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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0395800-01
CDS Infomation

cds chromosome:IRGSP-1.0:4:19492605:19497140:1 gene:Os04g0395800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TIFY GENE 9 description:Tify domain containing protein. (Os04t0395800-01)
Sequence

ATGTCGACGAGGGCGCCCGTCGAGCTCGACTTCCTCGGCCTCCGCGCCGCCGCCGCCGAC
GCCGACGACCGCCACGCCAAGAGCGGCGGCTCCTCCGCCTCCTCTTCCTCCTCCATCCGA
GGGATGGAGACGAGCGCGATAGCGAGGATAGGGCCCCACCTGCTGCGCCGCGTCATCGCC
GCCGCCGGACCTCCGCCACCGCCGTCGACGGCGCCGGTGCCGGAGGAGATGCCCGGCGCC
GCCGCCGCCGCCGCTCCGATGACGCTCTTCTACAACGGTTCAGTCGCCGTCTTCGACGTC
TCCCACGATAAGGCAGAGGCTATAATGAGGATGGCAACCGAGGCAACTAAAGCAAAAGGA
CTCGCTCGTGGCAATGCAATTGTAGGCAATTTTGCCAAAGAGCCACTCACAAGAACTAAA
TCTCTGCAACGATTCCTCTCCAAGAGAAAAGAGAGGTTGACCAGCTTGGGTCCGTACCAG
GTGGGTGGGCCCGCTGCCGTCGGTGCGACGACGTCGACCACCACCAAGTCTTTTCTTGCG
AAGGAAGAGGAGCACACGGCGTCCTAG

Peptide Sequence

PEP ID

Os04t0395800-01
PEP Infomation

pep chromosome:IRGSP-1.0:4:19492605:19497140:1 gene:Os04g0395800 transcript:Os04t0395800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TIFY GENE 9 description:Tify domain containing protein. (Os04t0395800-01)
Sequence

MSTRAPVELDFLGLRAAAADADDRHAKSGGSSASSSSSIRGMETSAIARIGPHLLRRVIA
AAGPPPPPSTAPVPEEMPGAAAAAAPMTLFYNGSVAVFDVSHDKAEAIMRMATEATKAKG
LARGNAIVGNFAKEPLTRTKSLQRFLSKRKERLTSLGPYQVGGPAAVGATTSTTTKSFLA
KEEEHTAS

Transcript Sequence

Transcript ID

Os04t0395800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:19492605:19497140:1 gene:Os04g0395800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TIFY GENE 9 description:Tify domain containing protein. (Os04t0395800-01)
Sequence

ATACGTGTTCTAGCTAAGCTAGCTAGCTAGCTCTCGTTCTCCGGCCATGTCGACGAGGGC
GCCCGTCGAGCTCGACTTCCTCGGCCTCCGCGCCGCCGCCGCCGACGCCGACGACCGCCA
CGCCAAGAGCGGCGGCTCCTCCGCCTCCTCTTCCTCCTCCATCCGAGGGATGGAGACGAG
CGCGATAGCGAGGATAGGGCCCCACCTGCTGCGCCGCGTCATCGCCGCCGCCGGACCTCC
GCCACCGCCGTCGACGGCGCCGGTGCCGGAGGAGATGCCCGGCGCCGCCGCCGCCGCCGC
TCCGATGACGCTCTTCTACAACGGTTCAGTCGCCGTCTTCGACGTCTCCCACGATAAGGC
AGAGGCTATAATGAGGATGGCAACCGAGGCAACTAAAGCAAAAGGACTCGCTCGTGGCAA
TGCAATTGTAGGCAATTTTGCCAAAGAGCCACTCACAAGAACTAAATCTCTGCAACGATT
CCTCTCCAAGAGAAAAGAGAGGTTGACCAGCTTGGGTCCGTACCAGGTGGGTGGGCCCGC
TGCCGTCGGTGCGACGACGTCGACCACCACCAAGTCTTTTCTTGCGAAGGAAGAGGAGCA
CACGGCGTCCTAGCTAGCCTCCTAGCTAGCTAATTACTGTTGATTTGGTCCCCTTGATTA
ATCGTTTATTATTAATAATTATTTCATTGATTCCATCATTAGTAGAGGGTACAGACCAGG
CAGGGGCCAGTTAATAATCCTGTTTAGTGTTGATCGATCGATAGATTAACCATACTCCAT
ATGTAGGTCTGTGTGTAATATTGATTTATATATATAGTAGTATCTATAGTTGATTACAAG
GTCATGGATTTTATGGATGTGTAAAGCAAGCTTAGAGTGAATATTGGATGCATTTATGAT
TTATACTATGTAGTTGTAC