Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0417800-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:20640443:20645375:-1 gene:Os04g0417800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-100 description:WD40 repeat-like domain containing protein. (Os04t0417800-01)
Sequence	ATGCCAAGTTCCGAATCAGACAGGGATGATATCTTCTTTGATGCATTTGATGATGTTACT TCAACAAGGGAGCCTTCATTGTCAGATGATTGCAGCACAAGTGACGAAGGATTAGCATCA AGGAGATTTGAGTATGATATTTGGGGAAACGAGCCAATGAGTGTTGAAGAAAGGCGGCAA AGGTTCCTGAAGGGAATGGGGTTTGATGAATTTCTTGCTACCAGAGTGGATTTTTCTCAA CCACAGGGAGAAATCACAACTGTTGGTCCTTTCGCTGACTTGGGGTTGGAGGAGAGTACT ACCAGTGACATTTCTTCCGTGAATTCATCTGTTCCTGAGAATGAATCAGTTTCTGATGCC TCCTGTTGCATAGGAGATATTGACAGTGGCGAGAGATACACAGTTCAGAATGATGGATAC GGCGAATTGACTAGCATGCTTAAGGATGTGGCATCACATAAGGTGGTGTCTCTTCTGGAG TTTGATGGCGTACCAGGCCTTTCTCAATCTGTTCAAAAGTTGTTGCGCAAGGTGTATAGC AGTTCTATGGAAGAGAAAAAGAATGTGTTTAATAAGAAAAAGGGTGTCAAGAGCTTGTGG AAGAGCTTCATGAAAAACAGGAGTTTTGGTGGAATTTGCAAGCACGACGTCAATGTAAAA AACTGCACAATAGGCATACCATCCAGAACAAAAGTTCAACATCGAAAGAAAAAAACTATG GAATTTTCTGCTGTCCATCTGGGTCAAGAAATCCAAGCTCACAAGGGTTTAATTAAAGTC ATGAAATTCAGCCCGTCAGGCTGGTATTTGGCAACTGGTGGTGAGGACTGCATTGTACGG ATATGGCAGATTATGGAAGTGGAAGCATCTTCGAAGTTGCATGGGGGAGACAACCCTCAG AACTATGATGATAAAATTACAATCATCAAAACGGAACTAGGAAGAGGGAAGAATCATGCC CTTGCAGTAGTGCCAAAGAAGGGTTTCCGCATTTCAGAGACTCCATTACATGAATTCCAA GGCCATACAGATGATATCCTGGATATGGCATGGTCAGAGTCAGATTATCTCTTGACCTCA TCAAAAGATAAGATGGTGCGTTTGTGGAAAGTTGGCTGTGATGGTTGTCTTGGACTGTTT AAACACAAAGACTACGTGACATGTGTTCAATTCAATCCTATCGATGAAAGATACTTCATC AGTGGTTCAATAGATGGAAAAGTTCGTGTTTGGGATGCTTTGGATAAGAGAGTAGTTGAC TGGACTGATACACGGAAGATCATAACTGCTCTTAGTTACCAACCGGATGGAAAGGGCTTT ATTGTTGGCACTACTTCTGGAGAATGCCGCTTTTACGATCAATCAGGTGAAAACATCCAA CTAGACAAAGAATTGTTTATGCAAGGGAAGAAGTCTGCTGTCCATCGGGTCAACAGTCTG CAGTCACGTTCAAGTGATTCCTCTAGGATTACAATAACATCAACGGGTTCCAAAATTCGA GTTGCCGATGGTGTTGATATCATTCAAAAGTTTGAAGGGCCTTGGAATTTGAAGGCTCTT TCTTCACCATCTTTAACATCAGATGGAAGATATCTCATATCTGCCGGATTGGATTCCAAT GTCTACATCTGGAACTTTGACATTCCAAGTGTCGCCGATCATAAAGGCGAAGCTAAATCG GTTCGCTCCTGTGAGAAATTCTTCTCCAAGGACGTGACAACCGCGGTACCATGGCCCGGG CTGCATCAAGAAAGACAGCAGGTGAAGAATTCTTCCAGCCTGACTGAAGAATCCGTCAGT TCACCCATTTTGCACCGCCACGGGGAACGCCGTTCCCCCGCAGCGCGGTGTTTCGCTGAC GGCATGAAGGGTACTCCGACATGGCCGGAGGAGAAGCTTCCACCTGCAAAAGCCGCTGAT GCCCCACGACTGTCTGACTGTCTCTCCACGATCTCGCCTGCTTGGAACACGGTGATCGTG ACTGCAAGTCGAGACGGTGTGATCAGGTCTTTCCACAACTACGGCTTGCCTGTGAGATTG TGA

