Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0403200-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:19994477:19996158:1 gene:Os04g0403200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 23, SKIPa-interacting protein 23, SKIPa-interacting protein 23 description:Zinc finger, RING-type domain containing protein. (Os04t0403200-01)
Sequence	ATGGCCGTGCAGGCGCAGTACCTCTCCCACGCCTCCTTCCCCCACGACCTCTATGGCCTC AGGGCTCTGGAGGGTGCGACGGCGGCGGGTTCTTTGTTCTTGGACGACCACGGCGGGTGC GCGCCGGCGACTCCGGCGGCGGCCGCGGCTGGGATAGGGCACACGGTGCTGAGCGACCTT CCCCGGAGCGAGCTTACCTGCAACGACAATAACGGCGCGGGATACGGATTCGTGCCGAGG AAGAGGGCGCGCCTGGATGCGGATGAGTCGGCCGGGGCGTTGATGGCGGCGGCGGCGGCG CAGCAGCAGCGCATGGTTCTTCCGCCCCATGGCCTTGTCTTTCCCGGGGATGTGCAGAGC AGGGCGGTGGGTTGCGGCGCCGCGTCCACCAGCGGGAGGGCTGGCAATGCCGCCGGCCTC TCGCAGGGGCTCCTGTCTCAGCTCTATCATCAGGGTGTCGAGATCGACGCGCTCGTGCGA CTCGAGAGCGAGCGGATGCGTGCGGGGCTCGAGGAGGCTCGCCGGCGTCACGTACGGGCG GTGGTGTCCACCGTCGAGCGCGCCGCGGCCGGGCGTCTCCGTGCCGCGGAGGCCGAGCTC GAGCGCGCGCGGTGCCGCAACATGGAGCTCGAGGAGAGGCTGCGCCAGATGACCGCCGAG GGGCAGGCGTGGCTCAGCGTCGCCAAGAGCCACGAGGCCGTCGCCGCGGGGCTCCGCGCC ACCCTGGATCAGCTCCTCCAGTCACCCTGCGCCGCCCTTGCCGTTGCCGGCGCGGCCGGC GCCGGTGGCGCCGAGGGCGACGCCGAGGACGCGCAGTCCTGCTGCTACGAGACCCCGTGC GGTGGCGACAACGCCGGCGCGGATGACGCGGCGTCCAAGACCCCCGCCGCCGCGCTCTGC AAGGCGTGCGGCGCCGGCGAGGCGTCCATGCTGCTGCTCCCGTGCCGGCACCTCTGCCTG TGCCGCGGCTGCGAGGCCGCCGTCGACGCCTGCCCGGTGTGCGCGGCCACCAAGAACGCC TCGCTCCATGTCCTGCTGTCCTGA

Peptide Sequence

PEP ID	Os04t0403200-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:19994477:19996158:1 gene:Os04g0403200 transcript:Os04t0403200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 23, SKIPa-interacting protein 23, SKIPa-interacting protein 23 description:Zinc finger, RING-type domain containing protein. (Os04t0403200-01)
Sequence	MAVQAQYLSHASFPHDLYGLRALEGATAAGSLFLDDHGGCAPATPAAAAAGIGHTVLSDL PRSELTCNDNNGAGYGFVPRKRARLDADESAGALMAAAAAQQQRMVLPPHGLVFPGDVQS RAVGCGAASTSGRAGNAAGLSQGLLSQLYHQGVEIDALVRLESERMRAGLEEARRRHVRA VVSTVERAAAGRLRAAEAELERARCRNMELEERLRQMTAEGQAWLSVAKSHEAVAAGLRA TLDQLLQSPCAALAVAGAAGAGGAEGDAEDAQSCCYETPCGGDNAGADDAASKTPAAALC KACGAGEASMLLLPCRHLCLCRGCEAAVDACPVCAATKNASLHVLLS

Transcript Sequence

Transcript ID	Os04t0403200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:19994477:19996158:1 gene:Os04g0403200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 23, SKIPa-interacting protein 23, SKIPa-interacting protein 23 description:Zinc finger, RING-type domain containing protein. (Os04t0403200-01)
Sequence	TCCACGACTCCATCCGTTTTCCATTTCCACTCCTCCCCCCACCCAACTCACCATCGCCAT TCCTTCCCTCCTTCCACCGCTCCCTCTCTCTTCCATGGCCGTGCAGGCGCAGTACCTCTC CCACGCCTCCTTCCCCCACGACCTCTATGGCCTCAGGGCTCTGGAGGGTGCGACGGCGGC GGGTTCTTTGTTCTTGGACGACCACGGCGGGTGCGCGCCGGCGACTCCGGCGGCGGCCGC GGCTGGGATAGGGCACACGGTGCTGAGCGACCTTCCCCGGAGCGAGCTTACCTGCAACGA CAATAACGGCGCGGGATACGGATTCGTGCCGAGGAAGAGGGCGCGCCTGGATGCGGATGA GTCGGCCGGGGCGTTGATGGCGGCGGCGGCGGCGCAGCAGCAGCGCATGGTTCTTCCGCC CCATGGCCTTGTCTTTCCCGGGGATGTGCAGAGCAGGGCGGTGGGTTGCGGCGCCGCGTC CACCAGCGGGAGGGCTGGCAATGCCGCCGGCCTCTCGCAGGGGCTCCTGTCTCAGCTCTA TCATCAGGGTGTCGAGATCGACGCGCTCGTGCGACTCGAGAGCGAGCGGATGCGTGCGGG GCTCGAGGAGGCTCGCCGGCGTCACGTACGGGCGGTGGTGTCCACCGTCGAGCGCGCCGC GGCCGGGCGTCTCCGTGCCGCGGAGGCCGAGCTCGAGCGCGCGCGGTGCCGCAACATGGA GCTCGAGGAGAGGCTGCGCCAGATGACCGCCGAGGGGCAGGCGTGGCTCAGCGTCGCCAA GAGCCACGAGGCCGTCGCCGCGGGGCTCCGCGCCACCCTGGATCAGCTCCTCCAGTCACC CTGCGCCGCCCTTGCCGTTGCCGGCGCGGCCGGCGCCGGTGGCGCCGAGGGCGACGCCGA GGACGCGCAGTCCTGCTGCTACGAGACCCCGTGCGGTGGCGACAACGCCGGCGCGGATGA CGCGGCGTCCAAGACCCCCGCCGCCGCGCTCTGCAAGGCGTGCGGCGCCGGCGAGGCGTC CATGCTGCTGCTCCCGTGCCGGCACCTCTGCCTGTGCCGCGGCTGCGAGGCCGCCGTCGA CGCCTGCCCGGTGTGCGCGGCCACCAAGAACGCCTCGCTCCATGTCCTGCTGTCCTGAGA GCCAGCCTGGCCCGCGTCGCGCGTGGCCAAGCTCCTCGTCGTCGTCGTCGTCTTCCCCCA ACCTCTCGGCCGCTCTGGCGCGCCACGGCGGCACGGCACGTGCGTCACCCCACCCATGTG ATCTTGGCGGACACTGAGCTTTTGTTGCACGCCAGTAGAAGTCACCCACAAAGTTGCATC TAGTTTAGGTTAAATCCTCTTTTGTTATTACCTGTAGGTTTACCTGTCAATGTAATCAGC TAACCCTACTTTGCTGTCCATAACCCTTCACCCCCTTCTACATGATTAGCCCCAACTTTT TTGTGGTAAAGAAAACCCCCGATTGTATTCTCGATGAAATACATGCATGCACCAGGTCTA GCCTTAAA