Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0412900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:20398097:20405746:1 gene:Os04g0412900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, Sec23/Sec24-type domain containing protein. (Os04t0412900-01)
Sequence	ATGGCGGTGCGCGCGAGCCTCGCCTGCTTCCCCTCCGACGCGGCACTCCAGGAGTCCTCG GGCATCCCGTGGGGCGTCGCCGTGACGCCCTTCTCCGCCGCCGACGAGCGCGGCGCGGCG CCCGCCACCGGCGCCGAGGGCCACCTCCTCCCGCGCTGCGACTCCTGCTACGCCTACTTT AGCACCCTCTGCCCGCTCCACCGCTGGTCGTGGTCCTGCGCCATCTGCTCCGCCGACAAC GACCTCACCCCCGACGCCTCCGCGCGGTACGCCCGCGACGGCGGCCAGGACCCGCCCGAG ATGCGCTCCGCCTTCGTGGACCTCCTCCTCCCTGGGGAAGAGGGAGAGGCGGCGACGACG ACGCCAGTGTACGTGGCGGCAATCGACTTGTCCTCTTCGGAGGAGTTCTTGGAGCTAGTC AAAAGTGCTCTCCTAGCAGCTCTTGAAGCTATCCCTCCAGGATCATTGTTTGGGCTTTTG ACATTTAGCAGCAAGATAGGTTTATATGATGTTCAAGGTCCGATACCGATTGTGAAGAAT GCTTTCATCCCTCCTGATTCTGATGGTACCTTACTTGTCGACCTTGAAGATGTCATGCCG CTTCGTTCCTTTTTGGCTCCTGTCGACGGGTGCAAAGATCGCATTGCTGAAGCACTTGAA ACAATTAAACCAACATCTTCCTGGGAAATAACAGCAACTGCCTCAGAAGTCCAGGATCAC GCGTTGCATCATGCCCGCGGTTTTGGGTTAGCAATGGATGCTGTTGTCAACTACCTATGT ACAGAGTACGGAAGTTTGTTTGAACTTGCAAGGATATTCACATTTTTGTCTGGTCCACCG AATTACGGGCCTGGCCAAATAGAAACAAGAAGTGACGTGGACCATAATGCTGCTAAAATG CTGGGATCCGACCATACATTCATTTCCGAGCAGACAAATTTCTACACAAATCTGGCTGCT AGTGCTGTTCAAGCAGGTGTATGTGTGGACCTTTTTGCAATTACAAATGAATACACAGAT CTTTCTTCCTTGAAAGTTCTTAGTGTTGAGAGCGGTGGCTCATTGTACATGTATTCAAGT ACAGATGAATCAACACTTCCGCAAGATATATACAAAATGCTAAGCCGTCCTTATGCTTTC GGATGTGTGCTGCGTTTGAGAACATCTTCAGAGTTCAAGATTGCTGATTCTTATGGCCAT TTCTTTCCGGATCCTCAATACATGCATGTTCAGCACATAAATTGTTGTGACTCATTTGCT ACCTACGTCTATGACTTTGAGTTTCAAAAGGATTCTCAGTTTTCCAGGAAGTCAAGCCCT CCTATACTTCAAATTGCATTCAAGTACACAACGATTGTGCAACAGGGTGATACTTCTGAT GATGTCTCAAATTCTGTCAGCAGATCAAAGTTCACCTTGCAAAGGCGGCTAAGAGTGCGG ACTATCCAGTACAACATAACTGCTAATATCTGGGACCTGTATGATTTTGTTGATCCAGAT GTTGTATTGACTATACTAGTACACCAGGTTATTTTGGCTTCGTTAAGTGATGTGCTAGAG GCAAGGATATGGCTCCGTGATTGGTTGGTGAATTTCATTGCCCAGTACAACAAGGCATAC AAGGTCGTTAGATCTGGTGGAACTGGAATGTCTGATATTGATGTTGATTTCATACACTGC TCACAACTGCAACCTCTGTCAAGACTTGTATTTGCTTTTCTATTAAGTCCACTGCTTCAG CTTCACGGTCAAGGTATTCATCCAGATTATCGGACATATTTGCAATGCCTCTTCAGTGCA CTGGAGGCATCATCGCTTCGCCAAGCTATATGTCCTACATTGATTTCATACTCTTCTCCT GATGTAGAAGCAGAAGTGCATCAGTCACTAAGTCGAAGTGTATTCAACAGTGAGAGCCCG