Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0395900-01
CDS Infomation	cds chromosome:IRGSP-1.0:4:19498820:19504766:-1 gene:Os04g0395900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polynucleotide adenylyltransferase region domain containing protein. (Os04t0395900-01)
Sequence	ATGGCGCTGCGCACGCCGGAGCTGCGCTTCGCCGCCGCGGCGGGGCTCGGGGCGCTCTCG CGCCCATCCCGCGTCGCGCCGTCCCCGCTCGCCGCGCTGGCGGCGCCGCGCCGGCGCAGG CGCCGCTCCCCGTCGCCCTCCCCCGCGCCCTCCGACTCCGACTCCAACCCCGCCTCCTCC GCCCCCGCGAACGCCGGTGGGGCGGCGGCGGCGGCGGAGGCGCCGGAGTGGAAGAAGGTG AGCGCGAAGCGGTTCGGGATCAAGGACTCCATGATCCCCGACGAGGCCTGGAACGTCCTC CACCGCCTCCGCAGCAGAGGATATGATGTCTACCTGGTTGGTGGTTGTGTTCGAGATCTC ATAATGAAGAAAACCCCAAAAGATTTTGACATAATAACCACAGCTGATCTTAGGCAGGTG AAAGACACTTTCTCAGGATCAGCTGTTATAGTAGGAAGGCGGTTCCCAATATGTCATGTA TATGAGAACAATTCAATTGTTGAGGTATCAAGTTTTAACACTTATGCACGAGGGTCAACT AGCAATCAAATTTACACGTCCAAGAGCCCCCATTGTAGCAAAAATGATTATATCCGATGG AAAAATTGCCAAGGGAGGGACTTCACTATAAACGGGTTAATGTTCAATCCATATGCAGAA AAGATCTACGACTACTTCGGAGGAATCGAGGATATTAAGAAAGCTAAGGTTCGTACCGTG ATTCCAGCTGGCACATCATTCCAGGAGGACTGTGCTCGTATTCTACGTGCAATCAGAATT GCAGCTCGTTTAGGGTTCAACTTTCCAAAAGAAACTGCTTATTATGTGCGAACTCTTGCC TGCTCTGTGGCAAGACTTGATAAGGGAAGAATACTCATGGAGATCAACTATATGCTTGCT TATGGTTCAGCTGAAGCTTCTTTAAGGTTGCTTTGGAGATTCGGTCTTCTTGAACACCTG CTGCCTTTTCAGGCAGCATATTTTTCTTCAACTCGTTTTAAGAGGAAGGATAAAGGAACT AACATGCTACTGGTCTTATTTTCTAAATTGGATAATTTTCTTGCTCCTAACAGGCCATGC CATAATAGTTTGTGGATAAGTATTTTAGCACTTCATGAAGCATTAGTACGCCAACCGCGT GATCCTTTAGTGGTAGCTACTTTTGCCCTAGCTCTATACCTTGGAGGTGATATGTCATTG GCACTAGATATTGGAAAATCAATCAACCGTCAACATAATACCGGATTTTCAGAGCTATTA GAACCCCAAGTCTGGGATGATAAGCATTTGGTAGGCGAGGTGCAAAGCCTAGCTGTCTCA ATGCGGCGGGCATTAACTGAAATGACTGATGAATATTTTGTTGCAAATGCTATGGCAAAA ATTCCTCAGGCACCATCCTCAGATCTTGTATTCATCCCACTACAAGCCTACCTAAAGGTT CTCAAATTAATTGAATGTGTTCAACATGGGAAAAAGGAGCATGGCTATGAACCGAAGAGA GATGGAAATATTGATTATCATGATCTATCTTATGGTACACCTGCAGAAGTAAGAAATGTC TTTACACTGGTCGTCTTCAACACATTATACCCCTCAAATACGGAGAATCAGCAGGATGTC AGCTCTTGA

Peptide Sequence

PEP ID	Os04t0395900-01
PEP Infomation	pep chromosome:IRGSP-1.0:4:19498820:19504766:-1 gene:Os04g0395900 transcript:Os04t0395900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polynucleotide adenylyltransferase region domain containing protein. (Os04t0395900-01)
Sequence	MALRTPELRFAAAAGLGALSRPSRVAPSPLAALAAPRRRRRRSPSPSPAPSDSDSNPASS APANAGGAAAAAEAPEWKKVSAKRFGIKDSMIPDEAWNVLHRLRSRGYDVYLVGGCVRDL IMKKTPKDFDIITTADLRQVKDTFSGSAVIVGRRFPICHVYENNSIVEVSSFNTYARGST SNQIYTSKSPHCSKNDYIRWKNCQGRDFTINGLMFNPYAEKIYDYFGGIEDIKKAKVRTV IPAGTSFQEDCARILRAIRIAARLGFNFPKETAYYVRTLACSVARLDKGRILMEINYMLA YGSAEASLRLLWRFGLLEHLLPFQAAYFSSTRFKRKDKGTNMLLVLFSKLDNFLAPNRPC HNSLWISILALHEALVRQPRDPLVVATFALALYLGGDMSLALDIGKSINRQHNTGFSELL EPQVWDDKHLVGEVQSLAVSMRRALTEMTDEYFVANAMAKIPQAPSSDLVFIPLQAYLKV LKLIECVQHGKKEHGYEPKRDGNIDYHDLSYGTPAEVRNVFTLVVFNTLYPSNTENQQDV SS

