Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0410300-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:20276163:20279226:1 gene:Os04g0410300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0717B12.1 protein. (Os04t0410300-01)
Sequence

ATGGATGTCGATAAGCAGGAAACGATGGAAGAGACCATTCTTGTTGGTGATGATCTCATG
CGTGGGTTGCCATCCCCTGTCATACCAAAGGAAATTGCTTCACATGTCCTTGACGGTGTT
GAGATTTGTGATGGCATACTCAAAAATCTTTTCTTATGTCTGCAAATCAATGATATTGAG
CCGTTTTGCCAAGATGAAATTGTACTATACCGACAATGTGCTGAGAAAAGGGACAAGGAA
ATAAGAGAGCGGCTGCAGGATAGTGAATATAAGCTGGGTTTTTCAATGCCCCTGGAAGAA
GCTAAGGAAAGAGCTACCCAACTCCAATCAGAAATCACACTGCTTGAAAGGCGCATGATT
CTTGCTAGTGGACTTGAGGGCATGGAAGGATTTCGCCAAAGATGGAGCTTACATGGACAG
CTTGGAGACACAAGGAAAAGGTTGGAAGCGCTGAACAGTGGAATCGTAAAAAGAGGGAGC
CAAAGTTCTCCAGTGCAAGAGACAACTCCTGCAGTCAGGAAGAGGTGGTTCCTTTGGTAG

Peptide Sequence

PEP ID

Os04t0410300-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:20276163:20279226:1 gene:Os04g0410300 transcript:Os04t0410300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0717B12.1 protein. (Os04t0410300-01)
Sequence

MDVDKQETMEETILVGDDLMRGLPSPVIPKEIASHVLDGVEICDGILKNLFLCLQINDIE
PFCQDEIVLYRQCAEKRDKEIRERLQDSEYKLGFSMPLEEAKERATQLQSEITLLERRMI
LASGLEGMEGFRQRWSLHGQLGDTRKRLEALNSGIVKRGSQSSPVQETTPAVRKRWFLW

Transcript Sequence

Transcript ID

Os04t0410300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:20276163:20279226:1 gene:Os04g0410300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0717B12.1 protein. (Os04t0410300-01)
Sequence

AAACCCTCTCTCCTCCTCCGGTCTCCTTCCTCCCCTTCACCTCCGCGGCGCGCCGTCGGT
CGCCGCTCGCCGCCGCCTTCTGGTTCTTCTCCGGTCTATTTCCCCGCGGGATTCGTCGCG
GACACTCCGGTTGGTTGGTGTATCTAAGTCGGTTCGAGTTGCCAAAATCTGATTGTTCTC
CGGAGGTGAAGGTTTACTAGGCAATCATGGATGTCGATAAGCAGGAAACGATGGAAGAGA
CCATTCTTGTTGGTGATGATCTCATGCGTGGGTTGCCATCCCCTGTCATACCAAAGGAAA
TTGCTTCACATGTCCTTGACGGTGTTGAGATTTGTGATGGCATACTCAAAAATCTTTTCT
TATGTCTGCAAATCAATGATATTGAGCCGTTTTGCCAAGATGAAATTGTACTATACCGAC
AATGTGCTGAGAAAAGGGACAAGGAAATAAGAGAGCGGCTGCAGGATAGTGAATATAAGC
TGGGTTTTTCAATGCCCCTGGAAGAAGCTAAGGAAAGAGCTACCCAACTCCAATCAGAAA
TCACACTGCTTGAAAGGCGCATGATTCTTGCTAGTGGACTTGAGGGCATGGAAGGATTTC
GCCAAAGATGGAGCTTACATGGACAGCTTGGAGACACAAGGAAAAGGTTGGAAGCGCTGA
ACAGTGGAATCGTAAAAAGAGGGAGCCAAAGTTCTCCAGTGCAAGAGACAACTCCTGCAG
TCAGGAAGAGGTGGTTCCTTTGGTAGGTTAGTTTTCGTTTTCTGATTTGCAAACCAGTGT
AGCATATGGTATATTATTGGCCATGGGCATGCACTCGTTCCTTTCCACAGTATGCTGTCT
CCAAACCAACAATCGCACCTGCTAACCAGTACAATTTGCATTTATAC