Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0420900-02
CDS Infomation

cds chromosome:IRGSP-1.0:4:20817936:20820655:1 gene:Os04g0420900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525E10.7 protein. (Os04t0420900-01);Similar to Receptor-like protein kinase. (Os04t0420900-02)
Sequence

ATGCTTCTCCCTTGTCATGTCCTTCTTGGCCTCCTGCTCCTCTCCCTGCACACTCCGGCG
AGCTCCGCCGCCGCCACGGATACCGTGTCACCCGGCCATTCACTTGCCGGCAGTGACAGG
CTTGTCTCCAATAACAGTAAGTTCGCCCTCGGCTTCTTCAAGCCAGGTAATGAGTCCTCC
TACACCAACCACAACTCCTACCTTGGCATATGGTTCAACAAGGTCTCCAAGCTAACCCCG
TTGTGGACCGCCAATGGCGAGAATCCAGTGGTGGACCCCACTTCACCGGAGCTCGCAATC
TCCGGTGATGGAAACCTGGCCATCCTGGATCATGCCACCAAATCCATCATATGGTCTACC
CGTGCCAACATCACAACCAATGACACCATTGCCGTGCTTCTGAACAATGGCAACCTTGTC
CTACGAAGCTCCTCAAACTCATCCAACATTTTCTGGCAGAGCTTCGACTACCCAACAGAT
ACACTTTTCGCTGGTGCAAAGATTGGCTGGGACAAGGTCACCGGCATGAACCGCCGTCTT
GTTTCCAGGAAAAGTTCGGTTGATCAGGCTCCTGGTATATTTTCCTTGGAGTTAGGGCTC
AATGGGGAGGGTCATCTGCTATGGAACTCAACTGTGGCGTATTGGTCCAGTGGGGACTGG
AACGGTCGATACTTCGGCCTAGCGCCAGAGATGATAGGCGATGTCATGCCAAATTTCACA
TTTGTCCACAATGACAAAGAGGCCTACTTCACATACACCTTGTATGATGACACGGCTATC
GTGCACGCTGGACTAGATGTCTTTGGGATAGGTTTTGTGGGTATGTGGTTGGAAGGAAAC
CAAGAATGGTTCAAGAATTACAGGCAGCCTGTAGTTCACTGTGATGTGTATGCAGTTTGT
GGACCTTTCACAATCTGTGACGACAATAAGGATCTGTTCTGTGACTGTATGAAGGGCTTC
TCCGTAAGATCACCGAAGGATTGGGAGCTTGACGATCAAACAGGAGGTTGCATCAGGAAT
ACTCCATTAAGTTGTGGAAGTAGCAAGGACAGGACAAGCCTCACAGATAAGTTCTACCCT
ATGCAAAGTATTAGGTTACCCCACAATGCAGAAAATGTGCAGGCTGCAACCAGTGGAGAT
GAATGCTCACAGGTTTGCTTGAGCAACTGCTCCTGTACTGCATATTCCTATGGGAAAGAT
GGCTGCTCCATTTGGCATGATGAGTTGTATAACGTGAAGCAACTATCTGATGCTTCTTCA
GACAGAAATGGGGGAGTTCTTTACATTCGCCTTGCTGCAAAAGAGTTGCCAGGTTCAGAA
AAGAAGAAGAATAGAAATATAAGTGGTTTTGCCATTGGTGCAAGCACTGCCACTTTGTTT
TTGATGATCCTTCTACTGATACTTTGGAGGAGAAAAGGGAAATGGTTTACTCGCACATTG
CAAAAGCCTGAGGGTGGCATTGGGGTCGTTGCATTTCGATATATTAATTTGCAACGGGCA
ACTAAAGCCTTTTCAGAGAAGTTGGGGGGAGGAAGTTTTGGTTCTGTATTTAAGGGGTAC
CTAGGCAACTCTACCATAGCCGTGAAAAGGCTCGATGGAGCCTATCAAGGAGAGAAGCAA
TTCAGGGCTGAAGTGAATTCAATTGGAATCATCCAGCATATTAACTTAGTTAAACTGATT
GGGTTTTGTTGTGAAGGTGATAACAGGTTACTTGTGTATGAATACATGCCAAACCGCTCC
CTTGATGTGTGCTTGTTCGAGGCTAATGATATAGTTTTGGATTGGACTACTAGGTACCAA
GTAGCTACTGGAGTTGCAAGAGGTCTTGCTTACTTGCATAATAGTTGTCGGGATTGCATC
ATACATTGTGATATCAAGCCAGAGAATATACTTCTCGATGCATCTTATGTGCCTAAAATT
GCAGATTTTGGAATGGCAAAGATTTTGGGGAGGGAATTTAGCCGTGCAATGACAACAATG
AGAGGAACTATTGGATATATGGCTCCTGAATGGATTAGTGGAACAGTTGTTACATCAAAA
GTAGATGTTTACAGCTATGGAATGGTTTTGTTTGAGATCATATCAGGAAGGAGGAACTCA
AGTCATGAATGTTTCAGGGATGGTGATTATTCATTCTTTTTTCCCATGCAAGTTGCACGC
AAACTTCTCAATGGAGACATCGGAAGTCTTGTGGATGCCAGTTTGAAAGGTGACATGAAC
CTAGTGGAGGTTGAAAGAGCTTGCAAAATTGCATGTTGGTGCATTCAAGACAACGAATTT
GATCGACCAACAATGGCTGAGGTGGTACAGGCCCTTGAGGGTCTACTTGAACTCGACATG
CCTCCATTGCCAAGACTACTAAGTGCTATCACAGGAGACTCACATTCAGTGACACCACAA
TATTTTGATTCAGTGTAA