ATATTCCTTCTTGATGCCTACACTGATCTTCTGGTGTATTACTCACCTACAGTCAGTAGC ACAATCCCCTTCCCTCCTCCACGTGACTGTCTGTTGAGATCCAAGATTGATAGATTGAAG CAAGAAAGGAATATAACCCCCAAGCTTGTCTTTATCCATGGTGCACACGATGATACTACA GCATTCGAGAGATACCTGATTGAGGATCAAAGTGTCGATGGTTCTTTGGTAGCTAGCGCC ACAGGTTTTAGATCGTTCCTTGAGGGCATCCGAAGCAGGATAGCTGAGTACAGCAGATAG

Peptide Sequence

PEP ID	Os04t0412900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:20398097:20405746:1 gene:Os04g0412900 transcript:Os04t0412900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, Sec23/Sec24-type domain containing protein. (Os04t0412900-01)
Sequence	MAVRASLACFPSDAALQESSGIPWGVAVTPFSAADERGAAPATGAEGHLLPRCDSCYAYF STLCPLHRWSWSCAICSADNDLTPDASARYARDGGQDPPEMRSAFVDLLLPGEEGEAATT TPVYVAAIDLSSSEEFLELVKSALLAALEAIPPGSLFGLLTFSSKIGLYDVQGPIPIVKN AFIPPDSDGTLLVDLEDVMPLRSFLAPVDGCKDRIAEALETIKPTSSWEITATASEVQDH ALHHARGFGLAMDAVVNYLCTEYGSLFELARIFTFLSGPPNYGPGQIETRSDVDHNAAKM LGSDHTFISEQTNFYTNLAASAVQAGVCVDLFAITNEYTDLSSLKVLSVESGGSLYMYSS TDESTLPQDIYKMLSRPYAFGCVLRLRTSSEFKIADSYGHFFPDPQYMHVQHINCCDSFA TYVYDFEFQKDSQFSRKSSPPILQIAFKYTTIVQQGDTSDDVSNSVSRSKFTLQRRLRVR TIQYNITANIWDLYDFVDPDVVLTILVHQVILASLSDVLEARIWLRDWLVNFIAQYNKAY KVVRSGGTGMSDIDVDFIHCSQLQPLSRLVFAFLLSPLLQLHGQGIHPDYRTYLQCLFSA LEASSLRQAICPTLISYSSPDVEAEVHQSLSRSVFNSESPIFLLDAYTDLLVYYSPTVSS TIPFPPPRDCLLRSKIDRLKQERNITPKLVFIHGAHDDTTAFERYLIEDQSVDGSLVASA TGFRSFLEGIRSRIAEYSR

Transcript Sequence

Transcript ID	Os04t0412900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:20398097:20405746:1 gene:Os04g0412900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, Sec23/Sec24-type domain containing protein. (Os04t0412900-01)
Sequence	ACCGTAAACTGTTACTCCACGCTGCGCTGCACGGCTTCCTCTTCCTCCCTCCTCTTCTTC TCCTCAGATCCCTCTCGCGGTCGCGGCCAACAACCACAGATCCACATCCCAAAGCTGCAG CGCGGGGGGCCGCAGCAGCCGCAGCAGCAGCAATGGCGGTGCGCGCGAGCCTCGCCTGCT TCCCCTCCGACGCGGCACTCCAGGAGTCCTCGGGCATCCCGTGGGGCGTCGCCGTGACGC CCTTCTCCGCCGCCGACGAGCGCGGCGCGGCGCCCGCCACCGGCGCCGAGGGCCACCTCC TCCCGCGCTGCGACTCCTGCTACGCCTACTTTAGCACCCTCTGCCCGCTCCACCGCTGGT CGTGGTCCTGCGCCATCTGCTCCGCCGACAACGACCTCACCCCCGACGCCTCCGCGCGGT ACGCCCGCGACGGCGGCCAGGACCCGCCCGAGATGCGCTCCGCCTTCGTGGACCTCCTCC TCCCTGGGGAAGAGGGAGAGGCGGCGACGACGACGCCAGTGTACGTGGCGGCAATCGACT