Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0421700-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:20847290:20851602:-1 gene:Os04g0421700 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAR1 domain containing protein. (Os04t0421700-01)
Sequence	ATGAGCTCGCCGGCAGAGCCCCCTCCACCGGAGCACCCCCCTACTCCAGCTCCAGCGCCA GCGCCCGCTTCCCCGCCTCCACACCCCGCCGCCTCAGGCAATGAGGCCGCCGCCCCACCA AAACCTAACCCCCCAATCACACCCGCGCCTGCCCGGAATGCCTCCGCCGCGCCGCCATCC GGATCGCCGGCTACCGCCGCCGCCGCAGCCCCCGTGCCATCCCGAAAGGAATCCGGGTCT ACATCCGCCGCCGCCCCCGCGGCGGCGACCCGGAAGGCCTCGGGGGTAGCCGCCGCCACC ACCGGTGTGCTACCTCGGAAGCCCCCCGGGACCACTGCCCCCGTCGCCGCCCGGAACATC CCGGCGACCACCGCGGCGTCCCGGACCGCCACGAGGGCCACCACCACCACTACCGCCACC TCGGTGTCCCGAAGGCCCGCCGCCGCCGCCGCCGCAGTGGCCTCCCGAATTCCCTTGAGG GCAACTGATGCCACGACGACCCACGCGGCATCCCGAAATCCCTTGACGGGAGCCGCCGCC GCCACCGCCACCGTTGCCGCGGTGGGGAGGGGCGGATTCCGGGCCGCTCCTACACGCCCG GAGGAGTACACGCCGCGGATGGGGATGGAGTTCGAGAGCGAGCACGAGGCGTACGAGTTC TACCGCTACTACGGCTGGAAAGTAGGGTTCAACGTCCGGAAGGAGTACGCCAACAAGAGC AAGAAGACCGGCGAGATCACCTCCCGGAAGTTCGCCTGCTCCCGCGAGGGCTACAGGGCC AACGTCAAGCGGGGCAACCACATGGTGCCGATGCCGGACTCGAGGACCGGCTGCAACGCG CACCTCGTCATCCGCCGCAAGAAGCCCGGCGCCAAGCTGGAGGTTTACGCCTTCCAGCCG CGGCACAACCACCCGCTCTTCGCTACATCCTGCATGCCCAATCCTCTGCAGCCCAATGTC GTGCACTGGACGACATTGCCCGATGCCGTTACGCCGCCTGATCTTCTGATGGACGGGGGT GAGGTGGGAGGGCAGAATTCTACCGAAGAGAATAGTACCGCGAGTGCAGGGGAAGGGCGC CGGCAGCCGCTGCGAACCAGGAGGCAATGGGAGATGAAGTATGGAGAAGCTGGTGCTTTG TTAAATTATTTTCAAGACCAGTCTCTGGCTAACCCCTCGTTCTACCATTCCGTGCAGTTG GATGTCGAGGATAAGGTGGCAAATGTTTTCTGGGCCGATCCAAGGATGATTACTGACTAC AGTCAGTTCGGTGATGTTATTGCATTTGATGTGGTGTCTAGGAACAGTATAAGCCTCCGT CATTTTGCCTCTTTTGTCGGTTGTAACAATTTTGGTGAGCCTATTGTTTTTGGGTTAGCG CTCATGTATGACGAGACTGCAGAGTCTTTCCAGTGGCTGTTTGAGACTTTCTTGCATGCA ATGTCTGGACGAGCACCCAAAACTTTCTTTTCACATCAAGATGCGGTTGTAGCAAAGGCT GTCTCTATAGTGATGCCAGACACAACCCATGTTATATGTGCATGGCACCTAAAGCATGCT GCAACGAGGAACATAAATCAGCTTAAAAGTGACAGTGATTTCATGAAGGAGTTCAAGGCA TGCATCAATTTGTATGAAGAGGAGACGGAATTTCTCACTTCTTGGGATGCTATGATCAAT AAGCATAACCTTCATGATAATGTATGGTTGAAAAAGGTATTTGAAGAAAAAGAAAAATGG GCTAGACCTTATATGAGAGGGGTCTTTTCAGCTGGAATGAAAGGCACACGATTGAACGAC