Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0414800-00
CDS Infomation	cds chromosome:IRGSP-1.0:4:20499421:20501058:1 gene:Os04g0414800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os04t0414800-00)
Sequence	ATGACCACCGCCGTCCTCCGGCCATCCCCACCGGTCGCCACCCTCCTCGGCCGCTGCCGC ACCGCGCGCTGCCTCGCCCAGCTCCACGCCCGCATCGTCCGCCTCGGCCTCCACAACCAC CACGCGCTCCTCGCCCGCTTCGCCGCCGCCTGCGACGCCCTCTCCTGCCCCTCCGTCGCC GCCTCCCTCCTCTCCGTCGCCGTCCCGGTACGCCTGCGGAACGCCGTGCTCGCCTCCCTC GCCCGCCACGCCCCGCTGCGGGACGCGCTCGCGCAGTTCAACCTCCTCCGCGGGGGCGCG TCCCGCCCGGACGCCTTCTCCTTCCCTCCCCTCCTCTGCGCCTGCGCGCGCGCCTCCTCC CTCCCCACCGGCGCTTCCTTGCACGCCGCGGCCATCCGCCTCGGAGTCGACGCCGACCTC TTCGTCCGCACGGCGCTCATCCAGTTCTATGGGAGGTGCGGCGCCGCTGCCGCCGCCCGG GCTCTGTTCGATTCACTGACAAACCCCAGCGAGGTCTCTTGGACGGCCATTGTCACTGCC TATGTCAACTCTGGTGATATTTTGACTGCCAGGGAGTTGTTCGACCAAATTCCACACCGA AATGTGGTGCATTGGAATGCCATGGTTGATGGGTATGTGAAGTGCGGTGACTTGGAGGGT GCAAGGAAGCTGTTTGATGAAATGCCTGAGAGAACTCCTGCAGCGTACACATCATTGATT GGCGGGTATTTAAATGCAGGGAACATGGGAGCTGCGAGAACATTGTTTGATAAGCTAGAG GACCGTGATTTGTTCGCATGGTCAACAATGATATCAGGGTGTGCACAGAACGGTTACCCT GGAGAGGCTTTGAGGATTTTTAACGAGTTCCAAAAGCAAGAAATATGTCCAGATGAGCTT GTTATTGTTGGTTTGATGTCAGCATGCTCCCAACTTGGTAACATCACATTGGCAAGATGG ATTGAAGGTTACATCATGATTTATCCAATAGACATGAACAATGTCCATGTGATGGCGGGT CTCATTAACATGAATGCAAAGTGTGGCAACATGGAGAGAGCTACTCTTTTGTTTGAATCT ATGTCAGTTCGAGATGTTTTTTCATATTGTTCAATGATGCAAGGTCATTGCCTCCATGGT TCAGCTAGCAAGGCTGTAGAGCTTTTTTCTCAGATGCTCTTGGAGGGCATCACCCCAGAT AACGCCGCGTTCACAGTTGTTTTGACAGCTTGCAGTCATGCTGGCCTAGTTGAAGAAGGG AAAAGGTACTTTGATATGATGAAGAATGAGTATATGATTGTACCATCTGGTGACCACTAT GCTTGCCTTGTCAGTCTTCTCGGACGTTTTGGGATGCTGAGAGATGCATATGAGCTTATC AAGTCAATGCCTGGAGAACCTCATCCAGGAGCATGGGGTGCATTGCTGGGGGGATGCAAG TTTCATTGTGACATTGAGCTTGGAAAAATTGCTGCAAAGAAGCTCTTTGAAATTGAACCG GAAAATGCTGGAAATTATGTCTCGTTGTCAAACATTTATGCTAACATTGACCGATGGGGA AATGTTTCTGAAACTAGAGCTGAGATGACAGGAAGAGGGATAACGAAAATTGCAGGCTGT ACCTTGGTTTTGCAGTAG

