Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os04t0395700-00
CDS Infomation

cds chromosome:IRGSP-1.0:4:19479857:19484468:-1 gene:Os04g0395700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0395700-00)
Sequence

ATGGCGGCCACCGACGAGGCACCCGCCACCGACCCCGCGCCCGCGCCCTCGCCCTCGCCG
GCAAAGCGCAAGCCCGACGCCGAGGCCACCGACCTCGCCCCGCTCGACCCGCCACCCAAG
TCCGCCCGCCCCGACGCCGACGAGGCCGCCGCCGAGGAGGCCGCCAGGGCGCGGGCTGCG
GACAAGGGGAAGGGGAAGATGGTGGTCGAGGACGAGGACGAGGAGGAGGAGGAGGGCGGC
GGCAGCGACGAGGACAGCAGCGACGACGACGACGACGACGACGACGACGACGACGACGAG
GAAGGTGGGGGAGGCGGCGGCGGCGGTGGCGGGGACGACAGCGACGACGGGTTCTGCGAC
GACCCGCTGGCCGAGGTCGACCTCAACAACATCCTCCCCTCGCGGACCCGCCGCCGCGCG
CCACCGCAGCCCGGGGCCTACTTGGTGCCGCCGGAGGAGGCCGCGGAGGACGACGACGAC
GAGGACGCCGACGTCGACGTCGACATGGCTCGCGGCCACCAGGCCGGGGACGGGGGAGGA
CAGCGATTAGGCTTCTCTCGGCTCAACAGTCTCGCTAGGGAAGAAATGGTGGTTGCCGGT
GCTAGGATATTACTACCTGTAGGGAGACGGTCTTGGATAACCTGA

Peptide Sequence

PEP ID

Os04t0395700-00
PEP Infomation

pep chromosome:IRGSP-1.0:4:19479857:19484468:-1 gene:Os04g0395700 transcript:Os04t0395700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0395700-00)
Sequence

MAATDEAPATDPAPAPSPSPAKRKPDAEATDLAPLDPPPKSARPDADEAAAEEAARARAA
DKGKGKMVVEDEDEEEEEGGGSDEDSSDDDDDDDDDDDDEEGGGGGGGGGGDDSDDGFCD
DPLAEVDLNNILPSRTRRRAPPQPGAYLVPPEEAAEDDDDEDADVDVDMARGHQAGDGGG
QRLGFSRLNSLAREEMVVAGARILLPVGRRSWIT

Transcript Sequence

Transcript ID

Os04t0395700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:4:19479857:19484468:-1 gene:Os04g0395700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os04t0395700-00)
Sequence

ACCATCTCGGCGTCTCCCCCTCTTCCTCTTCCTCTCCTCCTTCCTCGCGTCGCTCGCGCT
GTCTCCTTGAACCCTAGCTCTCCCCTCCGCGATGGCGGCCACCGACGAGGCACCCGCCAC
CGACCCCGCGCCCGCGCCCTCGCCCTCGCCGGCAAAGCGCAAGCCCGACGCCGAGGCCAC
CGACCTCGCCCCGCTCGACCCGCCACCCAAGTCCGCCCGCCCCGACGCCGACGAGGCCGC
CGCCGAGGAGGCCGCCAGGGCGCGGGCTGCGGACAAGGGGAAGGGGAAGATGGTGGTCGA
GGACGAGGACGAGGAGGAGGAGGAGGGCGGCGGCAGCGACGAGGACAGCAGCGACGACGA
CGACGACGACGACGACGACGACGACGACGAGGAAGGTGGGGGAGGCGGCGGCGGCGGTGG
CGGGGACGACAGCGACGACGGGTTCTGCGACGACCCGCTGGCCGAGGTCGACCTCAACAA
CATCCTCCCCTCGCGGACCCGCCGCCGCGCGCCACCGCAGCCCGGGGCCTACTTGGTGCC
GCCGGAGGAGGCCGCGGAGGACGACGACGACGAGGACGCCGACGTCGACGTCGACATGGC
TCGCGGCCACCAGGCCGGGGACGGGGGAGGACAGCGATTAGGCTTCTCTCGGCTCAACAG
TCTCGCTAGGGAAGAAATGGTGGTTGCCGGTGCTAGGATATTACTACCTGTAGGGAGACG
GTCTTGGATAACCTGATTGCCGAACGTTCTGTAGTCGTTAGAGCTCTGTCACCATGGTTT
TTCAGCATCGTTAACAGGTTATTTGGACTCCTAAAAGGAGGCGCGACTAGTACTTTTTCG
TGATTTCAAAGAGTTGTCGACGAGTATGCTGTGATCATGGTTGAACAGCTAACATCTCTT
TTGTATACATTGCACTTCCAGTTCCTGGTGACTGTTAACTTTCTCCTTAGTTGATTTAAC
CCTGCATTGACATGATGCAGTTCTCC