CGCTTCCAGTCTGATGTGCGGGATCATTTGAGACCTGAGGTAAATATTCTTTTATTGTTG AGGCATCTTGAGACAGTTATTAATGATAGGCGGCGGAAAGAATTGGAGGTTGAGTATAGT TCAAGGCTAAAGTTGCTGTACTTTAAAATTAAAGCTCCTATCCTGACACAAGCTTTTGAG GCTTATACCAATACGATCTTTCCGCTTTTTCAAGAAGAATACGAAGAATTCCAGTCAGCT TACATTGTAAACCGTGATGAAAGTGGCCCTTGTCGTGAGTATGTCGTTTCAGTTGTTGAG AAAGAGAAGCGATATACAGTTTATGGAAACCCTACTGAGCAGACTGTTTCATGCTCATGT AAGAAGTTTGAAAGAAATGGTTTCTTGTGTAGCCACGCGCTGAAAATTTTAGATGCAATG GATATAAAATATCTACCAGACAGATATATTATGAAGCGCTGGACAAAATATGCTAGGACT TTGATGTCTGGAGATGTTCAAGGTCAAGCAATTCAAGCAGATAAATTATCAGAATCCTCC AGTCGCTATCAATACATGTGCCCAAAGTATGTTAGGCTTGTTGCTCGAGCATCAGAATGT GAGGAATCCTACAGAGTACTGGACCAATGTTGGGTAGATCTTAGCAACAAAGTTGAAGAA ATCCTACAGAAACAAACTTGTGTCGATGCAACTCTGACCCAGACTGATGTTCAGAACCTT AAGGTTTCCTTACCTTCTATTACAAACGGCACTCAAGCAGAAAATATCATGGACAAATCA AGTGGCACAACAGCAAAAGAGTCAAAGAAGAAGGGGCAGAAAAATAAGATCCAATCAAGA AATTGCATTGAAAAAGGTTTACGAAAGAAGCAGAAGGTTCACTCAGAACAACCTTCAGAG TATGCTTTGTTAGGTGGTTCTCAATCTGGAAACATGTTTCAGGCTTTCGAGGGTCCTCCT AACATGTCCCCACTGGGTACCCAAACTCCGACCTATAAAACCTACAGGGGGATTGATCTT TCAAGTCCGATGGGCCCAATTAGCTATGATGAAATGCCCTCTGGCTTAGATCCGACTTTC ACGACGCATCTAGGTTTTGCAACCTATCACACTTCTCAGGTGTCAAGTAGCAGCCCACAC AACCAGGCCTTGTAG

Peptide Sequence

PEP ID	Os04t0421700-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:20847290:20851602:-1 gene:Os04g0421700 transcript:Os04t0421700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAR1 domain containing protein. (Os04t0421700-01)
Sequence	MSSPAEPPPPEHPPTPAPAPAPASPPPHPAASGNEAAAPPKPNPPITPAPARNASAAPPS GSPATAAAAAPVPSRKESGSTSAAAPAAATRKASGVAAATTGVLPRKPPGTTAPVAARNI PATTAASRTATRATTTTTATSVSRRPAAAAAAVASRIPLRATDATTTHAASRNPLTGAAA ATATVAAVGRGGFRAAPTRPEEYTPRMGMEFESEHEAYEFYRYYGWKVGFNVRKEYANKS KKTGEITSRKFACSREGYRANVKRGNHMVPMPDSRTGCNAHLVIRRKKPGAKLEVYAFQP RHNHPLFATSCMPNPLQPNVVHWTTLPDAVTPPDLLMDGGEVGGQNSTEENSTASAGEGR RQPLRTRRQWEMKYGEAGALLNYFQDQSLANPSFYHSVQLDVEDKVANVFWADPRMITDY SQFGDVIAFDVVSRNSISLRHFASFVGCNNFGEPIVFGLALMYDETAESFQWLFETFLHA MSGRAPKTFFSHQDAVVAKAVSIVMPDTTHVICAWHLKHAATRNINQLKSDSDFMKEFKA CINLYEEETEFLTSWDAMINKHNLHDNVWLKKVFEEKEKWARPYMRGVFSAGMKGTRLND RFQSDVRDHLRPEVNILLLLRHLETVINDRRRKELEVEYSSRLKLLYFKIKAPILTQAFE AYTNTIFPLFQEEYEEFQSAYIVNRDESGPCREYVVSVVEKEKRYTVYGNPTEQTVSCSC KKFERNGFLCSHALKILDAMDIKYLPDRYIMKRWTKYARTLMSGDVQGQAIQADKLSESS SRYQYMCPKYVRLVARASECEESYRVLDQCWVDLSNKVEEILQKQTCVDATLTQTDVQNL KVSLPSITNGTQAENIMDKSSGTTAKESKKKGQKNKIQSRNCIEKGLRKKQKVHSEQPSE YALLGGSQSGNMFQAFEGPPNMSPLGTQTPTYKTYRGIDLSSPMGPISYDEMPSGLDPTF TTHLGFATYHTSQVSSSSPHNQAL

