Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0401700-03
CDS Infomation	cds chromosome:IRGSP-1.0:4:19887940:19892333:1 gene:Os04g0401700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 1 description:Potassium transporter, Potassium mediated growth, Salt tolerance (Os04t0401700-01);Similar to Isoform 2 of Potassium transporter 1. (Os04t0401700-02);Potassium transporter 1 (OsHAK1). Splice isoform 2. (Os04t0401700-03)
Sequence	ATGTCGTCGGCGCTGGAGGTGGAGGGCTCGGGCTCGCCGGGCGTCGAGCCGGCGGCGACG GCGACGGCGAGCAGGCTGAAGCGGCACGACTCGCTGTTCGGAGACGCGGAGAAGGTGAGC GGCGGGAAGCACCACGGGGGGTCGGCGGTGAGCTGGGCGGTGACGCTGCACCTGGCGTTC CAGAGCGTGGGCATCATCTACGGCGACATCGGCACGTCGCCGCTGTACGTCTACTCCAGC ACGTTCCCGGACGGCATCGGCCACCGCGACGACCTCGTCGGCGTCCTCTCCCTCATCCTC TACACCCTCATCATCATCCCCATGCTCAAGTACGTCTTCATCGTCCTCTACGCCAACGAC AATGGCGACGGTGGCACGTTCGCGCTCTACTCGCTGATCTCCCGGTACGCCAAGATCAGG ATGATCCCGAACCAGCAGGCGGAGGACGCCATGGTGTCCAACTACAGCATCGAGGCGCCC AGCTCGCAGCTGAGGAGGGCGCAGTGGGTGAAGCACAAGCTCGAGAGCAGCCGTGCCGCC AAGATGGCGCTCTTCTTCCTCACCATCCTCGGCACCTCCATGGTCATGGGCGACGGCACC TTGACCCCCGCCATCTCCGTGCTCTCTGCGGTGAGCGGGATCAGGGAGAAAGCTCCAAAC TTGACTCAGACGCAAGTCGTGCTGATCTCGGTGGCCATCCTGTTCATGCTCTTCTCCGTC CAGCGGTTCGGCACCGACAAGGTCGGCTACACCTTCGCCCCGATCATCTCGGTGTGGTTC CTCCTCATCGCCGGCATCGGGCTGTACAACCTCGTCGTCCACGAGATCACCATCCTCAAG GCCTTCAATCCGTGGTACATCGTGCAGTACTTCAGGAGGAACGGCAAGAAGGGTTGGGTG TCTCTCGGTGGCGTCGTCCTCTGTGTCACAGGCACAGAGGGAATGTTTGCCGACCTGGGC CATTTCAACATCAGGGCCGTGCAGATCAGCTTCAACTGCATCCTGTTCCCATCGGTGGCG CTCTGCTACATCGGGCAGGCAGCGTACCTGAGGAAATTCCCTGAGAATGTCAGTGACACC TTCTACAAATCCATCCCAGGGCCGCTGTTCTGGCCGACGTTCATCGTCGCGATCCTCGCC GCCATCATCGCCAGCCAGGCCATGCTCTCCGGCGCGTTTGCCATCCTCTCCAAGGCGCTG TCCCTCGGGTGCTTGCCCAGGGTCCGGGTGATCCACACCTCTAAGAAGTACGAGGGGCAG GTGTACATCCCCGAGGTGAACTTCATGATGGGTCTCGCCAGCATCATCGTCACCATCGCC TTCAGGACCACCACCAGCATCGGCAACGCCTACGGGATCTGTGTGGTGACGACGTTCATG GTGACGACGCACCTGATGACGGTGGTGATGCTGCTGATATGGAAGAAGCACCTGGTGTTC ATCCTGCTCTTCTACTGCGTGTTCGGGTTCACGGAGGTGGTGTACCTGTCGTCGATCCTG TCCAAGTTCGTGGACGGCGGGTACCTCCCCTTCTGCTTCGCCATGGTGCTGATGACGATG ATGGCGACGTGGCACTACGTCCACGTGCGGCGCTACTGGTACGAGCTGGACCACATCGTC CCCACGGCGGAGCTGGCGTCGCTGCTGGAGGAGAACGGCGGCGTGCGGCGGGTCCCCGGC GTGGGCCTCCTCTACACGGAGCTCGTCCAGGGCATCCCGCCGCTGTTCCCGCGCCTCGTC CGCAAGATCCCCTCGGTCCACGCCGTCTTCGTCTTCATCTCCATCAAGCACCTCCCCATC CCGCACGTCGCCGCCGCCGAGCGCTTCCTGTTCCGCCAGGTCGGCCCCCGCGCCCGCCGC GTCTTCCGCTGCGTCGCCCGCTACGGCTACACCGACGCCCTCGAGGAGCCCCGGGAGTTC GCCGCCTTCCTCGTCGACGGCCTCAAGATGTTCATCCAGGAGGAGTCCGCCTTCGCTCCT CATCAAGAGATGATCGATGCCGCCGCCGACGACGACGACGAGGCGGCGGCGAGGCCGAGG CGGTCGACGAGCTCGGCCGTGCACAGCGAGGAGGCGATCCAGGCGGCGTCGTCGGGGAGG ACGACGGCCAGCAGCGTCCAGCTCCAGGCGGGCGGCGAGCCGCCGGCGGCGATGGACGTG GAGGAGGAGAAGCGGCTGATCGACAGGGAGGTGGGCCGCGGCGTGGTGTACCTGATGGGC GAGGCCAACGTGTCGGCGGGGCCCAACTCGTCCATCCTCAAGAGGATCGCGGTGAACTAC ATCTACACCTTCCTGAGGAAGAACCTGACAGAAGGGCACAGGGCACTGGCGATTCCAAAC GATCAGCTGCTCAAGGTTGGGATCACGTATGAAATCTAG

