Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os04t0394200-03
CDS Infomation	cds chromosome:IRGSP-1.0:4:19378392:19382689:1 gene:Os04g0394200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 2-oxoglutarate dehydrogenase E2 subunit. (Os04t0394200-01);Similar to 2-oxoglutarate dehydrogenase E2 subunit. (Os04t0394200-02);Similar to 2-oxoglutarate dehydrogenase E2 subunit. (Os04t0394200-03)
Sequence	ATGGCGTCCCGCATCGCCTCTCGCCTCCTCCGCCGCTCCAACGCGACTCTAGGCCTCATC AGGAGTTATTCACATGCCAGGAACTACAGCAGTCAACTTTCAGCTCTTATTCCAATTGGT TCCCAGAGCTCAAAGCTTACAAGAAGACGCTATTACTTGCCAAATGCCTCTCCGTACCAA CTCTGGAGTAGGTCATTTGCATCTGACAATGGAGACCAGGTTGAAGCTGTTGTCCCTTTC ATGGGTGAATCTGTAACTGATGGAACTCTTGCTAACTTCTTGAAGAAACCTGGTGACAGA GTTGAGGCTGATGAGCCCATAGCACAGATTGAAACTGATAAGGTTACTATAGATGTTGCT AGTCCGGAAGCTGGTGTTATTGAAAAGTTCATTGCTAGCGAAGGTGATACTGTTACTCCA GGCACCAAAGTTGCTATCATATCAAAGTCTGCGGCACCAGCTGAAACACATGTTGCTCCG TCTGAGGATTCAACCCCAAAAGAAACGCCTCCAAAAGCTGAGGAGACAAAACCAAAATTA GAAGAGAAGTCACCAAAAGCAGAACCTCCCAAGATGCCTCTGCCACCCAAAACCTCCCCT ACAGAACCACAGCTCCCTCCAAAAGAACGAGAACGGAGGGTGCCAATGCCAAGGCTCAGG AAGCGTATTGCAAACCGTTTGAAGGATTCACAAAACACATTTGCAATGCTGACCACATTT AATGAAGTTGACATGACTAATTTGATGAAGCTGCGGTCTGATTATAAGGATGAGTTTGTC ACCAAGCACGGTGTCAAATTGGGTCTGATGTCCTGCTTTGTCAAGGCTGCTGTTACAGCA CTTCAAAACCAACCAATTGTCAATGCTGTCATTGATGGTGATGACATCATATACAGAGAC TATGTTGACATCAGTGTTGCTGTTGGTACTTCCAAGGGTCTTGTGGTGCCTGTTATCCGA GATGCTGATAACATGAACTTTGCGGACATTGAGAAAGGGATAAACGCCCTTGCAAAGAAG GCTACTGAGGGGGCACTCTCAATTGATGAGATGGCAGGAGGAACATTCACCATCTCTAAC GGTGGTGTTTACGGAAGCCTTATCAGCACACCTATCATCAACCCCCCACAGTCTGCTATT CTTGGAATGCACTCCATTGTACAACGCCCTGTGGTCGTGGACGGCAACATTCTCGCGAGG CCAATGATGTACCTTGCGCTGACATATGACCACAGGCTGATCGACGGCAGAGAAGCTGTC TACTTCCTGCGCCGCATCAAGGACGTGGTTGAAGACCCACGGAGATTGCTCCTCGACATA TAA

Peptide Sequence

PEP ID	Os04t0394200-03
PEP Infomation	pep chromosome:IRGSP-1.0:4:19378392:19382689:1 gene:Os04g0394200 transcript:Os04t0394200-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 2-oxoglutarate dehydrogenase E2 subunit. (Os04t0394200-01);Similar to 2-oxoglutarate dehydrogenase E2 subunit. (Os04t0394200-02);Similar to 2-oxoglutarate dehydrogenase E2 subunit. (Os04t0394200-03)
Sequence	MASRIASRLLRRSNATLGLIRSYSHARNYSSQLSALIPIGSQSSKLTRRRYYLPNASPYQ LWSRSFASDNGDQVEAVVPFMGESVTDGTLANFLKKPGDRVEADEPIAQIETDKVTIDVA SPEAGVIEKFIASEGDTVTPGTKVAIISKSAAPAETHVAPSEDSTPKETPPKAEETKPKL EEKSPKAEPPKMPLPPKTSPTEPQLPPKERERRVPMPRLRKRIANRLKDSQNTFAMLTTF NEVDMTNLMKLRSDYKDEFVTKHGVKLGLMSCFVKAAVTALQNQPIVNAVIDGDDIIYRD YVDISVAVGTSKGLVVPVIRDADNMNFADIEKGINALAKKATEGALSIDEMAGGTFTISN GGVYGSLISTPIINPPQSAILGMHSIVQRPVVVDGNILARPMMYLALTYDHRLIDGREAV YFLRRIKDVVEDPRRLLLDI

