Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0413500-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:20422171:20426921:1 gene:Os04g0413500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAIN INCOMPLETE FILLING 1 description:Cell-wall invertase, Carbon partitioning during early grain filling (Os04t0413500-01)
Sequence	ATGGGAGTTCTTGGTAGTAGGGTCGCTTGGGCATGGCTGGTCCAGCTGCTGCTGCTCCAG CAGCTCGCCGGAGCGTCGCACGTCGTCTACGACGACCTCGAGCTGCAGGCGGCTGCTACC ACAGCGGACGGCGTGCCGCCGTCCATCGTCGACTCTGAGCTCCGGACTGGGTATCACTTC CAGCCACCCAAGAACTGGATCAATGATCCGAACGCGCCGATGTACTACAAGGGGTGGTAC CATCTGTTCTACCAGTACAACCCCAAGGGCGCCGTGTGGGGGAACATCGTGTGGGCGCAC TCAGTGTCACGTGACCTCATCAACTGGGTGGCGCTCAAGCCGGCCATCGAGCCCAGCATC AGGGCCGACAAGTACGGCTGCTGGTCGGGGTCGGCGACGATGATGGCCGACGGGACGCCG GTGATCATGTACACCGGCGTCAACCGCCCCGACGTCAACTACCAGGTGCAGAACGTGGCG CTGCCGAGGAACGGGTCGGACCCGCTGCTGCGCGAGTGGGTGAAGCCCGGCCACAACCCG GTGATCGTGCCCGAGGGCGGCATCAACGCGACGCAGTTCCGCGACCCGACCACCGCGTGG CGCGGGGCCGACGGCCACTGGCGGCTGCTCGTCGGCAGCCTCGCGGGGCAGTCCCGCGGC GTGGCGTACGTGTACCGGAGCAGGGACTTCCGGCGGTGGACGCGCGCGGCGCAGCCGCTG CACTCGGCGCCCACGGGGATGTGGGAGTGCCCGGACTTCTACCCGGTCACCGCGGACGGC CGCCGCGAGGGCGTCGACACCTCGTCCGCCGTCGTCGACGCCGCCGCCTCGGCGCGCGTC AAGTACGTGCTCAAGAACAGCCTCGACCTGCGCCGGTACGACTACTACACCGTCGGAACG TACGACCGGAAGGCCGAGCGGTACGTGCCGGACGACCCCGCCGGCGACGAGCACCACATC CGCTACGACTACGGCAACTTCTACGCCTCCAAGACGTTCTACGACCCGGCGAAGCGCCGC CGCATCCTCTGGGGATGGGCCAACGAGTCCGACACCGCCGCCGACGACGTGGCCAAGGGC TGGGCCGGAATCCAGGCGATTCCGAGGAAAGTGTGGCTGGACCCAAGTGGGAAGCAACTG TTGCAGTGGCCAATCGAGGAGGTCGAGAGGCTGAGAGGGAAGTGGCCGGTCATTCTCAAG GACAGGGTGGTCAAGCCAGGGGAACACGTCGAGGTGACCGGGCTACAAACTGCACAGGCT GACGTGGAGGTGAGCTTCGAGGTGGGGAGCCTGGAGGCGGCGGAGCGGCTGGACCCGGCG ATGGCGTACGACGCGCAGCGGCTGTGCAGCGCGCGGGGCGCCGACGCGAGGGGCGGCGTG GGGCCGTTCGGCCTGTGGGTGCTCGCGTCCGCGGGGCTGGAGGAGAAGACCGCCGTGTTC TTCAGGGTGTTCAGGCCGGCGGCGCGCGGCGGCGGCGCCGGCAAGCCCGTCGTGCTCATG TGCACCGACCCCACCAAGTCATCGCGCAACCCGAACATGTACCAGCCGACGTTTGCAGGG TTCGTTGACACGGACATCACCAACGGGAAGATATCTCTGAGGAGCCTGATCGACAGGTCG GTTGTTGAGAGCTTCGGGGCTGGAGGAAAGGCGTGCATCCTGTCGAGGGTGTACCCGTCG CTGGCCATCGGCAAGAACGCGCGCCTTTACGTTTTCAATAACGGGAAGGCGGAGATCAAG GTGTCGCAGCTCACCGCGTGGGAGATGAAGAAGCCGGTCATGATGAATGGAGCCTAA

Peptide Sequence

PEP ID	Os04t0413500-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:20422171:20426921:1 gene:Os04g0413500 transcript:Os04t0413500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAIN INCOMPLETE FILLING 1 description:Cell-wall invertase, Carbon partitioning during early grain filling (Os04t0413500-01)
Sequence	MGVLGSRVAWAWLVQLLLLQQLAGASHVVYDDLELQAAATTADGVPPSIVDSELRTGYHF QPPKNWINDPNAPMYYKGWYHLFYQYNPKGAVWGNIVWAHSVSRDLINWVALKPAIEPSI RADKYGCWSGSATMMADGTPVIMYTGVNRPDVNYQVQNVALPRNGSDPLLREWVKPGHNP VIVPEGGINATQFRDPTTAWRGADGHWRLLVGSLAGQSRGVAYVYRSRDFRRWTRAAQPL HSAPTGMWECPDFYPVTADGRREGVDTSSAVVDAAASARVKYVLKNSLDLRRYDYYTVGT YDRKAERYVPDDPAGDEHHIRYDYGNFYASKTFYDPAKRRRILWGWANESDTAADDVAKG WAGIQAIPRKVWLDPSGKQLLQWPIEEVERLRGKWPVILKDRVVKPGEHVEVTGLQTAQA DVEVSFEVGSLEAAERLDPAMAYDAQRLCSARGADARGGVGPFGLWVLASAGLEEKTAVF FRVFRPAARGGGAGKPVVLMCTDPTKSSRNPNMYQPTFAGFVDTDITNGKISLRSLIDRS VVESFGAGGKACILSRVYPSLAIGKNARLYVFNNGKAEIKVSQLTAWEMKKPVMMNGA