Peptide Sequence

PEP ID	Os04t0401700-03
PEP Infomation	pep chromosome:IRGSP-1.0:4:19887940:19892333:1 gene:Os04g0401700 transcript:Os04t0401700-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 1 description:Potassium transporter, Potassium mediated growth, Salt tolerance (Os04t0401700-01);Similar to Isoform 2 of Potassium transporter 1. (Os04t0401700-02);Potassium transporter 1 (OsHAK1). Splice isoform 2. (Os04t0401700-03)
Sequence	MSSALEVEGSGSPGVEPAATATASRLKRHDSLFGDAEKVSGGKHHGGSAVSWAVTLHLAF QSVGIIYGDIGTSPLYVYSSTFPDGIGHRDDLVGVLSLILYTLIIIPMLKYVFIVLYAND NGDGGTFALYSLISRYAKIRMIPNQQAEDAMVSNYSIEAPSSQLRRAQWVKHKLESSRAA KMALFFLTILGTSMVMGDGTLTPAISVLSAVSGIREKAPNLTQTQVVLISVAILFMLFSV QRFGTDKVGYTFAPIISVWFLLIAGIGLYNLVVHEITILKAFNPWYIVQYFRRNGKKGWV SLGGVVLCVTGTEGMFADLGHFNIRAVQISFNCILFPSVALCYIGQAAYLRKFPENVSDT FYKSIPGPLFWPTFIVAILAAIIASQAMLSGAFAILSKALSLGCLPRVRVIHTSKKYEGQ VYIPEVNFMMGLASIIVTIAFRTTTSIGNAYGICVVTTFMVTTHLMTVVMLLIWKKHLVF ILLFYCVFGFTEVVYLSSILSKFVDGGYLPFCFAMVLMTMMATWHYVHVRRYWYELDHIV PTAELASLLEENGGVRRVPGVGLLYTELVQGIPPLFPRLVRKIPSVHAVFVFISIKHLPI PHVAAAERFLFRQVGPRARRVFRCVARYGYTDALEEPREFAAFLVDGLKMFIQEESAFAP HQEMIDAAADDDDEAAARPRRSTSSAVHSEEAIQAASSGRTTASSVQLQAGGEPPAAMDV EEEKRLIDREVGRGVVYLMGEANVSAGPNSSILKRIAVNYIYTFLRKNLTEGHRALAIPN DQLLKVGITYEI

Transcript Sequence

Transcript ID	Os04t0401700-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:19887940:19892333:1 gene:Os04g0401700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HIGH-AFFINITY POTASSIUM(K+) TRANSPORTER 1 description:Potassium transporter, Potassium mediated growth, Salt tolerance (Os04t0401700-01);Similar to Isoform 2 of Potassium transporter 1. (Os04t0401700-02);Potassium transporter 1 (OsHAK1). Splice isoform 2. (Os04t0401700-03)
Sequence	ATATTATGCATGCATCAATTGCAAGCACCAAGAACCAAGAATCGATAGCATTTATGCTGC TGATTTACTAGGCAGCAAAGGAGGCCAAGGAAATCAATACAATCCTTTCTTGAGCATTTT AATCACTCCTCTCCCTTTGCTTAGCAACAAAGGATCCCATCTTCTTTGTAGACGTCAACA AAGATGCAGAGGATTTTGCTTGGTTTTTCACACCATCGCCGACCTCAGAATCAAAGCCAT TGACCGTGCAGGCTGCAGGAAGATCAGCAGCAAGCTAAGCTAGTAGCCTCCAAGGTGCCC GGAGATGTCGTCGGCGCTGGAGGTGGAGGGCTCGGGCTCGCCGGGCGTCGAGCCGGCGGC GACGGCGACGGCGAGCAGGCTGAAGCGGCACGACTCGCTGTTCGGAGACGCGGAGAAGGT GAGCGGCGGGAAGCACCACGGGGGGTCGGCGGTGAGCTGGGCGGTGACGCTGCACCTGGC