Transcript Sequence

Transcript ID	Os04t0421700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:20847290:20851602:-1 gene:Os04g0421700 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAR1 domain containing protein. (Os04t0421700-01)
Sequence	AGTGCACTTCCCCTCCTCTCCCGAAAGCTGTCTTGTTTGCACGAAAGCGTTACAGAGCTA CGGCGGCGAGCACCGGCTCCAACCCCTCCCCCGTCGCCGCGCCCGCCGGCGATGAGCTCG CCGGCAGAGCCCCCTCCACCGGAGCACCCCCCTACTCCAGCTCCAGCGCCAGCGCCCGCT TCCCCGCCTCCACACCCCGCCGCCTCAGGCAATGAGGCCGCCGCCCCACCAAAACCTAAC CCCCCAATCACACCCGCGCCTGCCCGGAATGCCTCCGCCGCGCCGCCATCCGGATCGCCG GCTACCGCCGCCGCCGCAGCCCCCGTGCCATCCCGAAAGGAATCCGGGTCTACATCCGCC GCCGCCCCCGCGGCGGCGACCCGGAAGGCCTCGGGGGTAGCCGCCGCCACCACCGGTGTG CTACCTCGGAAGCCCCCCGGGACCACTGCCCCCGTCGCCGCCCGGAACATCCCGGCGACC ACCGCGGCGTCCCGGACCGCCACGAGGGCCACCACCACCACTACCGCCACCTCGGTGTCC CGAAGGCCCGCCGCCGCCGCCGCCGCAGTGGCCTCCCGAATTCCCTTGAGGGCAACTGAT GCCACGACGACCCACGCGGCATCCCGAAATCCCTTGACGGGAGCCGCCGCCGCCACCGCC ACCGTTGCCGCGGTGGGGAGGGGCGGATTCCGGGCCGCTCCTACACGCCCGGAGGAGTAC ACGCCGCGGATGGGGATGGAGTTCGAGAGCGAGCACGAGGCGTACGAGTTCTACCGCTAC TACGGCTGGAAAGTAGGGTTCAACGTCCGGAAGGAGTACGCCAACAAGAGCAAGAAGACC GGCGAGATCACCTCCCGGAAGTTCGCCTGCTCCCGCGAGGGCTACAGGGCCAACGTCAAG CGGGGCAACCACATGGTGCCGATGCCGGACTCGAGGACCGGCTGCAACGCGCACCTCGTC ATCCGCCGCAAGAAGCCCGGCGCCAAGCTGGAGGTTTACGCCTTCCAGCCGCGGCACAAC CACCCGCTCTTCGCTACATCCTGCATGCCCAATCCTCTGCAGCCCAATGTCGTGCACTGG ACGACATTGCCCGATGCCGTTACGCCGCCTGATCTTCTGATGGACGGGGGTGAGGTGGGA GGGCAGAATTCTACCGAAGAGAATAGTACCGCGAGTGCAGGGGAAGGGCGCCGGCAGCCG CTGCGAACCAGGAGGCAATGGGAGATGAAGTATGGAGAAGCTGGTGCTTTGTTAAATTAT TTTCAAGACCAGTCTCTGGCTAACCCCTCGTTCTACCATTCCGTGCAGTTGGATGTCGAG GATAAGGTGGCAAATGTTTTCTGGGCCGATCCAAGGATGATTACTGACTACAGTCAGTTC GGTGATGTTATTGCATTTGATGTGGTGTCTAGGAACAGTATAAGCCTCCGTCATTTTGCC TCTTTTGTCGGTTGTAACAATTTTGGTGAGCCTATTGTTTTTGGGTTAGCGCTCATGTAT