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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0401100-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:19841573:19844276:-1 gene:Os04g0401100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0113L04.8 protein. (Os04t0401100-01)
Sequence

ATGCCAACGCTGATCATCACCGTGGACCTGCAGTGCTGCCGCTGCAACATCAAGATCCAG
AAAGTCCTCTGCTGCATGCAAGAGCGAGGCGAGTTGGAGATCGAGAAGATCGTGTACGAG
AAGGACACGGTGGTGGTGTCCGGCCCCTTCGACGCCGAGAAGCTCTCCTGCAAGCTGTGG
TGCAAGGCCGGCAAGATCATCAAGGACATCAAGATCAAGCCGCCGGAAGAGAAGAAGAAG
CCCGAACCCAAGCCCGATGAGAAGAAGCCCGATCCCAAGCCCAAGCCCGACCCATGCAAG
CTCATACCATTCCCGTACCCTTACGTGTACCCGCCGCCGCCGCCGTGCGGCGGCTGCGCC
ACCCCGCACTGCTGCGACTGCCACCCCAAGCCACCTCCGCCGGCGCCGGCGCCAGCGAAG
CCAGCGTGCGGCTGCCCGGCTTGGTCGTCGCCGTGCCACTGCTACCCGCCGCCGGCCATG
CCGCCGTACCCGCCGGTGCTCGTCTGCGACGAGGGCCCGCAGTACGGCGCCTGCGCCGTC
ATGTAG

Peptide Sequence

PEP ID

Os04t0401100-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:19841573:19844276:-1 gene:Os04g0401100 transcript:Os04t0401100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0113L04.8 protein. (Os04t0401100-01)
Sequence

MPTLIITVDLQCCRCNIKIQKVLCCMQERGELEIEKIVYEKDTVVVSGPFDAEKLSCKLW
CKAGKIIKDIKIKPPEEKKKPEPKPDEKKPDPKPKPDPCKLIPFPYPYVYPPPPPCGGCA
TPHCCDCHPKPPPPAPAPAKPACGCPAWSSPCHCYPPPAMPPYPPVLVCDEGPQYGACAV
M

Transcript Sequence

Transcript ID

Os04t0401100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:19841573:19844276:-1 gene:Os04g0401100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0113L04.8 protein. (Os04t0401100-01)
Sequence

ATGCACTACTTCATCATCATCTTTAATTAATTCGATCTCTCCGGGACTATCTATCTCCAT
TTCTCTCCAAGGCGAGCTCGCTCCTCACTCGATCGCCGTGTCGCAGTTCATCCTGACTAG
CTTCACTTCAGAAAGCTGCATATATATACAAAGATGCCAACGCTGATCATCACCGTGGAC
CTGCAGTGCTGCCGCTGCAACATCAAGATCCAGAAAGTCCTCTGCTGCATGCAAGAGCGA
GGCGAGTTGGAGATCGAGAAGATCGTGTACGAGAAGGACACGGTGGTGGTGTCCGGCCCC
TTCGACGCCGAGAAGCTCTCCTGCAAGCTGTGGTGCAAGGCCGGCAAGATCATCAAGGAC
ATCAAGATCAAGCCGCCGGAAGAGAAGAAGAAGCCCGAACCCAAGCCCGATGAGAAGAAG
CCCGATCCCAAGCCCAAGCCCGACCCATGCAAGCTCATACCATTCCCGTACCCTTACGTG
TACCCGCCGCCGCCGCCGTGCGGCGGCTGCGCCACCCCGCACTGCTGCGACTGCCACCCC
AAGCCACCTCCGCCGGCGCCGGCGCCAGCGAAGCCAGCGTGCGGCTGCCCGGCTTGGTCG
TCGCCGTGCCACTGCTACCCGCCGCCGGCCATGCCGCCGTACCCGCCGGTGCTCGTCTGC
GACGAGGGCCCGCAGTACGGCGCCTGCGCCGTCATGTAGCCAGCGCTGGTCATCTCCTTC
CCCGTTCATATATCCGTCCATGAATGTGTTCTTGAAAGTCTCACCGGACGTTTGTTATTA
TGAAGTTCATCACTTTGGGCTTTGATTGGGTGTGGGAGGATTGCTTATGTTTTTTAAGAT
GATGGAAATTAATATTACTCCATGTATTTAGAGAATGCTTTTATGTGATAATGTTAAGGA
AATAAATAATTGAGCTTAGTAGT