTACCTGTAATTAGTATCATGTTGTCATGTATTAT GAATTTTGACCCATTCTTTTGGTGTTGTAAGATAAAAGGGGTGTACAGGGGTTGCTGTAC GGGGCTATCTACTTGTATAATTTCCATGAGCCTGGAATTATTGTCGCCATTTTTTCTAAA GACACCATCTCAACTTAACTTTCTGGAACTGAGTGTCAGATTTGTCGGTGGCTGACGAAC TCATTAGTCATTACCACCATTGGACCTCACTCTTCCGATTTTCTATGCGGACTTAAATGT GTCTTGTACCAGGCTGAAACGATAGTTGGAGCACGCGATCGATCTTATTTGATTCGTGGA TCTG