Transcript Sequence

Transcript ID	Os04t0413500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:20422171:20426921:1 gene:Os04g0413500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GRAIN INCOMPLETE FILLING 1 description:Cell-wall invertase, Carbon partitioning during early grain filling (Os04t0413500-01)
Sequence	ATCCTCCTCTCCTCTTCTCGCTCTCACTTCTTGTGCCCAAGTGTGAGAGCAATGGGAGTT CTTGGTAGTAGGGTCGCTTGGGCATGGCTGGTCCAGCTGCTGCTGCTCCAGCAGCTCGCC GGAGCGTCGCACGTCGTCTACGACGACCTCGAGCTGCAGGCGGCTGCTACCACAGCGGAC GGCGTGCCGCCGTCCATCGTCGACTCTGAGCTCCGGACTGGGTATCACTTCCAGCCACCC AAGAACTGGATCAATGATCCGAACGCGCCGATGTACTACAAGGGGTGGTACCATCTGTTC TACCAGTACAACCCCAAGGGCGCCGTGTGGGGGAACATCGTGTGGGCGCACTCAGTGTCA CGTGACCTCATCAACTGGGTGGCGCTCAAGCCGGCCATCGAGCCCAGCATCAGGGCCGAC AAGTACGGCTGCTGGTCGGGGTCGGCGACGATGATGGCCGACGGGACGCCGGTGATCATG TACACCGGCGTCAACCGCCCCGACGTCAACTACCAGGTGCAGAACGTGGCGCTGCCGAGG AACGGGTCGGACCCGCTGCTGCGCGAGTGGGTGAAGCCCGGCCACAACCCGGTGATCGTG CCCGAGGGCGGCATCAACGCGACGCAGTTCCGCGACCCGACCACCGCGTGGCGCGGGGCC GACGGCCACTGGCGGCTGCTCGTCGGCAGCCTCGCGGGGCAGTCCCGCGGCGTGGCGTAC GTGTACCGGAGCAGGGACTTCCGGCGGTGGACGCGCGCGGCGCAGCCGCTGCACTCGGCG CCCACGGGGATGTGGGAGTGCCCGGACTTCTACCCGGTCACCGCGGACGGCCGCCGCGAG GGCGTCGACACCTCGTCCGCCGTCGTCGACGCCGCCGCCTCGGCGCGCGTCAAGTACGTG CTCAAGAACAGCCTCGACCTGCGCCGGTACGACTACTACACCGTCGGAACGTACGACCGG AAGGCCGAGCGGTACGTGCCGGACGACCCCGCCGGCGACGAGCACCACATCCGCTACGAC TACGGCAACTTCTACGCCTCCAAGACGTTCTACGACCCGGCGAAGCGCCGCCGCATCCTC TGGGGATGGGCCAACGAGTCCGACACCGCCGCCGACGACGTGGCCAAGGGCTGGGCCGGA ATCCAGGCGATTCCGAGGAAAGTGTGGCTGGACCCAAGTGGGAAGCAACTGTTGCAGTGG CCAATCGAGGAGGTCGAGAGGCTGAGAGGGAAGTGGCCGGTCATTCTCAAGGACAGGGTG GTCAAGCCAGGGGAACACGTCGAGGTGACCGGGCTACAAACTGCACAGGCTGACGTGGAG GTGAGCTTCGAGGTGGGGAGCCTGGAGGCGGCGGAGCGGCTGGACCCGGCGATGGCGTAC GACGCGCAGCGGCTGTGCAGCGCGCGGGGCGCCGACGCGAGGGGCGGCGTGGGGCCGTTC GGCCTGTGGGTGCTCGCGTCCGCGGGGCTGGAGGAGAAGACCGCCGTGTTCTTCAGGGTG TTCAGGCCGGCGGCGCGCGGCGGCGGCGCCGGCAAGCCCGTCGTGCTCATGTGCACCGAC CCCACCAAGTCATCGCGCAACCCGAACATGTACCAGCCGACGTTTGCAGGGTTCGTTGAC ACGGACATCACCAACGGGAAGATATCTCTGAGGAGCCTGATCGACAGGTCGGTTGTTGAG AGCTTCGGGGCTGGAGGAAAGGCGTGCATCCTGTCGAGGGTGTACCCGTCGCTGGCCATC GGCAAGAACGCGCGCCTTTACGTTTTCAATAACGGGAAGGCGGAGATCAAGGTGTCGCAG CTCACCGCGTGGGAGATGAAGAAGCCGGTCATGATGAATGGAGCCTAAACAATATTTGAA ATTGAGAGAGATAGATGCAATGCATGATGAGAACTACCTTCAGTAGCTAGCTAGATTTTT GAGTTTCAGCGGAAAAGAAAAAACTGATTGCCCTTAATTATGTGCTAAATCATGCCCCCT TGTGTAAAATGGTTTCAGTCACACGTGTCGTATGCATATGTACCAAGGGGACAGTTTGAA TGCATGGATGCCATTAGGACTAATAAAGATTGATGCTAGTATAACCC