GACGAGACTGCAGAGTCTTTCCAGTGGCTGTTTGAGACTTTCTTGCATGCAATGTCTGGA CGAGCACCCAAAACTTTCTTTTCACATCAAGATGCGGTTGTAGCAAAGGCTGTCTCTATA GTGATGCCAGACACAACCCATGTTATATGTGCATGGCACCTAAAGCATGCTGCAACGAGG AACATAAATCAGCTTAAAAGTGACAGTGATTTCATGAAGGAGTTCAAGGCATGCATCAAT TTGTATGAAGAGGAGACGGAATTTCTCACTTCTTGGGATGCTATGATCAATAAGCATAAC CTTCATGATAATGTATGGTTGAAAAAGGTATTTGAAGAAAAAGAAAAATGGGCTAGACCT TATATGAGAGGGGTCTTTTCAGCTGGAATGAAAGGCACACGATTGAACGACCGCTTCCAG TCTGATGTGCGGGATCATTTGAGACCTGAGGTAAATATTCTTTTATTGTTGAGGCATCTT GAGACAGTTATTAATGATAGGCGGCGGAAAGAATTGGAGGTTGAGTATAGTTCAAGGCTA AAGTTGCTGTACTTTAAAATTAAAGCTCCTATCCTGACACAAGCTTTTGAGGCTTATACC AATACGATCTTTCCGCTTTTTCAAGAAGAATACGAAGAATTCCAGTCAGCTTACATTGTA AACCGTGATGAAAGTGGCCCTTGTCGTGAGTATGTCGTTTCAGTTGTTGAGAAAGAGAAG CGATATACAGTTTATGGAAACCCTACTGAGCAGACTGTTTCATGCTCATGTAAGAAGTTT GAAAGAAATGGTTTCTTGTGTAGCCACGCGCTGAAAATTTTAGATGCAATGGATATAAAA TATCTACCAGACAGATATATTATGAAGCGCTGGACAAAATATGCTAGGACTTTGATGTCT GGAGATGTTCAAGGTCAAGCAATTCAAGCAGATAAATTATCAGAATCCTCCAGTCGCTAT CAATACATGTGCCCAAAGTATGTTAGGCTTGTTGCTCGAGCATCAGAATGTGAGGAATCC TACAGAGTACTGGACCAATGTTGGGTAGATCTTAGCAACAAAGTTGAAGAAATCCTACAG AAACAAACTTGTGTCGATGCAACTCTGACCCAGACTGATGTTCAGAACCTTAAGGTTTCC TTACCTTCTATTACAAACGGCACTCAAGCAGAAAATATCATGGACAAATCAAGTGGCACA ACAGCAAAAGAGTCAAAGAAGAAGGGGCAGAAAAATAAGATCCAATCAAGAAATTGCATT GAAAAAGGTTTACGAAAGAAGCAGAAGGTTCACTCAGAACAACCTTCAGAGTATGCTTTG TTAGGTGGTTCTCAATCTGGAAACATGTTTCAGGCTTTCGAGGGTCCTCCTAACATGTCC CCACTGGGTACCCAAACTCCGACCTATAAAACCTACAGGGGGATTGATCTTTCAAGTCCG ATGGGCCCAATTAGCTATGATGAAATGCCCTCTGGCTTAGATCCGACTTTCACGACGCAT CTAGGTTTTGCAACCTATCACACTTCTCAGGTGTCAAGTAGCAGCCCACACAACCAGGCC TTGTAGATATGAATGCCTCATTGCAAGGTGCTGTGCTTCTCTCTTTTGAGCACAGCACGG AACATGTAAGCTCCATCTTGGCGTCTTGTAGATTGGAGGCTCGAGATGATTAGATGTCAT CCATCGACTATAGATGGCATGGACCAGCTAGAAATGGGCATATACATCATTGGTATGTAG CAGTTCAATTAGTACAAGTAGCTGTAGTTACTAGCTACTCTTTCTTTCTTGCAACTTGAG TTGATTATTTCTTATTGTAGTTGGCAGGTTGGTACTAAGAGCTGGATTACCTCTTTACCT TAGCCTGTATGAATGTATATATATATTCTCAGATGTACAACTTGTAGGCCATAAGATGGC GTCTGCCTTTTGTGCGCAGGAAATGCTTCAAGATGTAACCACAACTTAACTTATGTCATT CCCCCTAGTCTTTCTGTTTTTCATTACCCTAGGGAGGTCGACTTATGTACATGACTACTG GGGCTGTCTGGTTATCTGTAGAATCACTTTGGACAAGAGGAAAGGATGAATATTTAGTTA TTT