Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0412300-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:20372912:20376750:1 gene:Os04g0412300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0717B12.10 protein. (Os04t0412300-01);Glycoside hydrolase, family 17 protein. (Os04t0412300-02)
Sequence	ATGGCGGCAGGGGAGCAACCGGGAACTGGGTCGCCGCCGCAGCCGTCGACCCGCCTCTTC CTCCTCGTCCTCGCAGTCATCCTCACAGATCAAGTGCTAGCGGCATCAGCTCAAGGCATG TCAATCGGGATCAACTACGGGCAGATCGCGGACAACCTCCCTTCTCCGACCAGGGTCTCG GGTCTCCTCCGGTCAATGCAGATCAGCAAGGTGAAGCTCTACGACGCCGACCAGAACGTC CTGAGCGCGTTCCTCGACACGGGCGTGGAGTTCGTCGTCGGCATCGGCAACGAGAACGTG TCGGCGATGGTGGACCCGGCGGCGGCGCAGGCGTGGGTGCAGCAGCACGTCCGCCCCTAC CTCCCGAGCGCGCGCATCACCTGCATCACCGTCGGGAACGAGGTGTTCAAGGGCAACGAC ACCGCGCTCAAGGCCAACCTCCTGCCGGCGATGCAGTCCGTGTACAACGCCGTCGTCGCG CTCGGGCTGCAGGGCCAGGTGAACGTCACGACGGCGCACTCCCTGGACATCATGGGCAGC TCCTACCCTCCCTCCGCCGGCGCGTTCCGGCCCGACGCCGTGCCGTACATCCAGCCGCTG CTCAACTTCCTGTCCATGGCGGGGTCCCCGTTCCTGATCAACTGCTACCCGTACTTCGCC TACAAGGCCGACCCGGGCAGCGTGCCGCTGGAGTACGTCCTCTTCCAGCCCAACGCCGGC GTGACCGACCCAAACACGAAGCTCAACTACGACAACATGCTGTACGCCCAGATCGACTCA GTGTACGCCGCGATGCAGGCGCTGGGCCACACCGACGTCGACGTGAAGATCTCCGAGACC GGGTGGCCGTCCAGGGGCGACCCCGACGAGGCCGGCGCGACGCCGGAGTACGCCGGGATC TACATCGGCAACCTCCTGCGGAGGATCGAGATGAAGCAGGGGACGCCGCTGAGGCCGTCG TCGCCCATCGACGTCTACGTCTTTGCGCTGTTCAACGAGAACCTCAAGCCGGGGCCGGCA TCCGAGCGGAACTACGGGCTGTTCTACCCCGACGGCACGCCGGTCTACGACGTCGGCCTG CGCGGGTATCTCCCGCCGATGGACGAATCGAAAAGCGCGCGAAAGGTAGGCGGTGTGAAC TGTGAACTCGATCGTTTTTTTCTCCTTCAAAATCTGCAAAACTGTTACAAACTTTCTGCT GCATGTCACGCATCATATAGAT

Peptide Sequence

PEP ID	Os04t0412300-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:20372912:20376750:1 gene:Os04g0412300 transcript:Os04t0412300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0717B12.10 protein. (Os04t0412300-01);Glycoside hydrolase, family 17 protein. (Os04t0412300-02)
Sequence	MAAGEQPGTGSPPQPSTRLFLLVLAVILTDQVLAASAQGMSIGINYGQIADNLPSPTRVS GLLRSMQISKVKLYDADQNVLSAFLDTGVEFVVGIGNENVSAMVDPAAAQAWVQQHVRPY LPSARITCITVGNEVFKGNDTALKANLLPAMQSVYNAVVALGLQGQVNVTTAHSLDIMGS SYPPSAGAFRPDAVPYIQPLLNFLSMAGSPFLINCYPYFAYKADPGSVPLEYVLFQPNAG VTDPNTKLNYDNMLYAQIDSVYAAMQALGHTDVDVKISETGWPSRGDPDEAGATPEYAGI YIGNLLRRIEMKQGTPLRPSSPIDVYVFALFNENLKPGPASERNYGLFYPDGTPVYDVGL RGYLPPMDESKSARKVGGVNCELDRFFLLQNLQNCYKLSAACHASYR