Peptide Sequence

PEP ID

Os04t0420900-02
PEP Infomation

pep chromosome:IRGSP-1.0:4:20817936:20820655:1 gene:Os04g0420900 transcript:Os04t0420900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525E10.7 protein. (Os04t0420900-01);Similar to Receptor-like protein kinase. (Os04t0420900-02)
Sequence

MLLPCHVLLGLLLLSLHTPASSAAATDTVSPGHSLAGSDRLVSNNSKFALGFFKPGNESS
YTNHNSYLGIWFNKVSKLTPLWTANGENPVVDPTSPELAISGDGNLAILDHATKSIIWST
RANITTNDTIAVLLNNGNLVLRSSSNSSNIFWQSFDYPTDTLFAGAKIGWDKVTGMNRRL
VSRKSSVDQAPGIFSLELGLNGEGHLLWNSTVAYWSSGDWNGRYFGLAPEMIGDVMPNFT
FVHNDKEAYFTYTLYDDTAIVHAGLDVFGIGFVGMWLEGNQEWFKNYRQPVVHCDVYAVC
GPFTICDDNKDLFCDCMKGFSVRSPKDWELDDQTGGCIRNTPLSCGSSKDRTSLTDKFYP
MQSIRLPHNAENVQAATSGDECSQVCLSNCSCTAYSYGKDGCSIWHDELYNVKQLSDASS
DRNGGVLYIRLAAKELPGSEKKKNRNISGFAIGASTATLFLMILLLILWRRKGKWFTRTL
QKPEGGIGVVAFRYINLQRATKAFSEKLGGGSFGSVFKGYLGNSTIAVKRLDGAYQGEKQ
FRAEVNSIGIIQHINLVKLIGFCCEGDNRLLVYEYMPNRSLDVCLFEANDIVLDWTTRYQ
VATGVARGLAYLHNSCRDCIIHCDIKPENILLDASYVPKIADFGMAKILGREFSRAMTTM
RGTIGYMAPEWISGTVVTSKVDVYSYGMVLFEIISGRRNSSHECFRDGDYSFFFPMQVAR
KLLNGDIGSLVDASLKGDMNLVEVERACKIACWCIQDNEFDRPTMAEVVQALEGLLELDM
PPLPRLLSAITGDSHSVTPQYFDSV

Transcript Sequence

Transcript ID

Os04t0420900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:20817936:20820655:1 gene:Os04g0420900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525E10.7 protein. (Os04t0420900-01);Similar to Receptor-like protein kinase. (Os04t0420900-02)
Sequence