GTTCCAGAGCGTGGGCATCATCTACGGCGACATCGGCACGTCGCCGCTGTACGTCTACTC CAGCACGTTCCCGGACGGCATCGGCCACCGCGACGACCTCGTCGGCGTCCTCTCCCTCAT CCTCTACACCCTCATCATCATCCCCATGCTCAAGTACGTCTTCATCGTCCTCTACGCCAA CGACAATGGCGACGGTGGCACGTTCGCGCTCTACTCGCTGATCTCCCGGTACGCCAAGAT CAGGATGATCCCGAACCAGCAGGCGGAGGACGCCATGGTGTCCAACTACAGCATCGAGGC GCCCAGCTCGCAGCTGAGGAGGGCGCAGTGGGTGAAGCACAAGCTCGAGAGCAGCCGTGC CGCCAAGATGGCGCTCTTCTTCCTCACCATCCTCGGCACCTCCATGGTCATGGGCGACGG CACCTTGACCCCCGCCATCTCCGTGCTCTCTGCGGTGAGCGGGATCAGGGAGAAAGCTCC AAACTTGACTCAGACGCAAGTCGTGCTGATCTCGGTGGCCATCCTGTTCATGCTCTTCTC CGTCCAGCGGTTCGGCACCGACAAGGTCGGCTACACCTTCGCCCCGATCATCTCGGTGTG GTTCCTCCTCATCGCCGGCATCGGGCTGTACAACCTCGTCGTCCACGAGATCACCATCCT CAAGGCCTTCAATCCGTGGTACATCGTGCAGTACTTCAGGAGGAACGGCAAGAAGGGTTG GGTGTCTCTCGGTGGCGTCGTCCTCTGTGTCACAGGCACAGAGGGAATGTTTGCCGACCT GGGCCATTTCAACATCAGGGCCGTGCAGATCAGCTTCAACTGCATCCTGTTCCCATCGGT GGCGCTCTGCTACATCGGGCAGGCAGCGTACCTGAGGAAATTCCCTGAGAATGTCAGTGA CACCTTCTACAAATCCATCCCAGGGCCGCTGTTCTGGCCGACGTTCATCGTCGCGATCCT CGCCGCCATCATCGCCAGCCAGGCCATGCTCTCCGGCGCGTTTGCCATCCTCTCCAAGGC GCTGTCCCTCGGGTGCTTGCCCAGGGTCCGGGTGATCCACACCTCTAAGAAGTACGAGGG GCAGGTGTACATCCCCGAGGTGAACTTCATGATGGGTCTCGCCAGCATCATCGTCACCAT CGCCTTCAGGACCACCACCAGCATCGGCAACGCCTACGGGATCTGTGTGGTGACGACGTT CATGGTGACGACGCACCTGATGACGGTGGTGATGCTGCTGATATGGAAGAAGCACCTGGT GTTCATCCTGCTCTTCTACTGCGTGTTCGGGTTCACGGAGGTGGTGTACCTGTCGTCGAT CCTGTCCAAGTTCGTGGACGGCGGGTACCTCCCCTTCTGCTTCGCCATGGTGCTGATGAC GATGATGGCGACGTGGCACTACGTCCACGTGCGGCGCTACTGGTACGAGCTGGACCACAT CGTCCCCACGGCGGAGCTGGCGTCGCTGCTGGAGGAGAACGGCGGCGTGCGGCGGGTCCC CGGCGTGGGCCTCCTCTACACGGAGCTCGTCCAGGGCATCCCGCCGCTGTTCCCGCGCCT CGTCCGCAAGATCCCCTCGGTCCACGCCGTCTTCGTCTTCATCTCCATCAAGCACCTCCC CATCCCGCACGTCGCCGCCGCCGAGCGCTTCCTGTTCCGCCAGGTCGGCCCCCGCGCCCG CCGCGTCTTCCGCTGCGTCGCCCGCTACGGCTACACCGACGCCCTCGAGGAGCCCCGGGA GTTCGCCGCCTTCCTCGTCGACGGCCTCAAGATGTTCATCCAGGAGGAGTCCGCCTTCGC TCCTCATCAAGAGATGATCGATGCCGCCGCCGACGACGACGACGAGGCGGCGGCGAGGCC GAGGCGGTCGACGAGCTCGGCCGTGCACAGCGAGGAGGCGATCCAGGCGGCGTCGTCGGG GAGGACGACGGCCAGCAGCGTCCAGCTCCAGGCGGGCGGCGAGCCGCCGGCGGCGATGGA CGTGGAGGAGGAGAAGCGGCTGATCGACAGGGAGGTGGGCCGCGGCGTGGTGTACCTGAT GGGCGAGGCCAACGTGTCGGCGGGGCCCAACTCGTCCATCCTCAAGAGGATCGCGGTGAA CTACATCTACACCTTCCTGAGGAAGAACCTGACAGAAGGGCACAGGGCACTGGCGATTCC AAACGATCAGCTGCTCAAGGTTGGGATCACGTATGAAATCTAGGCATTTGATACATCTGA TCTGATATCAAAGTATACATATATATGTGGGAAAAAAAATGAGCCTAGTATAAACCATGG GTTTTGTTGATGATGCTGATGTTGGAAGAGAGGGCAAAGTGCCTTTTTTGTTTGTTGAAT AAGTAGTTTCAGCTGAAAGTGTTGGCAGGCAGGGAGGGTTTGGTTTTTCTTTCGCCTCTG TACAGTGTGGTTTGTGTAAACGGCGTGTGCCAACTTGAGTAGAAGGTTTCTCA