Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0405300-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:20109577:20110741:-1 gene:Os04g0405300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:short-chain alcohol dehydrogenase/reductase 110C-MS3, OsSDR110C family member MS3 description:Similar to Stem secoisolariciresinol dehydrogenase (Fragment). (Os04t0405300-01)
Sequence	ATGGCGGGTAGCAGCTACGGCGACGTTCATGAGTCTGCAAGAAAGTTGGTGGGCAAGGTG GCGCTGATCACCGGCGGCGCGAGCGGCATCGGGGAGTGCACGGCGCGGCTGTTCGTGAAG CACGGGGCGCAAGTCGTGGTCGCCGACATCCAGGACGAGGCGGGGGCGCGACTGTGCGCC GAGCTCGGGAGCGCCACCGCCAGCTACGTGCGGTGCGACGTGACGAGCGAGGACGACGTC GCGGCCGCGGTGGACCACGCCGTGGCGAGGTACGGGAAGCTGGACGTCATGTTCAACAAC GCCGGGATCGGCGGCGCGGCGTGCCACAGCATCCTGGAGAGCACCAAGGCCGACTTTGAC CGCGTGCTGGCCGTGAACCTGACGGGCCCGTTCCTGGGCACGAAGCACGCGGCGCGGGTG ATGGTGGCCGCGGGGCGCGGCGGGTGCATCATCGGGACGGCGAGCCTCGCGTCGGCGGTG GCCGGCACGGCGTCGCACGCGTACACGTGCGCCAAGCGCGCGCTGGTGGGGCTGACGGAG AACGCGGCGGCGGAGCTGGGCCGCCACGGGATCCGCGTCAACTGCGTGTCGCCCGCCGCG GCGGCGACGCCGCTGGCCACGGGGTACGTGGGCCTGGAGGGGGAGGCGTTCGAGGCCGCC ATGGAGGCCGTGGCCAACCTCAAGGGCGTGCGCCTCCGCGTGGAGGACATCGCCGCCGCC GTGCTGTTCCTCGCCAGCGACGACGCGCGCTACGTCAGCGGCCACAACCTGCTCATCGAC GGCGGCTGCTCCATCGTCAACCCGTCCTTTGGCATCTTCAAGGACTGA

Peptide Sequence

PEP ID	Os04t0405300-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:20109577:20110741:-1 gene:Os04g0405300 transcript:Os04t0405300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:short-chain alcohol dehydrogenase/reductase 110C-MS3, OsSDR110C family member MS3 description:Similar to Stem secoisolariciresinol dehydrogenase (Fragment). (Os04t0405300-01)
Sequence	MAGSSYGDVHESARKLVGKVALITGGASGIGECTARLFVKHGAQVVVADIQDEAGARLCA ELGSATASYVRCDVTSEDDVAAAVDHAVARYGKLDVMFNNAGIGGAACHSILESTKADFD RVLAVNLTGPFLGTKHAARVMVAAGRGGCIIGTASLASAVAGTASHAYTCAKRALVGLTE NAAAELGRHGIRVNCVSPAAAATPLATGYVGLEGEAFEAAMEAVANLKGVRLRVEDIAAA VLFLASDDARYVSGHNLLIDGGCSIVNPSFGIFKD

Transcript Sequence

Transcript ID	Os04t0405300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:20109577:20110741:-1 gene:Os04g0405300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:short-chain alcohol dehydrogenase/reductase 110C-MS3, OsSDR110C family member MS3 description:Similar to Stem secoisolariciresinol dehydrogenase (Fragment). (Os04t0405300-01)
Sequence	AACTTACTCAGAGAGTCGCAGATCGAGAGAGCTAACGATTTCTCATCTCGCGGTGGCCAT GGCGGGTAGCAGCTACGGCGACGTTCATGAGTCTGCAAGAAAGTTGGTGGGCAAGGTGGC GCTGATCACCGGCGGCGCGAGCGGCATCGGGGAGTGCACGGCGCGGCTGTTCGTGAAGCA CGGGGCGCAAGTCGTGGTCGCCGACATCCAGGACGAGGCGGGGGCGCGACTGTGCGCCGA GCTCGGGAGCGCCACCGCCAGCTACGTGCGGTGCGACGTGACGAGCGAGGACGACGTCGC GGCCGCGGTGGACCACGCCGTGGCGAGGTACGGGAAGCTGGACGTCATGTTCAACAACGC CGGGATCGGCGGCGCGGCGTGCCACAGCATCCTGGAGAGCACCAAGGCCGACTTTGACCG CGTGCTGGCCGTGAACCTGACGGGCCCGTTCCTGGGCACGAAGCACGCGGCGCGGGTGAT GGTGGCCGCGGGGCGCGGCGGGTGCATCATCGGGACGGCGAGCCTCGCGTCGGCGGTGGC CGGCACGGCGTCGCACGCGTACACGTGCGCCAAGCGCGCGCTGGTGGGGCTGACGGAGAA CGCGGCGGCGGAGCTGGGCCGCCACGGGATCCGCGTCAACTGCGTGTCGCCCGCCGCGGC GGCGACGCCGCTGGCCACGGGGTACGTGGGCCTGGAGGGGGAGGCGTTCGAGGCCGCCAT GGAGGCCGTGGCCAACCTCAAGGGCGTGCGCCTCCGCGTGGAGGACATCGCCGCCGCCGT GCTGTTCCTCGCCAGCGACGACGCGCGCTACGTCAGCGGCCACAACCTGCTCATCGACGG CGGCTGCTCCATCGTCAACCCGTCCTTTGGCATCTTCAAGGACTGAGACGATCGATCGGC TGGCCATGCATTGACAAAGATCGATCGACGCTGTCACGTTAGGCTTGTGTCACGATCGAC GCTGTCACAGTTTATGTTTGACTTATGTTCTTAATTTTTTTAAAAAATAAATTTTAAAAG GATGGACGATTAAAATTGAACACGAAAATTTATAT