Transcript Sequence

Transcript ID	Os04t0394200-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:4:19378392:19382689:1 gene:Os04g0394200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 2-oxoglutarate dehydrogenase E2 subunit. (Os04t0394200-01);Similar to 2-oxoglutarate dehydrogenase E2 subunit. (Os04t0394200-02);Similar to 2-oxoglutarate dehydrogenase E2 subunit. (Os04t0394200-03)
Sequence	ATTCCCCTTCTCCTTCCCCAAACACGGTGTGGTCTGCACGCGACTCCTCCCCCCTCCGCC GCCGCCGCCGCCGCAGCGAGACCCCGGCGAATGGCGTCCCGCATCGCCTCTCGCCTCCTC CGCCGCTCCAACGCGACTCTAGGCCTCATCAGGAGTTATTCACATGCCAGGAACTACAGC AGTCAACTTTCAGCTCTTATTCCAATTGGTTCCCAGAGCTCAAAGCTTACAAGAAGACGC TATTACTTGCCAAATGCCTCTCCGTACCAACTCTGGAGTAGGTCATTTGCATCTGACAAT GGAGACCAGGTTGAAGCTGTTGTCCCTTTCATGGGTGAATCTGTAACTGATGGAACTCTT GCTAACTTCTTGAAGAAACCTGGTGACAGAGTTGAGGCTGATGAGCCCATAGCACAGATT GAAACTGATAAGGTTACTATAGATGTTGCTAGTCCGGAAGCTGGTGTTATTGAAAAGTTC ATTGCTAGCGAAGGTGATACTGTTACTCCAGGCACCAAAGTTGCTATCATATCAAAGTCT GCGGCACCAGCTGAAACACATGTTGCTCCGTCTGAGGATTCAACCCCAAAAGAAACGCCT CCAAAAGCTGAGGAGACAAAACCAAAATTAGAAGAGAAGTCACCAAAAGCAGAACCTCCC AAGATGCCTCTGCCACCCAAAACCTCCCCTACAGAACCACAGCTCCCTCCAAAAGAACGA GAACGGAGGGTGCCAATGCCAAGGCTCAGGAAGCGTATTGCAAACCGTTTGAAGGATTCA CAAAACACATTTGCAATGCTGACCACATTTAATGAAGTTGACATGACTAATTTGATGAAG CTGCGGTCTGATTATAAGGATGAGTTTGTCACCAAGCACGGTGTCAAATTGGGTCTGATG TCCTGCTTTGTCAAGGCTGCTGTTACAGCACTTCAAAACCAACCAATTGTCAATGCTGTC ATTGATGGTGATGACATCATATACAGAGACTATGTTGACATCAGTGTTGCTGTTGGTACT TCCAAGGGTCTTGTGGTGCCTGTTATCCGAGATGCTGATAACATGAACTTTGCGGACATT GAGAAAGGGATAAACGCCCTTGCAAAGAAGGCTACTGAGGGGGCACTCTCAATTGATGAG ATGGCAGGAGGAACATTCACCATCTCTAACGGTGGTGTTTACGGAAGCCTTATCAGCACA CCTATCATCAACCCCCCACAGTCTGCTATTCTTGGAATGCACTCCATTGTACAACGCCCT GTGGTCGTGGACGGCAACATTCTCGCGAGGCCAATGATGTACCTTGCGCTGACATATGAC CACAGGCTGATCGACGGCAGAGAAGCTGTCTACTTCCTGCGCCGCATCAAGGACGTGGTT GAAGACCCACGGAGATTGCTCCTCGACATATAAACTCCGCGCGCGCCACCAATCGCAGCC TGAGAGCTGCTTTGTGCTTTGTCTGGAAAATAATACTGCAAATTTTTGACTGATACAAAG AGTTGCTTTTCTGAGAAAGACGAAATTTGAGTTGAGGATACCGTGAGGGGGTCTCTCTGA CAATTATAGACGAGAGCACCAAATCCGAATCTTAAATCTTATATATCAGCGCTTATTCCA TTTTGGGATGTAGTTCCCTAAACAATTTGCTTTTAGTTTCAATGCAAGAGCAATAGATCA TGCATTTTTTGTTTG