Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0418500-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:20690867:20692518:1 gene:Os04g0418500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 46, U-box protein 46 description:Similar to photoperiod responsive protein. (Os04t0418500-01)
Sequence	ATGGGCAGGAAGGAATCGTCGACGACGACGACGACGACGGCGGCGGCGGCGGCGGCGGCG ACGAGGAGCATGAGGCTGCCGCCGCAGCACCAGGCGCTGGAGGTGAAGATCCCGAGCTTC TTCCGGTGCCCCATCTCCCTCGACGTGATGCGCTCCCCGGTCAGCCTCTGCACCGGCGTC ACCTACGACCGCGCCTCCATCCAGCGATGGCTCGACTCCGGCAACACCACCTGCCCCGCC ACCATGCTCCCCCTCCCTTCCACCGACCTCGTCCCCAACCTCACCCTCCGCAGCCTCATC TCCCACTGGTCCTCCTCCTCCCCCGCCACCTCCGGCGATGCCTCTGTCACTTCTTCCCCC GCGGGCCTTGTCCGCCAGGTCGCGTCGCCCGACGCCGACCCTTCCGCGGCGCTGCGCCAG CTCGCGGCGTACCTCTCGGACGACGACGTCGACGAGTTCGAGAAGAACGCGCTGGTGGGC GCCGGTGGCGCCGCCGAGGCCGTGGCCTCGGTGCTCCGGAGGAAGGGCGAGCGGGAGGTC GGCGTGGAAGGGTGCGAGGCGGCGGTGCGGGTGCTCGCCGCGGTCGTCGCGATGGATGGA GTCGAGGACGCGAACAAGAGGCGGGTCGCCGCCGGGCTCGCCGCGGACGCCGCGGCGTCG GCGGCGTCCCTGGCGCGCGTGATGCGCGGAGCGAGCGGGCTGGAGGCGAGGGTCGACGCG GCGAGGCTGGTGGAGTTCCTGCTCGCCAATGCCGCCGACGAGGCGAGGGAGGCGGTGGCC GAGTCGGCCGAGCTCGTCGCCGAGCTGGTGCGGCTCGTCGGCCCCGCCGACGAGAAGGGG AGCCTCGACGCGAGGGCCGTCGGCGCGGGCCTCTCCTGCCTCGCCACCATCTCCCGGTCG CGCCGCGCCGCGCGCGCCGAGATGGTCCGCGCCGGCACCGTCCGCGCCGCGGCGCGCGCG CTGCGCGCCACGGCGGCGGACCCGGCCGCGTCCGCCAGGGCGCTCCGGGTCCTCGAGTCC GCCGTCGGCTGCGCCGAGGGCCGCGCCGCGCTCTGCGAGGACGCCGAGCAGGCCGTACCC GCGGTGGTGGGCAGGATGATGAAGGCCGGCCGCGACGGCGCCGAGGCCGCGGAGGCCGTG CTCTGGGCGGTCTGCCACAAGTACAGGGACCGGCGCGCCGCCGACGCCGCGGCGGCGTCG GAGGGCGGCCTGACTCGCCTCCTCCTGCTGCTGCAGAGCGGGTGCTCGCCGGCGGCGAGG CAGATGGCGCTCGAGCTGCTCAAGATTTACAAGGTGAACGCCAAGAGCTGCCTCGCCGGC TACGACTCCAAGACCACCCACATCATGCCGTTCTGA

Peptide Sequence

PEP ID	Os04t0418500-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:20690867:20692518:1 gene:Os04g0418500 transcript:Os04t0418500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 46, U-box protein 46 description:Similar to photoperiod responsive protein. (Os04t0418500-01)
Sequence	MGRKESSTTTTTTAAAAAAATRSMRLPPQHQALEVKIPSFFRCPISLDVMRSPVSLCTGV TYDRASIQRWLDSGNTTCPATMLPLPSTDLVPNLTLRSLISHWSSSSPATSGDASVTSSP AGLVRQVASPDADPSAALRQLAAYLSDDDVDEFEKNALVGAGGAAEAVASVLRRKGEREV GVEGCEAAVRVLAAVVAMDGVEDANKRRVAAGLAADAAASAASLARVMRGASGLEARVDA ARLVEFLLANAADEAREAVAESAELVAELVRLVGPADEKGSLDARAVGAGLSCLATISRS RRAARAEMVRAGTVRAAARALRATAADPAASARALRVLESAVGCAEGRAALCEDAEQAVP AVVGRMMKAGRDGAEAAEAVLWAVCHKYRDRRAADAAAASEGGLTRLLLLLQSGCSPAAR QMALELLKIYKVNAKSCLAGYDSKTTHIMPF