TGTCCTCTTCGGAGGAGTTCTTGGAGCTAGTCAAAAGTGCTCTCCTAGCAGCTCTTGAAG CTATCCCTCCAGGATCATTGTTTGGGCTTTTGACATTTAGCAGCAAGATAGGTTTATATG ATGTTCAAGGTCCGATACCGATTGTGAAGAATGCTTTCATCCCTCCTGATTCTGATGGTA CCTTACTTGTCGACCTTGAAGATGTCATGCCGCTTCGTTCCTTTTTGGCTCCTGTCGACG GGTGCAAAGATCGCATTGCTGAAGCACTTGAAACAATTAAACCAACATCTTCCTGGGAAA TAACAGCAACTGCCTCAGAAGTCCAGGATCACGCGTTGCATCATGCCCGCGGTTTTGGGT TAGCAATGGATGCTGTTGTCAACTACCTATGTACAGAGTACGGAAGTTTGTTTGAACTTG CAAGGATATTCACATTTTTGTCTGGTCCACCGAATTACGGGCCTGGCCAAATAGAAACAA GAAGTGACGTGGACCATAATGCTGCTAAAATGCTGGGATCCGACCATACATTCATTTCCG AGCAGACAAATTTCTACACAAATCTGGCTGCTAGTGCTGTTCAAGCAGGTGTATGTGTGG ACCTTTTTGCAATTACAAATGAATACACAGATCTTTCTTCCTTGAAAGTTCTTAGTGTTG AGAGCGGTGGCTCATTGTACATGTATTCAAGTACAGATGAATCAACACTTCCGCAAGATA TATACAAAATGCTAAGCCGTCCTTATGCTTTCGGATGTGTGCTGCGTTTGAGAACATCTT CAGAGTTCAAGATTGCTGATTCTTATGGCCATTTCTTTCCGGATCCTCAATACATGCATG TTCAGCACATAAATTGTTGTGACTCATTTGCTACCTACGTCTATGACTTTGAGTTTCAAA AGGATTCTCAGTTTTCCAGGAAGTCAAGCCCTCCTATACTTCAAATTGCATTCAAGTACA CAACGATTGTGCAACAGGGTGATACTTCTGATGATGTCTCAAATTCTGTCAGCAGATCAA AGTTCACCTTGCAAAGGCGGCTAAGAGTGCGGACTATCCAGTACAACATAACTGCTAATA TCTGGGACCTGTATGATTTTGTTGATCCAGATGTTGTATTGACTATACTAGTACACCAGG TTATTTTGGCTTCGTTAAGTGATGTGCTAGAGGCAAGGATATGGCTCCGTGATTGGTTGG TGAATTTCATTGCCCAGTACAACAAGGCATACAAGGTCGTTAGATCTGGTGGAACTGGAA TGTCTGATATTGATGTTGATTTCATACACTGCTCACAACTGCAACCTCTGTCAAGACTTG TATTTGCTTTTCTATTAAGTCCACTGCTTCAGCTTCACGGTCAAGGTATTCATCCAGATT ATCGGACATATTTGCAATGCCTCTTCAGTGCACTGGAGGCATCATCGCTTCGCCAAGCTA TATGTCCTACATTGATTTCATACTCTTCTCCTGATGTAGAAGCAGAAGTGCATCAGTCAC TAAGTCGAAGTGTATTCAACAGTGAGAGCCCGATATTCCTTCTTGATGCCTACACTGATC TTCTGGTGTATTACTCACCTACAGTCAGTAGCACAATCCCCTTCCCTCCTCCACGTGACT GTCTGTTGAGATCCAAGATTGATAGATTGAAGCAAGAAAGGAATATAACCCCCAAGCTTG TCTTTATCCATGGTGCACACGATGATACTACAGCATTCGAGAGATACCTGATTGAGGATC AAAGTGTCGATGGTTCTTTGGTAGCTAGCGCCACAGGTTTTAGATCGTTCCTTGAGGGCA TCCGAAGCAGGATAGCTGAGTACAGCAGATAGGCGCCCGTTTCAGCCGTTGCTTGAGCTG CCCAGTATTCAAGGATTGATTTTTCTTGCTATCATGGATCCGCTGCTCCCTTTGCCTTGA AGCCATGTTGTTCCTCATCTGCTCTGTATCCATGGAGGTGATCTACCAGTTCTCGCGGGA CTGCTAGGGGAACCGATTTTTAAATGCATTTGTAAGTTCAGACTCTGCAATGTTTTACAA TATGAACATCCACACCGGCTGACCGGCTTTGCATGGTGGGTTGGACTGTATACTAGAGAG CATATGCATATTTGATACATGTTTGTTTAGGCGGCGATTTTGGCCGTGTACTGATGTGTT CCTCTTACATAGTACGGTTATGGTGCATGC