Peptide Sequence

PEP ID	Os04t0414800-00
PEP Infomation	pep chromosome:IRGSP-1.0:4:20499421:20501058:1 gene:Os04g0414800 transcript:Os04t0414800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os04t0414800-00)
Sequence	MTTAVLRPSPPVATLLGRCRTARCLAQLHARIVRLGLHNHHALLARFAAACDALSCPSVA ASLLSVAVPVRLRNAVLASLARHAPLRDALAQFNLLRGGASRPDAFSFPPLLCACARASS LPTGASLHAAAIRLGVDADLFVRTALIQFYGRCGAAAAARALFDSLTNPSEVSWTAIVTA YVNSGDILTARELFDQIPHRNVVHWNAMVDGYVKCGDLEGARKLFDEMPERTPAAYTSLI GGYLNAGNMGAARTLFDKLEDRDLFAWSTMISGCAQNGYPGEALRIFNEFQKQEICPDEL VIVGLMSACSQLGNITLARWIEGYIMIYPIDMNNVHVMAGLINMNAKCGNMERATLLFES MSVRDVFSYCSMMQGHCLHGSASKAVELFSQMLLEGITPDNAAFTVVLTACSHAGLVEEG KRYFDMMKNEYMIVPSGDHYACLVSLLGRFGMLRDAYELIKSMPGEPHPGAWGALLGGCK FHCDIELGKIAAKKLFEIEPENAGNYVSLSNIYANIDRWGNVSETRAEMTGRGITKIAGC TLVLQ

Transcript Sequence

Transcript ID	Os04t0414800-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:20499421:20501058:1 gene:Os04g0414800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os04t0414800-00)
Sequence	ATGACCACCGCCGTCCTCCGGCCATCCCCACCGGTCGCCACCCTCCTCGGCCGCTGCCGC ACCGCGCGCTGCCTCGCCCAGCTCCACGCCCGCATCGTCCGCCTCGGCCTCCACAACCAC CACGCGCTCCTCGCCCGCTTCGCCGCCGCCTGCGACGCCCTCTCCTGCCCCTCCGTCGCC GCCTCCCTCCTCTCCGTCGCCGTCCCGGTACGCCTGCGGAACGCCGTGCTCGCCTCCCTC GCCCGCCACGCCCCGCTGCGGGACGCGCTCGCGCAGTTCAACCTCCTCCGCGGGGGCGCG TCCCGCCCGGACGCCTTCTCCTTCCCTCCCCTCCTCTGCGCCTGCGCGCGCGCCTCCTCC CTCCCCACCGGCGCTTCCTTGCACGCCGCGGCCATCCGCCTCGGAGTCGACGCCGACCTC TTCGTCCGCACGGCGCTCATCCAGTTCTATGGGAGGTGCGGCGCCGCTGCCGCCGCCCGG GCTCTGTTCGATTCACTGACAAACCCCAGCGAGGTCTCTTGGACGGCCATTGTCACTGCC TATGTCAACTCTGGTGATATTTTGACTGCCAGGGAGTTGTTCGACCAAATTCCACACCGA AATGTGGTGCATTGGAATGCCATGGTTGATGGGTATGTGAAGTGCGGTGACTTGGAGGGT GCAAGGAAGCTGTTTGATGAAATGCCTGAGAGAACTCCTGCAGCGTACACATCATTGATT GGCGGGTATTTAAATGCAGGGAACATGGGAGCTGCGAGAACATTGTTTGATAAGCTAGAG GACCGTGATTTGTTCGCATGGTCAACAATGATATCAGGGTGTGCACAGAACGGTTACCCT GGAGAGGCTTTGAGGATTTTTAACGAGTTCCAAAAGCAAGAAATATGTCCAGATGAGCTT GTTATTGTTGGTTTGATGTCAGCATGCTCCCAACTTGGTAACATCACATTGGCAAGATGG ATTGAAGGTTACATCATGATTTATCCAATAGACATGAACAATGTCCATGTGATGGCGGGT CTCATTAACATGAATGCAAAGTGTGGCAACATGGAGAGAGCTACTCTTTTGTTTGAATCT ATGTCAGTTCGAGATGTTTTTTCATATTGTTCAATGATGCAAGGTCATTGCCTCCATGGT TCAGCTAGCAAGGCTGTAGAGCTTTTTTCTCAGATGCTCTTGGAGGGCATCACCCCAGAT AACGCCGCGTTCACAGTTGTTTTGACAGCTTGCAGTCATGCTGGCCTAGTTGAAGAAGGG AAAAGGTACTTTGATATGATGAAGAATGAGTATATGATTGTACCATCTGGTGACCACTAT GCTTGCCTTGTCAGTCTTCTCGGACGTTTTGGGATGCTGAGAGATGCATATGAGCTTATC AAGTCAATGCCTGGAGAACCTCATCCAGGAGCATGGGGTGCATTGCTGGGGGGATGCAAG TTTCATTGTGACATTGAGCTTGGAAAAATTGCTGCAAAGAAGCTCTTTGAAATTGAACCG GAAAATGCTGGAAATTATGTCTCGTTGTCAAACATTTATGCTAACATTGACCGATGGGGA AATGTTTCTGAAACTAGAGCTGAGATGACAGGAAGAGGGATAACGAAAATTGCAGGCTGT ACCTTGGTTTTGCAGTAG