Transcript Sequence

Transcript ID	Os04t0412300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:20372912:20376750:1 gene:Os04g0412300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0717B12.10 protein. (Os04t0412300-01);Glycoside hydrolase, family 17 protein. (Os04t0412300-02)
Sequence	CAGTCACTCCCCGATCCATCCAAATTCCAAGACAAGCTCCTCGTGCTTTCCTGCCTTGCC GCTGCGTCGCTCTCGCTCTCCACGGCACGCGCACGCAACGCGCGACGCGGTCCGGCGCTA GCTGAGCTGTGACTAGCCGAGCAAACACCCGCGGCTCGCCACCCCGACGGTTACCGCCGC GCGCCACCCCCCACCCGCACTGCATAAAAACGCCCCACCTCCGCCGAATCGCCGATCCGC GCGCTGCTACCACCACAAACATTCTACCGCGGGACACACACTCGTCTTTACCACACAACA CGAGCACGCGCGCGAGAGAGAAAGGGGGAGATAAGAGCAGTTTGACTTCGAGCTTCAACC ACAGCCGAGTGATCCATGGCGGCAGGGGAGCAACCGGGAACTGGGTCGCCGCCGCAGCCG TCGACCCGCCTCTTCCTCCTCGTCCTCGCAGTCATCCTCACAGATCAAGTGCTAGCGGCA TCAGCTCAAGGCATGTCAATCGGGATCAACTACGGGCAGATCGCGGACAACCTCCCTTCT CCGACCAGGGTCTCGGGTCTCCTCCGGTCAATGCAGATCAGCAAGGTGAAGCTCTACGAC GCCGACCAGAACGTCCTGAGCGCGTTCCTCGACACGGGCGTGGAGTTCGTCGTCGGCATC GGCAACGAGAACGTGTCGGCGATGGTGGACCCGGCGGCGGCGCAGGCGTGGGTGCAGCAG CACGTCCGCCCCTACCTCCCGAGCGCGCGCATCACCTGCATCACCGTCGGGAACGAGGTG TTCAAGGGCAACGACACCGCGCTCAAGGCCAACCTCCTGCCGGCGATGCAGTCCGTGTAC AACGCCGTCGTCGCGCTCGGGCTGCAGGGCCAGGTGAACGTCACGACGGCGCACTCCCTG GACATCATGGGCAGCTCCTACCCTCCCTCCGCCGGCGCGTTCCGGCCCGACGCCGTGCCG TACATCCAGCCGCTGCTCAACTTCCTGTCCATGGCGGGGTCCCCGTTCCTGATCAACTGC TACCCGTACTTCGCCTACAAGGCCGACCCGGGCAGCGTGCCGCTGGAGTACGTCCTCTTC CAGCCCAACGCCGGCGTGACCGACCCAAACACGAAGCTCAACTACGACAACATGCTGTAC GCCCAGATCGACTCAGTGTACGCCGCGATGCAGGCGCTGGGCCACACCGACGTCGACGTG AAGATCTCCGAGACCGGGTGGCCGTCCAGGGGCGACCCCGACGAGGCCGGCGCGACGCCG GAGTACGCCGGGATCTACATCGGCAACCTCCTGCGGAGGATCGAGATGAAGCAGGGGACG CCGCTGAGGCCGTCGTCGCCCATCGACGTCTACGTCTTTGCGCTGTTCAACGAGAACCTC AAGCCGGGGCCGGCATCCGAGCGGAACTACGGGCTGTTCTACCCCGACGGCACGCCGGTC TACGACGTCGGCCTGCGCGGGTATCTCCCGCCGATGGACGAATCGAAAAGCGCGCGAAAG GTAGGCGGTGTGAACTGTGAACTCGATCGTTTTTTTCTCCTTCAAAATCTGCAAAACTGT TACAAACTTTCTGCTGCATGTCACGCATCATATAGAT