Transcript Sequence

Transcript ID	Os04t0395900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:19498820:19504766:-1 gene:Os04g0395900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polynucleotide adenylyltransferase region domain containing protein. (Os04t0395900-01)
Sequence	CTCCTCCTCTCCTCTCGCCGCCGCCGCCGCCGCCGGGATGGCGCTGCGCACGCCGGAGCT GCGCTTCGCCGCCGCGGCGGGGCTCGGGGCGCTCTCGCGCCCATCCCGCGTCGCGCCGTC CCCGCTCGCCGCGCTGGCGGCGCCGCGCCGGCGCAGGCGCCGCTCCCCGTCGCCCTCCCC CGCGCCCTCCGACTCCGACTCCAACCCCGCCTCCTCCGCCCCCGCGAACGCCGGTGGGGC GGCGGCGGCGGCGGAGGCGCCGGAGTGGAAGAAGGTGAGCGCGAAGCGGTTCGGGATCAA GGACTCCATGATCCCCGACGAGGCCTGGAACGTCCTCCACCGCCTCCGCAGCAGAGGATA TGATGTCTACCTGGTTGGTGGTTGTGTTCGAGATCTCATAATGAAGAAAACCCCAAAAGA TTTTGACATAATAACCACAGCTGATCTTAGGCAGGTGAAAGACACTTTCTCAGGATCAGC TGTTATAGTAGGAAGGCGGTTCCCAATATGTCATGTATATGAGAACAATTCAATTGTTGA GGTATCAAGTTTTAACACTTATGCACGAGGGTCAACTAGCAATCAAATTTACACGTCCAA GAGCCCCCATTGTAGCAAAAATGATTATATCCGATGGAAAAATTGCCAAGGGAGGGACTT CACTATAAACGGGTTAATGTTCAATCCATATGCAGAAAAGATCTACGACTACTTCGGAGG AATCGAGGATATTAAGAAAGCTAAGGTTCGTACCGTGATTCCAGCTGGCACATCATTCCA GGAGGACTGTGCTCGTATTCTACGTGCAATCAGAATTGCAGCTCGTTTAGGGTTCAACTT TCCAAAAGAAACTGCTTATTATGTGCGAACTCTTGCCTGCTCTGTGGCAAGACTTGATAA GGGAAGAATACTCATGGAGATCAACTATATGCTTGCTTATGGTTCAGCTGAAGCTTCTTT AAGGTTGCTTTGGAGATTCGGTCTTCTTGAACACCTGCTGCCTTTTCAGGCAGCATATTT TTCTTCAACTCGTTTTAAGAGGAAGGATAAAGGAACTAACATGCTACTGGTCTTATTTTC TAAATTGGATAATTTTCTTGCTCCTAACAGGCCATGCCATAATAGTTTGTGGATAAGTAT TTTAGCACTTCATGAAGCATTAGTACGCCAACCGCGTGATCCTTTAGTGGTAGCTACTTT TGCCCTAGCTCTATACCTTGGAGGTGATATGTCATTGGCACTAGATATTGGAAAATCAAT CAACCGTCAACATAATACCGGATTTTCAGAGCTATTAGAACCCCAAGTCTGGGATGATAA GCATTTGGTAGGCGAGGTGCAAAGCCTAGCTGTCTCAATGCGGCGGGCATTAACTGAAAT GACTGATGAATATTTTGTTGCAAATGCTATGGCAAAAATTCCTCAGGCACCATCCTCAGA TCTTGTATTCATCCCACTACAAGCCTACCTAAAGGTTCTCAAATTAATTGAATGTGTTCA ACATGGGAAAAAGGAGCATGGCTATGAACCGAAGAGAGATGGAAATATTGATTATCATGA TCTATCTTATGGTACACCTGCAGAAGTAAGAAATGTCTTTACACTGGTCGTCTTCAACAC ATTATACCCCTCAAATACGGAGAATCAGCAGGATGTCAGCTCTTGAAGATGAAACTCTTG GCGTGATCATGAATAATTCAGGGGTTTGCAGTGGATATGCTGCAGCCTACAGGCTGCAGC TTAGACCAAACATCACAGGGATGGCCTACTGAAGTAGCTTCCACATCTTGAATGGCTTGA GCTCCTTTATGAAATCACGGCAGAACAGCAGGTCAAATTGCTGGATATGTTGCTCAGGGT ATTATCTCATCTAGCATGATGGCTATGTCATCGGCCCAAGTGTACGGCATCAGTCCAGCT TGACAGAGCTTCAGGTTTTTTTTTTTTTGTGGCATACTTTCTTCTAAGGCTCTTTTTGGT TCCCTAGAATTTAAAGAAATGTGTTCCATTAACATTTCTACAAGCATTATAATCAATAGC AATTGCATTGTGAATTAAGG