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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0414700-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:20496054:20497009:1 gene:Os04g0414700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem I PsaO domain containing protein. (Os04t0414700-01)
Sequence

ATGGCCGCCTCCACCGTCTCCGGCCTCGCCGGCGCCACCCTCGCCCGCCGGCCGGCCTTC
TCCACCGGCTTCACGACGGGCGCCCGGGTGTCGGCGAGGAACCCGCTGCTGACGAGGAAC
CTGGAGAGGAACGGCAGGATCACCTGCATGACGTTTCCGCAGGACTGGCTTAGGAGGGAC
CTGAACGTGATCGGGTTCGGGCTGATCGGGTGGATCGCGCCGTCGAGCGTCCCGGCGATC
AACGGCAACAGCCTCACGGGGCTCTTCTTCTCCAGCATCGGCCAGGAGCTCTCCCACTTC
CCCTCGCCGCCGGCGCTCGACTCGCCGTTCTGGCTGTGGTTGGTGACGTGGCACCTTGGG
CTGTTCCTGGCGCTCACCTTCGGCCAGATCGGGTTCAAGGGCAGGACCGAGGGCTACTTC
GACAAGTGA

Peptide Sequence

PEP ID

Os04t0414700-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:20496054:20497009:1 gene:Os04g0414700 transcript:Os04t0414700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem I PsaO domain containing protein. (Os04t0414700-01)
Sequence

MAASTVSGLAGATLARRPAFSTGFTTGARVSARNPLLTRNLERNGRITCMTFPQDWLRRD
LNVIGFGLIGWIAPSSVPAINGNSLTGLFFSSIGQELSHFPSPPALDSPFWLWLVTWHLG
LFLALTFGQIGFKGRTEGYFDK

Transcript Sequence

Transcript ID

Os04t0414700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:20496054:20497009:1 gene:Os04g0414700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Photosystem I PsaO domain containing protein. (Os04t0414700-01)
Sequence

AACCACGGAGACAACACACGCAGCTCGCCGACCAGAGACAGAGAGAGACCATCTGCTAGC
TTAGCTGCCATGGCCGCCTCCACCGTCTCCGGCCTCGCCGGCGCCACCCTCGCCCGCCGG
CCGGCCTTCTCCACCGGCTTCACGACGGGCGCCCGGGTGTCGGCGAGGAACCCGCTGCTG
ACGAGGAACCTGGAGAGGAACGGCAGGATCACCTGCATGACGTTTCCGCAGGACTGGCTT
AGGAGGGACCTGAACGTGATCGGGTTCGGGCTGATCGGGTGGATCGCGCCGTCGAGCGTC
CCGGCGATCAACGGCAACAGCCTCACGGGGCTCTTCTTCTCCAGCATCGGCCAGGAGCTC
TCCCACTTCCCCTCGCCGCCGGCGCTCGACTCGCCGTTCTGGCTGTGGTTGGTGACGTGG
CACCTTGGGCTGTTCCTGGCGCTCACCTTCGGCCAGATCGGGTTCAAGGGCAGGACCGAG
GGCTACTTCGACAAGTGAATGAATCCACAGTGGCTTTTGGTTAGCTTGACTGTACGGACG
GATGTGTGCGCTGCATATCCTTCCTTTTGTATAGGGCTCTGATTTGATCCTCTTGCGGAT
GTACGCTGTTGTAATTCTCCTCAACTCCTTAAAACTTTAAAGGAC