Peptide Sequence

PEP ID	Os04t0417800-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:20640443:20645375:-1 gene:Os04g0417800 transcript:Os04t0417800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-100 description:WD40 repeat-like domain containing protein. (Os04t0417800-01)
Sequence	MPSSESDRDDIFFDAFDDVTSTREPSLSDDCSTSDEGLASRRFEYDIWGNEPMSVEERRQ RFLKGMGFDEFLATRVDFSQPQGEITTVGPFADLGLEESTTSDISSVNSSVPENESVSDA SCCIGDIDSGERYTVQNDGYGELTSMLKDVASHKVVSLLEFDGVPGLSQSVQKLLRKVYS SSMEEKKNVFNKKKGVKSLWKSFMKNRSFGGICKHDVNVKNCTIGIPSRTKVQHRKKKTM EFSAVHLGQEIQAHKGLIKVMKFSPSGWYLATGGEDCIVRIWQIMEVEASSKLHGGDNPQ NYDDKITIIKTELGRGKNHALAVVPKKGFRISETPLHEFQGHTDDILDMAWSESDYLLTS SKDKMVRLWKVGCDGCLGLFKHKDYVTCVQFNPIDERYFISGSIDGKVRVWDALDKRVVD WTDTRKIITALSYQPDGKGFIVGTTSGECRFYDQSGENIQLDKELFMQGKKSAVHRVNSL QSRSSDSSRITITSTGSKIRVADGVDIIQKFEGPWNLKALSSPSLTSDGRYLISAGLDSN VYIWNFDIPSVADHKGEAKSVRSCEKFFSKDVTTAVPWPGLHQERQQVKNSSSLTEESVS SPILHRHGERRSPAARCFADGMKGTPTWPEEKLPPAKAADAPRLSDCLSTISPAWNTVIV TASRDGVIRSFHNYGLPVRL

Transcript Sequence

Transcript ID	Os04t0417800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:20640443:20645375:-1 gene:Os04g0417800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsWD40-100 description:WD40 repeat-like domain containing protein. (Os04t0417800-01)
Sequence	GGTGGACGCGTCCAAGCAGAATCCCAAATCCCAAGCCCTCTCTCTCTCTCGCTCGCTCGC GCAGGAGCGAGAGATCCCACTCTCTCCCCACCATTTCCCCCCCCCCCCCTCTGTGTCCCC TCCTCCTCCTCTACACCTGGTTGGGCATGGCGCTGCGGCGCGGGTGGAGACGAGCGGCGG CGGCGGTTGTTCTTCCTGCCGCCTCCGTGGAGTGAACCACCGACGACGACGACGAACAAG ATGACATTTTGAGCACCGCGTGCTAACTTCACAGAGGGTGAGAGAACCCCCCTCTGTGTT GATTCTTTTTCTTGGGCTAGAAGTATTTCGGTTAGATATGCCAAGTTCCGAATCAGACAG GGATGATATCTTCTTTGATGCATTTGATGATGTTACTTCAACAAGGGAGCCTTCATTGTC AGATGATTGCAGCACAAGTGACGAAGGATTAGCATCAAGGAGATTTGAGTATGATATTTG GGGAAACGAGCCAATGAGTGTTGAAGAAAGGCGGCAAAGGTTCCTGAAGGGAATGGGGTT