Transcript Sequence

Transcript ID	Os04t0418500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:20690867:20692518:1 gene:Os04g0418500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 46, U-box protein 46 description:Similar to photoperiod responsive protein. (Os04t0418500-01)
Sequence	ACTTCCATTTCCAAGAATCGAACGGAGGCGTCTCGCTATCGCCATCGCCATCGCCATGGG CAGGAAGGAATCGTCGACGACGACGACGACGACGGCGGCGGCGGCGGCGGCGGCGACGAG GAGCATGAGGCTGCCGCCGCAGCACCAGGCGCTGGAGGTGAAGATCCCGAGCTTCTTCCG GTGCCCCATCTCCCTCGACGTGATGCGCTCCCCGGTCAGCCTCTGCACCGGCGTCACCTA CGACCGCGCCTCCATCCAGCGATGGCTCGACTCCGGCAACACCACCTGCCCCGCCACCAT GCTCCCCCTCCCTTCCACCGACCTCGTCCCCAACCTCACCCTCCGCAGCCTCATCTCCCA CTGGTCCTCCTCCTCCCCCGCCACCTCCGGCGATGCCTCTGTCACTTCTTCCCCCGCGGG CCTTGTCCGCCAGGTCGCGTCGCCCGACGCCGACCCTTCCGCGGCGCTGCGCCAGCTCGC GGCGTACCTCTCGGACGACGACGTCGACGAGTTCGAGAAGAACGCGCTGGTGGGCGCCGG TGGCGCCGCCGAGGCCGTGGCCTCGGTGCTCCGGAGGAAGGGCGAGCGGGAGGTCGGCGT GGAAGGGTGCGAGGCGGCGGTGCGGGTGCTCGCCGCGGTCGTCGCGATGGATGGAGTCGA GGACGCGAACAAGAGGCGGGTCGCCGCCGGGCTCGCCGCGGACGCCGCGGCGTCGGCGGC GTCCCTGGCGCGCGTGATGCGCGGAGCGAGCGGGCTGGAGGCGAGGGTCGACGCGGCGAG GCTGGTGGAGTTCCTGCTCGCCAATGCCGCCGACGAGGCGAGGGAGGCGGTGGCCGAGTC GGCCGAGCTCGTCGCCGAGCTGGTGCGGCTCGTCGGCCCCGCCGACGAGAAGGGGAGCCT CGACGCGAGGGCCGTCGGCGCGGGCCTCTCCTGCCTCGCCACCATCTCCCGGTCGCGCCG CGCCGCGCGCGCCGAGATGGTCCGCGCCGGCACCGTCCGCGCCGCGGCGCGCGCGCTGCG CGCCACGGCGGCGGACCCGGCCGCGTCCGCCAGGGCGCTCCGGGTCCTCGAGTCCGCCGT CGGCTGCGCCGAGGGCCGCGCCGCGCTCTGCGAGGACGCCGAGCAGGCCGTACCCGCGGT GGTGGGCAGGATGATGAAGGCCGGCCGCGACGGCGCCGAGGCCGCGGAGGCCGTGCTCTG GGCGGTCTGCCACAAGTACAGGGACCGGCGCGCCGCCGACGCCGCGGCGGCGTCGGAGGG CGGCCTGACTCGCCTCCTCCTGCTGCTGCAGAGCGGGTGCTCGCCGGCGGCGAGGCAGAT GGCGCTCGAGCTGCTCAAGATTTACAAGGTGAACGCCAAGAGCTGCCTCGCCGGCTACGA CTCCAAGACCACCCACATCATGCCGTTCTGAACTGAAAAATCGAAGCTTTTGGTCAGGGC CATCATGGAACAGGAGATCAACCTTCGTGTTCCGTTCTTTTCTTTCTTTTCTTCTTTTGT TCTTTTCTAAATGTAATTTGATGATAGAGAAAACAGGAGGAGATCGAATTGATTTGTGGA GGGAAGAAGAAAAAAATAATCTGTACATGTGTAGCGAGAGTTTTGATAGGAAAAGAAAAA TCAATGGGAAATTAACCGATGAGTTGTTGATT