GTTTTCCTTCTCCACCACTCTTCCCCCGTGTTCATCTTCTGCTTCCCCATGCTTCTCCCT
TGTCATGTCCTTCTTGGCCTCCTGCTCCTCTCCCTGCACACTCCGGCGAGCTCCGCCGCC
GCCACGGATACCGTGTCACCCGGCCATTCACTTGCCGGCAGTGACAGGCTTGTCTCCAAT
AACAGTAAGTTCGCCCTCGGCTTCTTCAAGCCAGGTAATGAGTCCTCCTACACCAACCAC
AACTCCTACCTTGGCATATGGTTCAACAAGGTCTCCAAGCTAACCCCGTTGTGGACCGCC
AATGGCGAGAATCCAGTGGTGGACCCCACTTCACCGGAGCTCGCAATCTCCGGTGATGGA
AACCTGGCCATCCTGGATCATGCCACCAAATCCATCATATGGTCTACCCGTGCCAACATC
ACAACCAATGACACCATTGCCGTGCTTCTGAACAATGGCAACCTTGTCCTACGAAGCTCC
TCAAACTCATCCAACATTTTCTGGCAGAGCTTCGACTACCCAACAGATACACTTTTCGCT
GGTGCAAAGATTGGCTGGGACAAGGTCACCGGCATGAACCGCCGTCTTGTTTCCAGGAAA
AGTTCGGTTGATCAGGCTCCTGGTATATTTTCCTTGGAGTTAGGGCTCAATGGGGAGGGT
CATCTGCTATGGAACTCAACTGTGGCGTATTGGTCCAGTGGGGACTGGAACGGTCGATAC
TTCGGCCTAGCGCCAGAGATGATAGGCGATGTCATGCCAAATTTCACATTTGTCCACAAT
GACAAAGAGGCCTACTTCACATACACCTTGTATGATGACACGGCTATCGTGCACGCTGGA
CTAGATGTCTTTGGGATAGGTTTTGTGGGTATGTGGTTGGAAGGAAACCAAGAATGGTTC
AAGAATTACAGGCAGCCTGTAGTTCACTGTGATGTGTATGCAGTTTGTGGACCTTTCACA
ATCTGTGACGACAATAAGGATCTGTTCTGTGACTGTATGAAGGGCTTCTCCGTAAGATCA
CCGAAGGATTGGGAGCTTGACGATCAAACAGGAGGTTGCATCAGGAATACTCCATTAAGT
TGTGGAAGTAGCAAGGACAGGACAAGCCTCACAGATAAGTTCTACCCTATGCAAAGTATT
AGGTTACCCCACAATGCAGAAAATGTGCAGGCTGCAACCAGTGGAGATGAATGCTCACAG
GTTTGCTTGAGCAACTGCTCCTGTACTGCATATTCCTATGGGAAAGATGGCTGCTCCATT
TGGCATGATGAGTTGTATAACGTGAAGCAACTATCTGATGCTTCTTCAGACAGAAATGGG
GGAGTTCTTTACATTCGCCTTGCTGCAAAAGAGTTGCCAGGTTCAGAAAAGAAGAAGAAT
AGAAATATAAGTGGTTTTGCCATTGGTGCAAGCACTGCCACTTTGTTTTTGATGATCCTT
CTACTGATACTTTGGAGGAGAAAAGGGAAATGGTTTACTCGCACATTGCAAAAGCCTGAG
GGTGGCATTGGGGTCGTTGCATTTCGATATATTAATTTGCAACGGGCAACTAAAGCCTTT
TCAGAGAAGTTGGGGGGAGGAAGTTTTGGTTCTGTATTTAAGGGGTACCTAGGCAACTCT
ACCATAGCCGTGAAAAGGCTCGATGGAGCCTATCAAGGAGAGAAGCAATTCAGGGCTGAA
GTGAATTCAATTGGAATCATCCAGCATATTAACTTAGTTAAACTGATTGGGTTTTGTTGT
GAAGGTGATAACAGGTTACTTGTGTATGAATACATGCCAAACCGCTCCCTTGATGTGTGC
TTGTTCGAGGCTAATGATATAGTTTTGGATTGGACTACTAGGTACCAAGTAGCTACTGGA
GTTGCAAGAGGTCTTGCTTACTTGCATAATAGTTGTCGGGATTGCATCATACATTGTGAT
ATCAAGCCAGAGAATATACTTCTCGATGCATCTTATGTGCCTAAAATTGCAGATTTTGGA
ATGGCAAAGATTTTGGGGAGGGAATTTAGCCGTGCAATGACAACAATGAGAGGAACTATT
GGATATATGGCTCCTGAATGGATTAGTGGAACAGTTGTTACATCAAAAGTAGATGTTTAC
AGCTATGGAATGGTTTTGTTTGAGATCATATCAGGAAGGAGGAACTCAAGTCATGAATGT
TTCAGGGATGGTGATTATTCATTCTTTTTTCCCATGCAAGTTGCACGCAAACTTCTCAAT
GGAGACATCGGAAGTCTTGTGGATGCCAGTTTGAAAGGTGACATGAACCTAGTGGAGGTT
GAAAGAGCTTGCAAAATTGCATGTTGGTGCATTCAAGACAACGAATTTGATCGACCAACA
ATGGCTGAGGTGGTACAGGCCCTTGAGGGTCTACTTGAACTCGACATGCCTCCATTGCCA
AGACTACTAAGTGCTATCACAGGAGACTCACATTCAGTGACACCACAATATTTTGATTCA
GTGTAAATCTATATGCTGATTCACAATTAAAAGTAGTCTACCAGGACATTATAATTCATC
TTGCCTTTTTAGAAAATTAGGGATAACATCTAAGGTCTTTAAGAGATCATGTTAAATAAA
CTCGTAGTTATTAAGATCTCTGTGCCCAAGCAGGAGATCGTGCCAGCCTTCCAGACAAAA
TATATTTTGTGTCTATGTAAGATCTGTAGGTATTAGTGTACCGTATACATTTTTCATGTT
GCCAATTGAGATGTTTCCGG