Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0418000-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:20653716:20657117:1 gene:Os04g0418000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCCINATE DEHYDROGENASE SUBUNIT 5 description:Conserved hypothetical protein. (Os04t0418000-01)
Sequence

ATGGCCGCCGCCCTCCGCTCCTCCTGCGCCGCCGCGCGCCGTCTGCTCCGGATCTCCCCG
GCCGCGCTGTCCACCCTCACCGCCGCCTCCTCCCGCCCCGCCGCGGTGGCGCCCCTCGCG
CGCCCGATCGCCGCCGCCGCCGTCTCAGGTGGCAACAATGCCTTTTCATGGAACTTGAGG
CGCTTGTTCAGCTCAAATGAAAAGCATCTGCCGGCGATATCTGACCCAGAAGTTGAATCT
GCGTTTAAGGATTTGATGGCTGCTAGCTGGACTGGACTTCCAGATTCTCTTGTAATTGAA
GCAAAGAAAGCTGCATCCAAAGCTACGGATGATAAGGCTGGGAAAGAGGCTTTGCTAAAT
GTATTTCGTGCAGCTGAGGCATGTGAAGAATTTGGTGGAGTTCTAGTCACCCTAAGAATG
GCTCTAGATGATCTTTGTGGTATAACTGGTGAGAATGTGGGCCCCTTGCCTGGTTATATA
GAAGATGCTGTTAAATCTGCATATAAGCGTTACATGAAATATCTGGAATCATTTGGCCCG
GAGGAAAATTATCTACGTAAGAAAGTGGAGAATGAGTTGGGGACTAAAATGATACACCTG
AAAATGCGGTGCAGTGGTGTAGGGTCCGAGTGGGGAAAGATCACCCTGATTGGCACCTCA
GGCATCTCAGGATCCTATGTCGAGCTAAGGGCATGA

Peptide Sequence

PEP ID

Os04t0418000-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:20653716:20657117:1 gene:Os04g0418000 transcript:Os04t0418000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCCINATE DEHYDROGENASE SUBUNIT 5 description:Conserved hypothetical protein. (Os04t0418000-01)
Sequence

MAAALRSSCAAARRLLRISPAALSTLTAASSRPAAVAPLARPIAAAAVSGGNNAFSWNLR
RLFSSNEKHLPAISDPEVESAFKDLMAASWTGLPDSLVIEAKKAASKATDDKAGKEALLN
VFRAAEACEEFGGVLVTLRMALDDLCGITGENVGPLPGYIEDAVKSAYKRYMKYLESFGP
EENYLRKKVENELGTKMIHLKMRCSGVGSEWGKITLIGTSGISGSYVELRA

Transcript Sequence

Transcript ID

Os04t0418000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:20653716:20657117:1 gene:Os04g0418000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUCCINATE DEHYDROGENASE SUBUNIT 5 description:Conserved hypothetical protein. (Os04t0418000-01)
Sequence

GAAACCTCGCCCTTCGTCTCCGCCTCCGTCGCCTCCATCTCGCCGCGATCCCTCTCCCCG
GCGATGGCCGCCGCCCTCCGCTCCTCCTGCGCCGCCGCGCGCCGTCTGCTCCGGATCTCC
CCGGCCGCGCTGTCCACCCTCACCGCCGCCTCCTCCCGCCCCGCCGCGGTGGCGCCCCTC
GCGCGCCCGATCGCCGCCGCCGCCGTCTCAGGTGGCAACAATGCCTTTTCATGGAACTTG
AGGCGCTTGTTCAGCTCAAATGAAAAGCATCTGCCGGCGATATCTGACCCAGAAGTTGAA
TCTGCGTTTAAGGATTTGATGGCTGCTAGCTGGACTGGACTTCCAGATTCTCTTGTAATT
GAAGCAAAGAAAGCTGCATCCAAAGCTACGGATGATAAGGCTGGGAAAGAGGCTTTGCTA
AATGTATTTCGTGCAGCTGAGGCATGTGAAGAATTTGGTGGAGTTCTAGTCACCCTAAGA
ATGGCTCTAGATGATCTTTGTGGTATAACTGGTGAGAATGTGGGCCCCTTGCCTGGTTAT
ATAGAAGATGCTGTTAAATCTGCATATAAGCGTTACATGAAATATCTGGAATCATTTGGC
CCGGAGGAAAATTATCTACGTAAGAAAGTGGAGAATGAGTTGGGGACTAAAATGATACAC
CTGAAAATGCGGTGCAGTGGTGTAGGGTCCGAGTGGGGAAAGATCACCCTGATTGGCACC
TCAGGCATCTCAGGATCCTATGTCGAGCTAAGGGCATGAGGAAAGTCTGCAGATCATAAC
CATGGCAGAACATCGTTTTCTGAGGGAAGGATGCATATCAGAACAAGGTGTTCCGTTTCT
CTTTTCTTCTTACTGTGTAGCTACCTTGCCAATAACAAGGAGATCATCAAACAGATGTGC
ACTTAAAGTAATTCAGTGTGCTCCAGACCTTCCTGCTGTAATAAGAACGTGTTTCTGGGG
TTCACGTCGATTTGTTTTTGCTCCAGTCATGGTGGTGCGTGAAGCATGTAGATTCAGTTG
ATTCCTTGCATGAGCCGTGAATTGTTTGTTCAAGCTCCTACTCTGTATGGCTCTATTGAA
CTCAGAAGTAGCTTAATCGGTGTTCAGATTCCTTGC