Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0412500-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:20388100:20390005:1 gene:Os04g0412500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-CARBONIC ANHYDRASE 2 description:Similar to OSIGBa0134P10.2 protein. (Os04t0412500-01)
Sequence

ATGGCAGCTTCTCATGGAAATGCGATCTTTGTTCTGCTGCTGTGCACTCTCTTTCTCCCG
TCCCTTGCATGTGACAGCGGTGGCGTGAAGTTTGGGTACACTGGTTCTATCGGCCCTGAC
TTCTGGGGGAATTTGAGTGCCGACTTCACGCGTTGCTCGAACGGAAAGCAGCAGTCCCCA
ATTGACATCGACACCAACAACCTGGTTCATGAACTGAATATGGAGCCACTCCATAGAAAT
TATACCGCTGCAAATGCTACTCTTGTCGACAACATCTTCAACGTCGCGCTGCGGTACGAA
GAGGCAGCAGGGGTTCTGAGCATTAACGGGGTGAAGTACACGCTGAAGCAGATGCACTGG
CACTCTCCTTCCGAGCACACCATCAACGGCTTCAGGTTCCCACTGGAGCTCCACATGGTT
CACACCAACGAAAATGGCAACATCACCGTTCTGGCCTTTCTCTACCGATTTGGCAGGCCA
GACCCGTTCTTCGAACAGATTCAGGATAAGCTGGCTGCGCTCAACGCGGAGGGCTGCAAG
GCAGAGAAAGGCAGCCCGGTCCCTGCCGGATCTGTGAGCTTGCTGACGATGAGGCAGCAC
GTGCACATATACTACAGATACGTTGGGTCACTGACCACGCCACCGTGCGCCGAGAACGTG
ATCTGGAACATCCCTGCCATGCCGAGAGAGATGACACCGCAGCAGGCCGCCGATCTGATG
GCTCCCCTGGACGAAGGCTACCGCCGGAACAGCAGGCCGACGCAGCAGATGAACGGCCGC
ACCGTGCAGCTCTACCACAGGTTCTGGGGGAAGAAGAAGAGGAGGAGCTCCCCGTAG

Peptide Sequence

PEP ID

Os04t0412500-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:20388100:20390005:1 gene:Os04g0412500 transcript:Os04t0412500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-CARBONIC ANHYDRASE 2 description:Similar to OSIGBa0134P10.2 protein. (Os04t0412500-01)
Sequence

MAASHGNAIFVLLLCTLFLPSLACDSGGVKFGYTGSIGPDFWGNLSADFTRCSNGKQQSP
IDIDTNNLVHELNMEPLHRNYTAANATLVDNIFNVALRYEEAAGVLSINGVKYTLKQMHW
HSPSEHTINGFRFPLELHMVHTNENGNITVLAFLYRFGRPDPFFEQIQDKLAALNAEGCK
AEKGSPVPAGSVSLLTMRQHVHIYYRYVGSLTTPPCAENVIWNIPAMPREMTPQQAADLM
APLDEGYRRNSRPTQQMNGRTVQLYHRFWGKKKRRSSP

Transcript Sequence

Transcript ID

Os04t0412500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:20388100:20390005:1 gene:Os04g0412500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ALPHA-CARBONIC ANHYDRASE 2 description:Similar to OSIGBa0134P10.2 protein. (Os04t0412500-01)
Sequence

AAACTACTCTCTGTTCTTGCCCTGTGGTTTCTTCTCCGTTTGCAGGCTTTATTGCATTGC
AGGAAAAGATGGCAGCTTCTCATGGAAATGCGATCTTTGTTCTGCTGCTGTGCACTCTCT
TTCTCCCGTCCCTTGCATGTGACAGCGGTGGCGTGAAGTTTGGGTACACTGGTTCTATCG
GCCCTGACTTCTGGGGGAATTTGAGTGCCGACTTCACGCGTTGCTCGAACGGAAAGCAGC
AGTCCCCAATTGACATCGACACCAACAACCTGGTTCATGAACTGAATATGGAGCCACTCC
ATAGAAATTATACCGCTGCAAATGCTACTCTTGTCGACAACATCTTCAACGTCGCGCTGC
GGTACGAAGAGGCAGCAGGGGTTCTGAGCATTAACGGGGTGAAGTACACGCTGAAGCAGA
TGCACTGGCACTCTCCTTCCGAGCACACCATCAACGGCTTCAGGTTCCCACTGGAGCTCC
ACATGGTTCACACCAACGAAAATGGCAACATCACCGTTCTGGCCTTTCTCTACCGATTTG
GCAGGCCAGACCCGTTCTTCGAACAGATTCAGGATAAGCTGGCTGCGCTCAACGCGGAGG
GCTGCAAGGCAGAGAAAGGCAGCCCGGTCCCTGCCGGATCTGTGAGCTTGCTGACGATGA
GGCAGCACGTGCACATATACTACAGATACGTTGGGTCACTGACCACGCCACCGTGCGCCG
AGAACGTGATCTGGAACATCCCTGCCATGCCGAGAGAGATGACACCGCAGCAGGCCGCCG
ATCTGATGGCTCCCCTGGACGAAGGCTACCGCCGGAACAGCAGGCCGACGCAGCAGATGA
ACGGCCGCACCGTGCAGCTCTACCACAGGTTCTGGGGGAAGAAGAAGAGGAGGAGCTCCC
CGTAGGCTGACGACGACGACGTACGACGACGCGCTGGCAGCGCCATCGATCCATTCCGGC
CGATGGAGATCGCTGCGTGTTTTGGGGTCCCTTGTGTTGTGTTCTGTCCAGCAGTAGTAG
TTTGTTTCTGAAGTCGTGTGTTTATAGCGTCTAGGTTTGCTTTCTTATTTTGGTTACCGG
CCATAGTTTGCCCCGGTTTTGCTAGCAGTCTTGAACTGGCTTTGATTTCTGTACTAAGAG
ACCGGTCTTTTGTCACCCTCTTTAATTACCTACTAATGAAGAACTACTGAGTTCTCAAC