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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0405500-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:20120596:20122056:-1 gene:Os04g0405500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0405500-01)
Sequence

TCGCGTAGGCGTATCCAAGATCCGGTGGTGCGGAGCTTTGCTTGCGGGGCCTCGGCGGCT
GGCGGGCTCAAGAGGAGCAAGTCGGTGGCGCCGCGTCCGGAGGAGACGACGCCGGTGACG
GCGCCCGCTCCGTCCGCGGTCACCGCGGACAGCCCGAGGAAGAAGAGCTTCTGGTCCTTC
CTCTACTCCTCGTCCTCGTCGTCGAGCGGCGGCCACCAGGGCTCGGCGTCGATGGCCAAC
GGTGGCGGCGGCGGCGGCGCGTCGGTGAGGAGGAAGTCGGTGTCGGTGGCCTCGGCGTCG
TCGGCGTCGCTGGGACGGAGGCTGGAGGCGATAGTGGAGCCGGACAGCCCCGGCCGCCGT
AGCGAGGGCTCGTCGTCGTCGTCGTTCGGGAGGAAGGTGGCGCGGTCGCGCTCCGTGGGG
TGCGGCAGCCGCAGCTTCTCGGGGGACTTCCTGGAGCGCCTCTCCACCGGCTTCGGCGAC
TGCGCGCTCCGCCGCGTGGAGTCCCACCGCGAGCCCAAGCCCAAGTCGTCCGCCGGCGCG
CTCGCCCACCTGGGCGGCAACCACTCCGCCGCCGGCAACGGCGACGACGACGAGTACGAG
TCCACCCAGCAGCACCGCATCAAGTGCGCCGGGTTCTTCGGCGGTCTCGGCGCCGCGCCG
CCGCCCACGTCGTCCTCCTACTGGCTGTCCGCTGCCGACGGCGCCACCGCCGCCGCCCCC
AGCGCAAGAACCCACGGCGCGCGTAGCCACCGGAGCTGGGCGTGGGCGCTGGCGAGCCCG
ATGCGAGCGCTGAGGCCGACGAGCTCCTCCTCCAGCAAATCCATCATGGCCGCGCCCCAC
AACCGCGGCGGCGTCTCCGGCAACGGCGGCATGGCGATGGCCGCGGTGGCGACGAGCTAG

Peptide Sequence

PEP ID

Os04t0405500-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:20120596:20122056:-1 gene:Os04g0405500 transcript:Os04t0405500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0405500-01)
Sequence

SRRRIQDPVVRSFACGASAAGGLKRSKSVAPRPEETTPVTAPAPSAVTADSPRKKSFWSF
LYSSSSSSSGGHQGSASMANGGGGGGASVRRKSVSVASASSASLGRRLEAIVEPDSPGRR
SEGSSSSSFGRKVARSRSVGCGSRSFSGDFLERLSTGFGDCALRRVESHREPKPKSSAGA
LAHLGGNHSAAGNGDDDEYESTQQHRIKCAGFFGGLGAAPPPTSSSYWLSAADGATAAAP
SARTHGARSHRSWAWALASPMRALRPTSSSSSKSIMAAPHNRGGVSGNGGMAMAAVATS

Transcript Sequence

Transcript ID

Os04t0405500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:20120596:20122056:-1 gene:Os04g0405500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0405500-01)
Sequence

GTCGCGTAGGCGTATCCAAGATCCGGTGGTGCGGAGCTTTGCTTGCGGGGCCTCGGCGGC
TGGCGGGCTCAAGAGGAGCAAGTCGGTGGCGCCGCGTCCGGAGGAGACGACGCCGGTGAC
GGCGCCCGCTCCGTCCGCGGTCACCGCGGACAGCCCGAGGAAGAAGAGCTTCTGGTCCTT
CCTCTACTCCTCGTCCTCGTCGTCGAGCGGCGGCCACCAGGGCTCGGCGTCGATGGCCAA
CGGTGGCGGCGGCGGCGGCGCGTCGGTGAGGAGGAAGTCGGTGTCGGTGGCCTCGGCGTC
GTCGGCGTCGCTGGGACGGAGGCTGGAGGCGATAGTGGAGCCGGACAGCCCCGGCCGCCG
TAGCGAGGGCTCGTCGTCGTCGTCGTTCGGGAGGAAGGTGGCGCGGTCGCGCTCCGTGGG
GTGCGGCAGCCGCAGCTTCTCGGGGGACTTCCTGGAGCGCCTCTCCACCGGCTTCGGCGA
CTGCGCGCTCCGCCGCGTGGAGTCCCACCGCGAGCCCAAGCCCAAGTCGTCCGCCGGCGC
GCTCGCCCACCTGGGCGGCAACCACTCCGCCGCCGGCAACGGCGACGACGACGAGTACGA
GTCCACCCAGCAGCACCGCATCAAGTGCGCCGGGTTCTTCGGCGGTCTCGGCGCCGCGCC
GCCGCCCACGTCGTCCTCCTACTGGCTGTCCGCTGCCGACGGCGCCACCGCCGCCGCCCC
CAGCGCAAGAACCCACGGCGCGCGTAGCCACCGGAGCTGGGCGTGGGCGCTGGCGAGCCC
GATGCGAGCGCTGAGGCCGACGAGCTCCTCCTCCAGCAAATCCATCATGGCCGCGCCCCA
CAACCGCGGCGGCGTCTCCGGCAACGGCGGCATGGCGATGGCCGCGGTGGCGACGAGCTA
GCCATCCAACATGCAACAAACACCACCGCACACAAGTCACATCCGGCATGGTCGGTCGAT
GGCCACCCGAACTACACTCCTCCATAATTTCTTTATTTATTTCGCGCGTGTTGTTATGTG
ATGTCCATGGTTAAACCCTGCTATGATATGAAATCAATCGATCTCCAGATGAACTTGACC
TTGATTTGTT