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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0414300-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:20484148:20485191:1 gene:Os04g0414300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0622F05.1 protein. (Os04t0414300-00)
Sequence

ATGGCGATGGCGGCGCTGCGTGAGGCCTCCCGCCGTCTGGTCTCCAGGAGGGAGTCCCCG
GCGGCCTACGCGCGCCCCTTCCTCCTCACGCACTCCCGGGGCATCACCTACAGGCTCTTC
ATCGGAGGGCTGTCCCAATTCGCGACCGAGGATAGCCTGGCAGAAGCTTTCTCTCAGTAT
GGCCAGGTACTAGAAGCAACAATTGTCACCGATAAGATGACCAACAGACCAAAAGGATTC
GGCTTTGTGAAATTTGCCTCCGAAGAAGCCGCCAATAAAGCAAAGGAAGAGATGAACGGC
AAGGCATTGAACGGCCGAGTTATCTATGTCGACATTGCGAAGGCCAAAATGAATCGTACT
ACAGATTCCAGTCCAAGAGCGACAGGTCCTCCTAAGCCACCTGACCGCTGTTGA

Peptide Sequence

PEP ID

Os04t0414300-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:20484148:20485191:1 gene:Os04g0414300 transcript:Os04t0414300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0622F05.1 protein. (Os04t0414300-00)
Sequence

MAMAALREASRRLVSRRESPAAYARPFLLTHSRGITYRLFIGGLSQFATEDSLAEAFSQY
GQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEEMNGKALNGRVIYVDIAKAKMNRT
TDSSPRATGPPKPPDRC

Transcript Sequence

Transcript ID

Os04t0414300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:20484148:20485191:1 gene:Os04g0414300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0622F05.1 protein. (Os04t0414300-00)
Sequence

GTCCCCTCCACACTCTCATCGCGTGCTTCCTGCGCTCACTCTCTTCTGGAAGAGCTTATT
CCCGGCGCGACCATGGCGATGGCGGCGCTGCGTGAGGCCTCCCGCCGTCTGGTCTCCAGG
AGGGAGTCCCCGGCGGCCTACGCGCGCCCCTTCCTCCTCACGCACTCCCGGGGCATCACC
TACAGGCTCTTCATCGGAGGGCTGTCCCAATTCGCGACCGAGGATAGCCTGGCAGAAGCT
TTCTCTCAGTATGGCCAGGTACTAGAAGCAACAATTGTCACCGATAAGATGACCAACAGA
CCAAAAGGATTCGGCTTTGTGAAATTTGCCTCCGAAGAAGCCGCCAATAAAGCAAAGGAA
GAGATGAACGGCAAGGCATTGAACGGCCGAGTTATCTATGTCGACATTGCGAAGGCCAAA
ATGAATCGTACTACAGATTCCAGTCCAAGAGCGACAGGTCCTCCTAAGCCACCTGACCGC
TGTTGA