TGATGAATTTCTTGCTACCAGAGTGGATTTTTCTCAACCACAGGGAGAAATCACAACTGT TGGTCCTTTCGCTGACTTGGGGTTGGAGGAGAGTACTACCAGTGACATTTCTTCCGTGAA TTCATCTGTTCCTGAGAATGAATCAGTTTCTGATGCCTCCTGTTGCATAGGAGATATTGA CAGTGGCGAGAGATACACAGTTCAGAATGATGGATACGGCGAATTGACTAGCATGCTTAA GGATGTGGCATCACATAAGGTGGTGTCTCTTCTGGAGTTTGATGGCGTACCAGGCCTTTC TCAATCTGTTCAAAAGTTGTTGCGCAAGGTGTATAGCAGTTCTATGGAAGAGAAAAAGAA TGTGTTTAATAAGAAAAAGGGTGTCAAGAGCTTGTGGAAGAGCTTCATGAAAAACAGGAG TTTTGGTGGAATTTGCAAGCACGACGTCAATGTAAAAAACTGCACAATAGGCATACCATC CAGAACAAAAGTTCAACATCGAAAGAAAAAAACTATGGAATTTTCTGCTGTCCATCTGGG TCAAGAAATCCAAGCTCACAAGGGTTTAATTAAAGTCATGAAATTCAGCCCGTCAGGCTG GTATTTGGCAACTGGTGGTGAGGACTGCATTGTACGGATATGGCAGATTATGGAAGTGGA AGCATCTTCGAAGTTGCATGGGGGAGACAACCCTCAGAACTATGATGATAAAATTACAAT CATCAAAACGGAACTAGGAAGAGGGAAGAATCATGCCCTTGCAGTAGTGCCAAAGAAGGG TTTCCGCATTTCAGAGACTCCATTACATGAATTCCAAGGCCATACAGATGATATCCTGGA TATGGCATGGTCAGAGTCAGATTATCTCTTGACCTCATCAAAAGATAAGATGGTGCGTTT GTGGAAAGTTGGCTGTGATGGTTGTCTTGGACTGTTTAAACACAAAGACTACGTGACATG TGTTCAATTCAATCCTATCGATGAAAGATACTTCATCAGTGGTTCAATAGATGGAAAAGT TCGTGTTTGGGATGCTTTGGATAAGAGAGTAGTTGACTGGACTGATACACGGAAGATCAT AACTGCTCTTAGTTACCAACCGGATGGAAAGGGCTTTATTGTTGGCACTACTTCTGGAGA ATGCCGCTTTTACGATCAATCAGGTGAAAACATCCAACTAGACAAAGAATTGTTTATGCA AGGGAAGAAGTCTGCTGTCCATCGGGTCAACAGTCTGCAGTCACGTTCAAGTGATTCCTC TAGGATTACAATAACATCAACGGGTTCCAAAATTCGAGTTGCCGATGGTGTTGATATCAT TCAAAAGTTTGAAGGGCCTTGGAATTTGAAGGCTCTTTCTTCACCATCTTTAACATCAGA TGGAAGATATCTCATATCTGCCGGATTGGATTCCAATGTCTACATCTGGAACTTTGACAT TCCAAGTGTCGCCGATCATAAAGGCGAAGCTAAATCGGTTCGCTCCTGTGAGAAATTCTT CTCCAAGGACGTGACAACCGCGGTACCATGGCCCGGGCTGCATCAAGAAAGACAGCAGGT GAAGAATTCTTCCAGCCTGACTGAAGAATCCGTCAGTTCACCCATTTTGCACCGCCACGG GGAACGCCGTTCCCCCGCAGCGCGGTGTTTCGCTGACGGCATGAAGGGTACTCCGACATG GCCGGAGGAGAAGCTTCCACCTGCAAAAGCCGCTGATGCCCCACGACTGTCTGACTGTCT CTCCACGATCTCGCCTGCTTGGAACACGGTGATCGTGACTGCAAGTCGAGACGGTGTGAT CAGGTCTTTCCACAACTACGGCTTGCCTGTGAGATTGTGATGATCTGCAAATGCAAGGCA ATCAGCTTTGGTATAGTCTGACTCTGATTTGCGTGCGTGCGTGAGTGTGTTCGCTGAAGA AGAAGCTACAGAAAACTGTAGCTTTGGTGATAGCCTTTACTAACACAGTAAAGTTTTTTT GTTGGTAGTAGATGGTAGGAAGGTGAGGAGAGGATCTTATTTTTTTTGTACTGCGAATTC AGAATCTGAACTTGTGGTGCTTGTCGAAATGAGGTGGTCAATCCAGAAGCGTTTTTTCCC TCTTGTCC